RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TAF4BQ92750 862 aa19.85■□□□□ 0.77
CACNA1A-253ENST00000637927 FAM212AQ96EL1 285 aa19.85■□□□□ 0.77
CACNA1A-253ENST00000637927 SH3BP5O60239 455 aa19.85■□□□□ 0.77
CACNA1A-253ENST00000637927 JAKMIP1Q96N16 626 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-253ENST00000637927 ZNF622Q969S3 477 aaKnown RBP eCLIP19.85■□□□□ 0.77
CACNA1A-253ENST00000637927 SIRT1Q96EB6 747 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 TMOD2Q9NZR1 351 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 FAM170AA1A519 330 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 SRGAP3O43295 1099 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 MKNK2Q9HBH9 465 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 HIP1O00291 1037 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 BBXQ8WY36 941 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 EPB41L2O43491 1005 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
CACNA1A-253ENST00000637927 ZWINTO95229 277 aa19.83■□□□□ 0.77
CACNA1A-253ENST00000637927 GPATCH11Q8N954 259 aa19.83■□□□□ 0.77
CACNA1A-253ENST00000637927 BMP2KQ9NSY1 1161 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-253ENST00000637927 F8W031 263 aaPredicted RBP19.83■□□□□ 0.76
CACNA1A-253ENST00000637927 SEC63Q9UGP8 760 aaKnown RBP19.83■□□□□ 0.76
CACNA1A-253ENST00000637927 IPO4Q8TEX9 1081 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-253ENST00000637927 THUMPD2Q9BTF0 503 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-253ENST00000637927 AKNAQ7Z591 1439 aa19.82■□□□□ 0.76
CACNA1A-253ENST00000637927 IFFO1Q0D2I5 559 aa19.82■□□□□ 0.76
CACNA1A-253ENST00000637927 POTEJP0CG39 1038 aa19.82■□□□□ 0.76
CACNA1A-253ENST00000637927 PLS1Q14651 629 aa19.82■□□□□ 0.76
CACNA1A-253ENST00000637927 LARP1BQ659C4 914 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-253ENST00000637927 RBM26Q5T8P6 1007 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-253ENST00000637927 BRPF3Q9ULD4 1205 aa19.81■□□□□ 0.76
CACNA1A-253ENST00000637927 PDRG1Q9NUG6 133 aa19.81■□□□□ 0.76
CACNA1A-253ENST00000637927 RAPGEF3O95398 923 aa19.81■□□□□ 0.76
CACNA1A-253ENST00000637927 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 MCM10Q7L590 875 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 C16orf71Q8IYS4 520 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 SRCIN1Q9C0H9 1055 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 BIN2Q9UBW5 565 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 SSX2IPQ9Y2D8 614 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 ZPR1O75312 459 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 TNIP1Q15025 636 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 METTL24Q5JXM2 366 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 RANBP6O60518 1105 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 BICD1Q96G01 975 aa19.8■□□□□ 0.76
CACNA1A-253ENST00000637927 POLR3GO15318 223 aaPredicted RBP19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 NOL7Q9UMY1 257 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 ANKRD50Q9ULJ7 1429 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 PPARDQ03181 441 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 IGHMBP2P38935 993 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 TMEM110-MUSTN1A8MSY1 372 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 MYD88Q99836 296 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 FAM107BQ9H098 131 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 CACNA2D4Q7Z3S7 1137 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 PSMC4P43686 418 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 CCDC150Q8NCX0 1101 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 FEZ1Q99689 392 aa19.79■□□□□ 0.76
CACNA1A-253ENST00000637927 EIF3JO75822 258 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-253ENST00000637927 LETM1O95202 739 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-253ENST00000637927 UQCRHP07919 91 aa19.78■□□□□ 0.76
CACNA1A-253ENST00000637927 CASTP20810 708 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-253ENST00000637927 CKAP2LQ8IYA6 745 aa19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 PANK2Q9BZ23 570 aa19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 TIGD1Q96MW7 591 aa19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 WDHD1O75717 1129 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 LUC7LQ9NQ29 371 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 JARID2Q92833 1246 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-253ENST00000637927 RRBP1Q9P2E9 1410 aaKnown RBP19.77■□□□□ 0.75
CACNA1A-253ENST00000637927 TCERG1LQ5VWI1 586 aa19.77■□□□□ 0.75
CACNA1A-253ENST00000637927 FGD6Q6ZV73 1430 aa19.77■□□□□ 0.75
CACNA1A-253ENST00000637927 RABEP1Q15276 862 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 AIDAQ96BJ3 306 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 FYCO1Q9BQS8 1478 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 PRC1O43663 620 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 PPP1R12AO14974 1030 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 CCT4P50991 539 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 TMCO3Q6UWJ1 677 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 CCDC160A6NGH7 325 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 RFX1P22670 979 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 CFAP100Q494V2 611 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 WAPLQ7Z5K2 1190 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 TDRD12Q587J7 1177 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 SPATA32Q96LK8 384 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 EXOC6BQ9Y2D4 811 aa19.76■□□□□ 0.75
CACNA1A-253ENST00000637927 HOOK3Q86VS8 718 aa19.75■□□□□ 0.75
CACNA1A-253ENST00000637927 SKAP1Q86WV1 359 aa19.75■□□□□ 0.75
CACNA1A-253ENST00000637927 UQCRHLA0A096LP55 91 aa19.75■□□□□ 0.75
CACNA1A-253ENST00000637927 FERMT3Q86UX7 667 aa19.74■□□□□ 0.75
CACNA1A-253ENST00000637927 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
CACNA1A-253ENST00000637927 BOLA2Q9H3K6 86 aa19.74■□□□□ 0.75
CACNA1A-253ENST00000637927 TRMT1Q9NXH9 659 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-253ENST00000637927 C6orf229H3BNL8 230 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 FLIIQ13045 1269 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 BLOC1S2Q6QNY1 142 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 SYCP3Q8IZU3 236 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 MRE11P49959 708 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 CHD1LQ86WJ1 897 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 THEMISQ8N1K5 641 aaPredicted RBP19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 CUX1P39880 1505 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 GPTP24298 496 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 CFAP58Q5T655 872 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms