RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 NCSTNQ92542 709 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 C19orf25Q9UFG5 118 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 TAC3Q9UHF0 121 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 GABRQQ9UN88 632 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 TPST2O60704 377 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 GPIP06744 558 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 JMJD7P0C870 316 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 MAGEA11P43364 429 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 COL9A3Q14050 684 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 TOR1AIP1Q5JTV8 583 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 ATG14Q6ZNE5 492 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 ADAM7Q9H2U9 754 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 MBD2Q9UBB5 411 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 NCDNQ9UBB6 729 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 SLIT2O94813 1529 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 GADD45GO95257 159 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 SLC25A36Q96CQ1 311 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 CIB1Q99828 191 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 TPK1Q9H3S4 243 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 MOCS1Q9NZB8 636 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 MARK1Q9P0L2 795 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 CLEC4AQ9UMR7 237 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 ZNF208O43345 1280 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 SNTA1Q13424 505 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 MAPK14Q16539 360 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 UBAP2Q5T6F2 1119 aaKnown RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 CRELD2Q6UXH1 353 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 IQCKQ8N0W5 287 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 DEFB119Q8N690 84 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 GTPBP3Q969Y2 492 aaKnown RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 RELTQ969Z4 430 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 BHLHE41Q9C0J9 482 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 PCDHGB5Q9Y5G0 923 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 CFAP20Q9Y6A4 193 aaKnown RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 C2orf71A6NGG8 1288 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 WRBO00258 174 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CLDN7O95471 211 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 THRBP10828 461 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CCINQ13939 588 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 GFOD2Q3B7J2 385 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 Q8N9G6 341 aaPredicted RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CDH22Q9UJ99 828 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 KCNK6Q9Y257 313 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 J3KR12 359 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 GNB5O14775 395 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 SLC30A4O14863 429 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 PAPSS2O95340 614 aaPredicted RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 ADARP55265 1226 aaKnown RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 ARF5P84085 180 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 OR4E2Q8NGC2 313 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 HAVCR1Q96D42 359 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 PIWIL1Q96J94 861 aaKnown RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CLPTM1LQ96KA5 538 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CAMK1GQ96NX5 476 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 LENG8Q96PV6 779 aaPredicted RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 OR51V1Q9H2C8 321 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 C12orf65Q9H3J6 166 aaKnown RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 SDHAF3Q9NRP4 125 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 ANKRD66B4E2M5 251 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CDC7O00311 574 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 CXCR6O00574 342 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 AKAP8O43823 692 aaKnown RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 PRPS1L1P21108 318 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 BTN3A2P78410 334 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 DLG1Q12959 904 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 NCBP2-AS2Q69YL0 99 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 PDE12Q6L8Q7 609 aaKnown RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 LRRC70Q7Z2Q7 622 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 OR4K17Q8NGC6 315 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 SLC32A1Q9H598 525 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 NOX1Q9Y5S8 564 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 RPL10P27635 214 aaKnown RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 PRDX6P30041 224 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 DUSP3P51452 185 aaPredicted RBP18.55■□□□□ 0.56
SMPD3-201ENST00000219334 PDSS1Q5T2R2 415 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 FAM131AQ6UXB0 335 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 P2RY13Q9BPV8 354 aa18.55■□□□□ 0.56
SMPD3-201ENST00000219334 hCG_2039718K7EN88 272 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 GSC2O15499 205 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 CDCA2Q69YH5 1023 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 RNF19BQ6ZMZ0 732 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 TDRPQ86YL5 185 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 OR2L5Q8NG80 312 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 KDELR3O43731 214 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 COQ9O75208 318 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 SNAI1O95863 264 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 C9P02748 559 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 CBSLP0DN79 551 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 CBSP35520 551 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 TTYH3Q9C0H2 523 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 WASHC1A8K0Z3 465 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 WASH3PC4AMC7 463 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 CLEC3AO75596 197 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 NADKO95544 446 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-201ENST00000219334 WASH2PQ6VEQ5 465 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 HFE2Q6ZVN8 426 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 MEIOBQ8N635 442 aa18.54■□□□□ 0.56
SMPD3-201ENST00000219334 RBM15BQ8NDT2 890 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms