RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 IL1RAPL2Q9NP60 686 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 GNAI2P04899 355 aa11.44□□□□□ -0.58
NECAP1-215ENST00000639071 MX1P20591 662 aa11.44□□□□□ -0.58
NECAP1-215ENST00000639071 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
NECAP1-215ENST00000639071 RIMS1Q86UR5 1692 aaKnown RBP11.44□□□□□ -0.58
NECAP1-215ENST00000639071 CYB5RLQ6IPT4 315 aa11.44□□□□□ -0.58
NECAP1-215ENST00000639071 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
NECAP1-215ENST00000639071 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
NECAP1-215ENST00000639071 IL25Q9H293 177 aa11.44□□□□□ -0.58
NECAP1-215ENST00000639071 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
NECAP1-215ENST00000639071 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
NECAP1-215ENST00000639071 KIAA0232Q92628 1395 aa11.43□□□□□ -0.58
NECAP1-215ENST00000639071 CRB1P82279 1406 aa11.43□□□□□ -0.58
NECAP1-215ENST00000639071 GADD45BO75293 160 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-215ENST00000639071 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-215ENST00000639071 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
NECAP1-215ENST00000639071 FAM13BQ9NYF5 915 aa11.43□□□□□ -0.58
NECAP1-215ENST00000639071 NOL7Q9UMY1 257 aaKnown RBP11.43□□□□□ -0.58
NECAP1-215ENST00000639071 CCT4P50991 539 aaKnown RBP11.42□□□□□ -0.58
NECAP1-215ENST00000639071 PDLIM2Q96JY6 352 aa11.42□□□□□ -0.58
NECAP1-215ENST00000639071 STK31Q9BXU1 1019 aa11.42□□□□□ -0.58
NECAP1-215ENST00000639071 ZMYND15Q9H091 742 aa11.42□□□□□ -0.58
NECAP1-215ENST00000639071 LRRFIP2Q9Y608 721 aaKnown RBP11.42□□□□□ -0.58
NECAP1-215ENST00000639071 MON2Q7Z3U7 1717 aa11.42□□□□□ -0.58
NECAP1-215ENST00000639071 CHMLP26374 656 aa11.42□□□□□ -0.58
NECAP1-215ENST00000639071 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 BRD1O95696 1058 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 MCCP23508 829 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 FLIIQ13045 1269 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 OSBPL3Q9H4L5 887 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 C3P01024 1663 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 NRXN3Q9Y4C0 1643 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 PTMAP06454 111 aaKnown RBP11.41□□□□□ -0.58
NECAP1-215ENST00000639071 ITSN1Q15811 1721 aa11.41□□□□□ -0.58
NECAP1-215ENST00000639071 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
NECAP1-215ENST00000639071 TSPOAP1O95153 1857 aa11.4□□□□□ -0.58
NECAP1-215ENST00000639071 PEAK1Q9H792 1746 aa11.4□□□□□ -0.58
NECAP1-215ENST00000639071 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
NECAP1-215ENST00000639071 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.58
NECAP1-215ENST00000639071 UQCRHLA0A096LP55 91 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 UQCRHP07919 91 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 AMPHP49418 695 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
NECAP1-215ENST00000639071 SALL3Q9BXA9 1300 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 MBD3O95983 291 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 USP48Q86UV5 1035 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 ZNF830Q96NB3 372 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-215ENST00000639071 EYA1Q99502 592 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 TSPY26PQ9H489 355 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 NRKQ7Z2Y5 1582 aa11.39□□□□□ -0.59
NECAP1-215ENST00000639071 AKAP12Q02952 1782 aa11.38□□□□□ -0.59
NECAP1-215ENST00000639071 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
NECAP1-215ENST00000639071 SLC26A8Q96RN1 970 aa11.38□□□□□ -0.59
NECAP1-215ENST00000639071 CPA1P15085 419 aa11.38□□□□□ -0.59
NECAP1-215ENST00000639071 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
NECAP1-215ENST00000639071 CUL4AQ13619 759 aa11.38□□□□□ -0.59
NECAP1-215ENST00000639071 ZNF500O60304 480 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-215ENST00000639071 GNAI3P08754 354 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 HS1BP3Q53T59 392 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 PHAXQ9H814 394 aaKnown RBP11.37□□□□□ -0.59
NECAP1-215ENST00000639071 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 SURF6O75683 361 aaKnown RBP11.37□□□□□ -0.59
NECAP1-215ENST00000639071 MCM2P49736 904 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 PKNOX2Q96KN3 472 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 CNPY2Q9Y2B0 182 aa11.37□□□□□ -0.59
NECAP1-215ENST00000639071 UBTFL1P0CB47 393 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-215ENST00000639071 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 JARID2Q92833 1246 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-215ENST00000639071 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 EIF2S2P20042 333 aaKnown RBP11.36□□□□□ -0.59
NECAP1-215ENST00000639071 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 C17orf53Q8N3J3 647 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-215ENST00000639071 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
NECAP1-215ENST00000639071 SRCIN1Q9C0H9 1055 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 USP25Q9UHP3 1055 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
NECAP1-215ENST00000639071 TCHHQ07283 1943 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
NECAP1-215ENST00000639071 CEP170BQ9Y4F5 1589 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-215ENST00000639071 USP6P35125 1406 aa11.35□□□□□ -0.59
NECAP1-215ENST00000639071 DNTTIP2Q5QJE6 756 aaKnown RBP11.35□□□□□ -0.59
NECAP1-215ENST00000639071 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
NECAP1-215ENST00000639071 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
NECAP1-215ENST00000639071 CWC27Q6UX04 472 aaKnown RBP11.35□□□□□ -0.59
NECAP1-215ENST00000639071 PPP1R42Q7Z4L9 355 aa11.35□□□□□ -0.59
NECAP1-215ENST00000639071 FIBPO43427 364 aa11.34□□□□□ -0.59
NECAP1-215ENST00000639071 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
NECAP1-215ENST00000639071 SYAP1Q96A49 352 aaPredicted RBP11.34□□□□□ -0.59
NECAP1-215ENST00000639071 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
NECAP1-215ENST00000639071 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
NECAP1-215ENST00000639071 ANXA1P04083 346 aa11.34□□□□□ -0.59
NECAP1-215ENST00000639071 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
NECAP1-215ENST00000639071 ANAPC15P60006 121 aa11.34□□□□□ -0.59
NECAP1-215ENST00000639071 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms