RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	DBF4	Q9UBU7	674 aa	Predicted RBP	10.16	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	NFKBIB	Q15653	356 aa		10.16	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.16	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	THUMPD2	Q9BTF0	503 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	WDR33	Q9C0J8	1336 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	MRE11	P49959	708 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	C19orf44	Q9H6X5	657 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	PTPRT	O14522	1441 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	EPS15	P42566	896 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	CCAR1	Q8IX12	1150 aa	Known RBP	10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	SSH1	Q8WYL5	1049 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	IL1RAPL2	Q9NP60	686 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	HECW2	Q9P2P5	1572 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	HYPK	Q9NX55	129 aa		10.15	□□□□□ -0.78
ARHGEF9-238	ENST00000639092	CCDC69	A6NI79	296 aa		10.15	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	IFIT1	P09914	478 aa	Known RBP	10.15	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TDO2	P48775	406 aa		10.15	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	RARS	P54136	660 aa	Known RBP	10.15	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	FMNL2	Q96PY5	1086 aa		10.15	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	BACH2	Q9BYV9	841 aa		10.15	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	LRP2BP	Q9P2M1	347 aa		10.15	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TTC37	Q6PGP7	1564 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	METTL24	Q5JXM2	366 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	UBAC1	Q9BSL1	405 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	RAI14	Q9P0K7	980 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ARHGAP31	Q2M1Z3	1444 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092		K7ELQ4	463 aa	Predicted RBP	10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	EXOC5	O00471	708 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ZPR1	O75312	459 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	KRT85	P78386	507 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	SOGA3	Q5TF21	947 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ZNF592	Q92610	1267 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TMOD2	Q9NZR1	351 aa		10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	EDC4	Q6P2E9	1401 aa	Known RBP	10.14	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	FIBP	O43427	364 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ATP2B2	Q01814	1243 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	FILIP1L	Q4L180	1135 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	IFNL2	Q8IZJ0	200 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	DNAAF4	Q8WXU2	420 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TMEM2	Q9UHN6	1383 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ARID3A	Q99856	593 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ZNF287	Q9HBT7	754 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	EXOC6B	Q9Y2D4	811 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	FLT4	P35916	1363 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	BABAM1	Q9NWV8	329 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	NOL7	Q9UMY1	257 aa	Known RBP	10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	SHROOM2	Q13796	1616 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TRAK2	O60296	914 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	IDH1	O75874	414 aa	Known RBP	10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	DCTN1	Q14203	1278 aa		10.13	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	DHX8	Q14562	1220 aa	Known RBP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	NGLY1	Q96IV0	654 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MIS18A	Q9NYP9	233 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	NASP	P49321	788 aa	Predicted RBP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	AIDA	Q96BJ3	306 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MX1	P20591	662 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	IMMT	Q16891	758 aa	Known RBP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	LARP1B	Q659C4	914 aa	Known RBP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	PER1	O15534	1290 aa	Predicted RBP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ADAMTS2	O95450	1211 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	KCNA6	P17658	529 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	RBM5	P52756	815 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	IFIT5	Q13325	482 aa	Known RBP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CAVIN4	Q5BKX8	364 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	BICDL1	Q6ZP65	573 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	USHBP1	Q8N6Y0	703 aa		10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092		U3KPZ7	1027 aa	Predicted RBP	10.12	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CLASP1	Q7Z460	1538 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CWC27	Q6UX04	472 aa	Known RBP	10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MPRIP	Q6WCQ1	1025 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	WASF1	Q92558	559 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	JAKMIP1	Q96N16	626 aa	Known RBP	10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	KRT18	P05783	430 aa	Known RBP	10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ODF2	Q5BJF6	829 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CAVIN1	Q6NZI2	390 aa	Known RBP	10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MYD88	Q99836	296 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	NLRP1	Q9C000	1473 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CNKSR2	Q8WXI2	1034 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TRIM5	Q9C035	493 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	PDRG1	Q9NUG6	133 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ABCF2	Q9UG63	623 aa		10.11	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	STIM1	Q13586	685 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	NUP133	Q8WUM0	1156 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	PRPF40A	O75400	957 aa	Known RBP	10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	NAP1L1	P55209	391 aa	Known RBP	10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CCDC173	Q0VFZ6	552 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	FLII	Q13045	1269 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	RSPH6A	Q9H0K4	717 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	CCDC39	Q9UFE4	941 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	DACH1	Q9UI36	760 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	TET3	O43151	1660 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	SPATA31E1	Q6ZUB1	1445 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	MNS1	Q8NEH6	495 aa		10.1	□□□□□ -0.79
ARHGEF9-238	ENST00000639092	SMARCE1	Q969G3	411 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms