RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 HAT1O14929 419 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 CACNG3O60359 315 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 TLR5O60602 858 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 FKBP9O95302 570 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 GDF5P43026 501 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 ZFP36L2P47974 494 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 ISL1P61371 349 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 FOXM1Q08050 763 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 SLAMF1Q13291 335 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 LETMD1Q6P1Q0 360 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 DLEU7Q6UYE1 221 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 SLC51BQ86UW2 128 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 OR4K2Q8NGD2 314 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 RBM4BQ9BQ04 359 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 APOL5Q9BWW9 433 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 OPTCQ9UBM4 332 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 GOLGA4Q13439 2230 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 MYLKQ15746 1914 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 MTRF1O75570 445 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 SMIM10L2AP0DMW4 78 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 SMIM10L2BP0DMW5 78 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 UROSP10746 265 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 CYP2A7P20853 494 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 ERVPABLB-1P60509 514 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 EFEMP1Q12805 493 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 TOP3AQ13472 1001 aaPredicted RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 ZNF235Q14590 738 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 TIGD5Q53EQ6 642 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 ZRANB3Q5FWF4 1079 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 BHLHA9Q7RTU4 235 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 GPSM1Q86YR5 675 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 OR56A4Q8NGH8 313 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 CDC26Q8NHZ8 85 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 PCNPQ8WW12 178 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 LINGO1Q96FE5 620 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 MSANTD3Q96H12 275 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 TRNT1Q96Q11 434 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 USE1Q9NZ43 259 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 TPRKBQ9Y3C4 175 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 PCDHB14Q9Y5E9 798 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 FAM92AA1XBS5 289 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 F8W810 466 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 CXCR6O00574 342 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 TULP3O75386 442 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 DCTP40126 519 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 SPANXN4Q5MJ08 99 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 CFAP52Q8N1V2 620 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 RTL3Q8N8U3 475 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 PAPD5Q8NDF8 572 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 OR8H1Q8NGG4 311 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 FUBP1Q96AE4 644 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 IMP4Q96G21 291 aaKnown RBP13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 CHCHD6Q9BRQ6 235 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 MMP27Q9H306 513 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 RNF167Q9H6Y7 350 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 HSPB11Q9Y547 144 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 GMPPBQ9Y5P6 360 aa13.85□□□□□ -0.19
PCDHB3-201ENST00000231130 DNAJC25-GNG10A0A024R161 153 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 SLC12A8A0AV02 714 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 TYW5A2RUC4 315 aaKnown RBP13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 ARHGAP33O14559 1287 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 KERAO60938 352 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 LRATO95237 230 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 IGFBP5P24593 272 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 ACVRL1P37023 503 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 ZFAND4Q86XD8 727 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 ST6GAL2Q96JF0 529 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 AIFM2Q9BRQ8 373 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 MRM3Q9HC36 420 aaKnown RBP13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 A0A1W2PQH9 124 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 ELOVL7A1L3X0 281 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 HHLA1C9JL84 531 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 PLK4O00444 970 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 GPR182O15218 404 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 AKR7A2O43488 359 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 PAPSS2O95340 614 aaPredicted RBP13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 MMP3P08254 477 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 CCNYL3P0C7X3 344 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 MSL3P1P0C860 447 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 IL7P13232 177 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 GGT1P19440 569 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 EFNA1P20827 205 aaPredicted RBP13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 IL32P24001 234 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 PKLRP30613 574 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 LHX1P48742 406 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 TP53BP2Q13625 1128 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 TAF12Q16514 161 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 IDO2Q6ZQW0 420 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 LRRTM3Q86VH5 581 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 PEX13Q92968 403 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 BTN2A3PQ96KV6 586 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 C8orf48Q96LL4 319 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 Q96MT0 163 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 RPRD1AQ96P16 312 aaPredicted RBP13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 SYTL2Q9HCH5 934 aa13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 EXOSC4Q9NPD3 245 aaKnown RBP13.84□□□□□ -0.19
PCDHB3-201ENST00000231130 FARSBQ9NSD9 589 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms