RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 MAP3K5Q99683 1374 aa14.51□□□□□ -0.09
SCARB2-222ENST00000640634 DCTN1Q14203 1278 aa14.51□□□□□ -0.09
SCARB2-222ENST00000640634 AKAP4Q5JQC9 854 aa14.51□□□□□ -0.09
SCARB2-222ENST00000640634 MAPK8IP3Q9UPT6 1336 aa14.5□□□□□ -0.09
SCARB2-222ENST00000640634 MCM10Q7L590 875 aa14.49□□□□□ -0.09
SCARB2-222ENST00000640634 GAS2L2Q8NHY3 880 aa14.49□□□□□ -0.09
SCARB2-222ENST00000640634 THUMPD2Q9BTF0 503 aaKnown RBP14.49□□□□□ -0.09
SCARB2-222ENST00000640634 BCL11BQ9C0K0 894 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-222ENST00000640634 APBA3O96018 575 aa14.49□□□□□ -0.09
SCARB2-222ENST00000640634 EN1Q05925 392 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-222ENST00000640634 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
SCARB2-222ENST00000640634 IL17REQ8NFR9 667 aa14.49□□□□□ -0.09
SCARB2-222ENST00000640634 DCAF5Q96JK2 942 aa14.49□□□□□ -0.09
SCARB2-222ENST00000640634 GNAT3A8MTJ3 354 aa14.48□□□□□ -0.09
SCARB2-222ENST00000640634 RNMTO43148 476 aaKnown RBP14.48□□□□□ -0.09
SCARB2-222ENST00000640634 NFE2L2Q16236 605 aa14.48□□□□□ -0.09
SCARB2-222ENST00000640634 PIGBQ92521 554 aa14.48□□□□□ -0.09
SCARB2-222ENST00000640634 RUNDC1Q96C34 613 aa14.48□□□□□ -0.09
SCARB2-222ENST00000640634 MRC1P22897 1456 aa14.47□□□□□ -0.09
SCARB2-222ENST00000640634 CCER2I3L3R5 266 aa14.46□□□□□ -0.09
SCARB2-222ENST00000640634 APAF1O14727 1248 aa14.46□□□□□ -0.09
SCARB2-222ENST00000640634 TMPOP42166 694 aaKnown RBP14.46□□□□□ -0.09
SCARB2-222ENST00000640634 KCNQ4P56696 695 aa14.46□□□□□ -0.09
SCARB2-222ENST00000640634 NFATC2IPQ8NCF5 419 aa14.46□□□□□ -0.09
SCARB2-222ENST00000640634 EZH2Q15910 746 aaKnown RBP14.46□□□□□ -0.1
SCARB2-222ENST00000640634 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.1
SCARB2-222ENST00000640634 TMOD3Q9NYL9 352 aa14.46□□□□□ -0.1
SCARB2-222ENST00000640634 SIPA1L3O60292 1781 aaPredicted RBP14.45□□□□□ -0.1
SCARB2-222ENST00000640634 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
SCARB2-222ENST00000640634 RIPK4P57078 832 aa14.45□□□□□ -0.1
SCARB2-222ENST00000640634 CABP4P57796 275 aa14.45□□□□□ -0.1
SCARB2-222ENST00000640634 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
SCARB2-222ENST00000640634 CEMIPQ8WUJ3 1361 aa14.45□□□□□ -0.1
SCARB2-222ENST00000640634 NEFMP07197 916 aa14.44□□□□□ -0.1
SCARB2-222ENST00000640634 SF3B2Q13435 895 aaKnown RBP14.44□□□□□ -0.1
SCARB2-222ENST00000640634 PROM2Q8N271 834 aa14.44□□□□□ -0.1
SCARB2-222ENST00000640634 SLC52A2Q9HAB3 445 aa14.44□□□□□ -0.1
SCARB2-222ENST00000640634 ERVV-2B6SEH9 535 aa14.44□□□□□ -0.1
SCARB2-222ENST00000640634 CAMKK2Q96RR4 588 aa14.44□□□□□ -0.1
SCARB2-222ENST00000640634 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
SCARB2-222ENST00000640634 SALL2Q9Y467 1007 aaPredicted RBP14.44□□□□□ -0.1
SCARB2-222ENST00000640634 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
SCARB2-222ENST00000640634 RREB1Q92766 1687 aa14.43□□□□□ -0.1
SCARB2-222ENST00000640634 LY75O60449 1722 aa14.43□□□□□ -0.1
SCARB2-222ENST00000640634 SLC39A6Q13433 755 aa14.43□□□□□ -0.1
SCARB2-222ENST00000640634 PNNQ9H307 717 aaKnown RBP14.43□□□□□ -0.1
SCARB2-222ENST00000640634 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
SCARB2-222ENST00000640634 NUP188Q5SRE5 1749 aa14.42□□□□□ -0.1
SCARB2-222ENST00000640634 BAG6P46379 1132 aa14.42□□□□□ -0.1
SCARB2-222ENST00000640634 CCDC125Q86Z20 511 aa14.42□□□□□ -0.1
SCARB2-222ENST00000640634 PALLDQ8WX93 1383 aa14.42□□□□□ -0.1
SCARB2-222ENST00000640634 RGPD3A6NKT7 1758 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-222ENST00000640634 RGPD4Q7Z3J3 1758 aa14.41□□□□□ -0.1
SCARB2-222ENST00000640634 RTF1Q92541 710 aaKnown RBP14.41□□□□□ -0.1
SCARB2-222ENST00000640634 LRRC4BQ9NT99 713 aa14.41□□□□□ -0.1
SCARB2-222ENST00000640634 MIS18AQ9NYP9 233 aa14.41□□□□□ -0.1
SCARB2-222ENST00000640634 KCNQ3O43525 872 aa14.41□□□□□ -0.1
SCARB2-222ENST00000640634 KCPQ6ZWJ8 1503 aa14.4□□□□□ -0.1
SCARB2-222ENST00000640634 TEFQ10587 303 aa14.4□□□□□ -0.1
SCARB2-222ENST00000640634 TXNRD1Q16881 649 aa14.4□□□□□ -0.1
SCARB2-222ENST00000640634 SLC4A9Q96Q91 983 aa14.4□□□□□ -0.1
SCARB2-222ENST00000640634 PLSCR1O15162 318 aa14.39□□□□□ -0.11
SCARB2-222ENST00000640634 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
SCARB2-222ENST00000640634 PTCD1O75127 700 aaKnown RBP14.39□□□□□ -0.11
SCARB2-222ENST00000640634 UBR2Q8IWV8 1755 aa14.38□□□□□ -0.11
SCARB2-222ENST00000640634 HTATSF1O43719 755 aaKnown RBP14.38□□□□□ -0.11
SCARB2-222ENST00000640634 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-222ENST00000640634 ITPK1Q13572 414 aa14.37□□□□□ -0.11
SCARB2-222ENST00000640634 RBM42Q9BTD8 480 aaKnown RBP14.37□□□□□ -0.11
SCARB2-222ENST00000640634 TJP1Q07157 1748 aa14.37□□□□□ -0.11
SCARB2-222ENST00000640634 KDM3BQ7LBC6 1761 aa14.37□□□□□ -0.11
SCARB2-222ENST00000640634 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
SCARB2-222ENST00000640634 VASPP50552 380 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-222ENST00000640634 CCNL1Q9UK58 526 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-222ENST00000640634 C5P01031 1676 aa14.36□□□□□ -0.11
SCARB2-222ENST00000640634 SRCAPQ6ZRS2 3230 aa14.36□□□□□ -0.11
SCARB2-222ENST00000640634 LOC102724428A0A0B4J2F2 783 aa14.35□□□□□ -0.11
SCARB2-222ENST00000640634 SIK1P57059 783 aa14.35□□□□□ -0.11
SCARB2-222ENST00000640634 PRAMEF22A3QJZ6 481 aa14.35□□□□□ -0.11
SCARB2-222ENST00000640634 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
SCARB2-222ENST00000640634 SMIM5Q71RC9 77 aa14.35□□□□□ -0.11
SCARB2-222ENST00000640634 ZNF496Q96IT1 587 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-222ENST00000640634 TAF1LQ8IZX4 1826 aa14.35□□□□□ -0.11
SCARB2-222ENST00000640634 LMOD3Q0VAK6 560 aa14.34□□□□□ -0.11
SCARB2-222ENST00000640634 TAF7Q15545 349 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-222ENST00000640634 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
SCARB2-222ENST00000640634 WWC1Q8IX03 1113 aa14.34□□□□□ -0.11
SCARB2-222ENST00000640634 LINC00116Q8NCU8 138 aa14.34□□□□□ -0.11
SCARB2-222ENST00000640634 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-222ENST00000640634 LAS1LQ9Y4W2 734 aaKnown RBP14.34□□□□□ -0.11
SCARB2-222ENST00000640634 ATP6V1AP38606 617 aa14.33□□□□□ -0.12
SCARB2-222ENST00000640634 AMIGO3Q86WK7 504 aa14.33□□□□□ -0.12
SCARB2-222ENST00000640634 COL5A3P25940 1745 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-222ENST00000640634 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-222ENST00000640634 KRT24Q2M2I5 525 aa14.32□□□□□ -0.12
SCARB2-222ENST00000640634 IFNLR1Q8IU57 520 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-222ENST00000640634 TUBGCP6Q96RT7 1819 aa14.32□□□□□ -0.12
SCARB2-222ENST00000640634 C4BP0C0L5 1744 aa14.32□□□□□ -0.12
SCARB2-222ENST00000640634 PSDA5PKW4 1024 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-222ENST00000640634 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms