RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708		A0A1W2PP64	1363 aa		13.32	□□□□□ -0.28
STRADA-231	ENST00000638708	GNAI1	P63096	354 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	TAF7L	Q5H9L4	462 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	ZNF397	Q8NF99	534 aa	Predicted RBP	13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	OSBPL3	Q9H4L5	887 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	C14orf93	Q9H972	538 aa	Known RBP	13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	IFT57	Q9NWB7	429 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	TULP2	O00295	520 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	FCHSD2	O94868	740 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	TSPYL6	Q8N831	410 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	TSPYL1	Q9H0U9	437 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	FAM53C	Q9NYF3	392 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	CAMSAP1	Q5T5Y3	1602 aa		13.31	□□□□□ -0.28
STRADA-231	ENST00000638708	DLG5	Q8TDM6	1919 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	PLCB2	Q00722	1185 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	SPC24	Q8NBT2	197 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	CCDC112	Q8NEF3	446 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	CNPY2	Q9Y2B0	182 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	PTGS1	P23219	599 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	CEP85	Q6P2H3	762 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	ESYT1	Q9BSJ8	1104 aa		13.3	□□□□□ -0.28
STRADA-231	ENST00000638708	CLTC	Q00610	1675 aa	Known RBP	13.29	□□□□□ -0.28
STRADA-231	ENST00000638708	LMTK2	Q8IWU2	1503 aa		13.29	□□□□□ -0.28
STRADA-231	ENST00000638708	ZNF853	P0CG23	659 aa		13.29	□□□□□ -0.28
STRADA-231	ENST00000638708	NFE2L2	Q16236	605 aa		13.29	□□□□□ -0.28
STRADA-231	ENST00000638708	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.29	□□□□□ -0.28
STRADA-231	ENST00000638708	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.29	□□□□□ -0.28
STRADA-231	ENST00000638708	POGZ	Q7Z3K3	1410 aa		13.29	□□□□□ -0.28
STRADA-231	ENST00000638708	ZSCAN22	P10073	491 aa	Predicted RBP	13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	TNNT1	P13805	278 aa		13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	TWISTNB	Q3B726	338 aa	Predicted RBP	13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	PALD1	Q9ULE6	856 aa		13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	RIMBP3C	A6NJZ7	1639 aa		13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	RIMBP3B	A6NNM3	1639 aa		13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	RIMBP3	Q9UFD9	1639 aa		13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	CCDC192	P0DO97	292 aa		13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	C16orf45	Q96MC5	204 aa	Predicted RBP	13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	NEO1	Q92859	1461 aa		13.28	□□□□□ -0.28
STRADA-231	ENST00000638708	SLFNL1	Q499Z3	407 aa		13.27	□□□□□ -0.28
STRADA-231	ENST00000638708	GIMAP6	Q6P9H5	292 aa		13.27	□□□□□ -0.28
STRADA-231	ENST00000638708	NOL8	Q76FK4	1167 aa	Known RBP	13.27	□□□□□ -0.28
STRADA-231	ENST00000638708	FAM200A	Q8TCP9	573 aa		13.27	□□□□□ -0.28
STRADA-231	ENST00000638708	MBIP	Q9NS73	344 aa		13.27	□□□□□ -0.28
STRADA-231	ENST00000638708	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.27	□□□□□ -0.28
STRADA-231	ENST00000638708	ATP6V1D	Q9Y5K8	247 aa		13.27	□□□□□ -0.28
STRADA-231	ENST00000638708	PRKAR2B	P31323	418 aa		13.27	□□□□□ -0.29
STRADA-231	ENST00000638708	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.27	□□□□□ -0.29
STRADA-231	ENST00000638708	GGNBP2	Q9H3C7	697 aa		13.27	□□□□□ -0.29
STRADA-231	ENST00000638708	CPSF1	Q10570	1443 aa	Known RBP	13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	KIDINS220	Q9ULH0	1771 aa		13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	MLH3	Q9UHC1	1453 aa		13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	EPB41L2	O43491	1005 aa	Known RBP	13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	RAPGEF3	O95398	923 aa		13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	PDE1A	P54750	535 aa		13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	MSH6	P52701	1360 aa		13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	CD163L1	Q9NR16	1453 aa		13.26	□□□□□ -0.29
STRADA-231	ENST00000638708	F13A1	P00488	732 aa		13.25	□□□□□ -0.29
STRADA-231	ENST00000638708	CAPN2	P17655	700 aa		13.25	□□□□□ -0.29
STRADA-231	ENST00000638708	KMT5B	Q4FZB7	885 aa		13.25	□□□□□ -0.29
STRADA-231	ENST00000638708	FIBP	O43427	364 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	NAA30	Q147X3	362 aa	Predicted RBP	13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	CCDC186	Q7Z3E2	898 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	KIAA0232	Q92628	1395 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	CCDC171	Q6TFL3	1326 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	ABCC3	O15438	1527 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	STX6	O43752	255 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	HMMR	O75330	724 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	ZSCAN25	Q6NSZ9	544 aa		13.24	□□□□□ -0.29
STRADA-231	ENST00000638708	SALL3	Q9BXA9	1300 aa		13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	RIMS2	Q9UQ26	1411 aa		13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	FAM69C	Q0P6D2	419 aa		13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	RNF20	Q5VTR2	975 aa		13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	CEP135	Q66GS9	1140 aa		13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	THUMPD2	Q9BTF0	503 aa	Known RBP	13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	ANO2	Q9NQ90	1003 aa		13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	PREX1	Q8TCU6	1659 aa		13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.23	□□□□□ -0.29
STRADA-231	ENST00000638708	ELL2	O00472	640 aa	Predicted RBP	13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	FYB1	O15117	783 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	LRMP	Q12912	555 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	PLA2G4D	Q86XP0	818 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	PLCD3	Q8N3E9	789 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	C8orf58	Q8NAV2	365 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	KIF1BP	Q96EK5	621 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	ERO1A	Q96HE7	468 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	CABP2	Q9NPB3	220 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	ERICH4	A6NGS2	130 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	APBB1	O00213	710 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	CHML	P26374	656 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	CYP2C19	P33261	490 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	ZNF75D	P51815	510 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	LMOD3	Q0VAK6	560 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	TPD52L1	Q16890	204 aa	Predicted RBP	13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	TMEM132E	Q6IEE7	984 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	UPF3B	Q9BZI7	483 aa	Known RBP	13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	MRVI1	Q9Y6F6	885 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	RPGRIP1L	Q68CZ1	1315 aa		13.22	□□□□□ -0.29
STRADA-231	ENST00000638708	SYT1	P21579	422 aa		13.21	□□□□□ -0.29
STRADA-231	ENST00000638708	FBXO38	Q6PIJ6	1188 aa		13.21	□□□□□ -0.29
STRADA-231	ENST00000638708	CDC25B	P30305	580 aa		13.21	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms