RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CACHD1Q5VU97 1274 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 FRG2Q64ET8 278 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 TLDC1Q6P9B6 456 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 LAYNQ6UX15 382 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 UNC5DQ6UXZ4 953 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 RNF111Q6ZNA4 994 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 TMEM126BQ8IUX1 230 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC15A3Q8IY34 581 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 FAM9CQ8IZT9 166 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 HDDC3Q8N4P3 179 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 OXR1Q8N573 874 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 PLA2G15Q8NCC3 412 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 SMRP1Q8NCR6 262 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 SELENOMQ8WWX9 145 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 PYCR2Q96C36 320 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 DUS3LQ96G46 650 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 FRG2BQ96QU4 278 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 TEX101Q9BY14 249 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 ATG10Q9H0Y0 220 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF576Q9H609 170 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 C6orf203Q9P0P8 240 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNHIT2Q9UHR6 403 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 POLR3HQ9Y535 204 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 C15orf38-AP3S2A0A0A6YYH1 394 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC16A8O95907 504 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 C8BP07358 591 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 VARSP26640 1264 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 PBLDP30039 288 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 CTHP32929 405 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 HNF4AP41235 474 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 BDKRB1P46663 353 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 HMGCS1Q01581 520 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 CHIT1Q13231 466 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 NFYCQ13952 458 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 ARPINQ7Z6K5 226 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 HEATR4Q86WZ0 1026 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 RNF148Q8N7C7 305 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 DNAJC9Q8WXX5 260 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 VPS33AQ96AX1 596 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 CMTM7Q96FZ5 175 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 METTL2AQ96IZ6 378 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 C1QTNF2Q9BXJ5 285 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 INTS7Q9NVH2 962 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 FAM8A1Q9UBU6 413 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 TMED5Q9Y3A6 229 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 PCDHA9Q9Y5H5 950 aa13.91□□□□□ -0.18
RTFDC1-201ENST00000023939 C9JVG2 144 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 H0YIV9 168 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 NME4O00746 187 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 SEC22BO75396 215 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 BAG2O95816 211 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 PRPS2P11908 318 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ACADSP16219 412 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 TIE1P35590 1138 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 TRIM23P36406 574 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ERFP50548 548 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 PNLIPRP1P54315 467 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 IRF8Q02556 426 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 BNIP2Q12982 314 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 CSTF3Q12996 717 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 NAE1Q13564 534 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 CCSMST1Q4G0I0 132 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 USP39Q53GS9 565 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 SGO1Q5FBB7 561 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 PAGE3Q5JUK9 113 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 C6orf10Q5SRN2 563 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 IRAK1BP1Q5VVH5 260 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 SDE2Q6IQ49 451 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 GRHL2Q6ISB3 625 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 HIPK4Q8NE63 616 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ZUFSPQ96AP4 578 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 WDR34Q96EX3 536 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 FCRL1Q96LA6 429 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 OR4K3Q96R72 315 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ZBTB18Q99592 522 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC39A3Q9BRY0 314 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 OR52A5Q9H2C5 316 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 MUC13Q9H3R2 512 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ITM2CQ9NQX7 267 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 SERGEFQ9UGK8 458 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 A0A1W2PP55 124 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 PCDH8O95206 1070 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 HSD3B1P14060 373 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 POU3F3P20264 500 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 ATP6V1C1P21283 382 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 HSD3B2P26439 372 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 HALP42357 657 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 EEFSECP57772 596 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 STARD3Q14849 445 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 TAF11Q15544 211 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 MUM1Q2TAK8 710 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 TIGD2Q4W5G0 525 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 TMEM196Q5HYL7 178 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 C10orf62Q5T681 223 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 KIAA1161Q6NSJ0 714 aa13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 RALGPS2Q86X27 583 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-201ENST00000023939 PQLC1Q8N2U9 271 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms