RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 GPT2Q8TD30 523 aa17.16■□□□□ 0.34
CACNA1A-228ENST00000636610 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-228ENST00000636610 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
CACNA1A-228ENST00000636610 RBSNQ9H1K0 784 aa17.15■□□□□ 0.34
CACNA1A-228ENST00000636610 TNRQ92752 1358 aa17.15■□□□□ 0.34
CACNA1A-228ENST00000636610 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
CACNA1A-228ENST00000636610 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
CACNA1A-228ENST00000636610 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
CACNA1A-228ENST00000636610 CRB1P82279 1406 aa17.14■□□□□ 0.34
CACNA1A-228ENST00000636610 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-228ENST00000636610 ABTB2Q8N961 1025 aa17.14■□□□□ 0.33
CACNA1A-228ENST00000636610 IL17REQ8NFR9 667 aa17.14■□□□□ 0.33
CACNA1A-228ENST00000636610 RIMS1Q86UR5 1692 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-228ENST00000636610 TMEM2Q9UHN6 1383 aa17.13■□□□□ 0.33
CACNA1A-228ENST00000636610 SURF6O75683 361 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-228ENST00000636610 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
CACNA1A-228ENST00000636610 USP6P35125 1406 aa17.13■□□□□ 0.33
CACNA1A-228ENST00000636610 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
CACNA1A-228ENST00000636610 TMEM63CQ9P1W3 806 aa17.12■□□□□ 0.33
CACNA1A-228ENST00000636610 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
CACNA1A-228ENST00000636610 GNAT3A8MTJ3 354 aa17.12■□□□□ 0.33
CACNA1A-228ENST00000636610 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-228ENST00000636610 CPA1P15085 419 aa17.12■□□□□ 0.33
CACNA1A-228ENST00000636610 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
CACNA1A-228ENST00000636610 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
CACNA1A-228ENST00000636610 KCNQ3O43525 872 aa17.11■□□□□ 0.33
CACNA1A-228ENST00000636610 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
CACNA1A-228ENST00000636610 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
CACNA1A-228ENST00000636610 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 CHMLP26374 656 aa17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 LGR6Q9HBX8 967 aa17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 NBPF7P0C2Y1 421 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
CACNA1A-228ENST00000636610 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
CACNA1A-228ENST00000636610 OVOS2A0A0J9YW53 1432 aa17.09■□□□□ 0.33
CACNA1A-228ENST00000636610 OVOS2Q6IE36 1432 aa17.09■□□□□ 0.33
CACNA1A-228ENST00000636610 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
CACNA1A-228ENST00000636610 ARID3AQ99856 593 aa17.09■□□□□ 0.33
CACNA1A-228ENST00000636610 GNAI3P08754 354 aa17.08■□□□□ 0.33
CACNA1A-228ENST00000636610 ATP8B2P98198 1209 aa17.08■□□□□ 0.33
CACNA1A-228ENST00000636610 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-228ENST00000636610 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.32
CACNA1A-228ENST00000636610 SPATA31D1Q6ZQQ2 1576 aa17.08■□□□□ 0.32
CACNA1A-228ENST00000636610 CEP170BQ9Y4F5 1589 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-228ENST00000636610 FLT4P35916 1363 aa17.08■□□□□ 0.32
CACNA1A-228ENST00000636610 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 GADD45BO75293 160 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 PTMSP20962 102 aa17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 HOXC9P31274 260 aa17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 CCDC173Q0VFZ6 552 aa17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 ISY1Q9ULR0 285 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-228ENST00000636610 PTPRUQ92729 1446 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 MCCP23508 829 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 KCNA6P17658 529 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
CACNA1A-228ENST00000636610 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
CACNA1A-228ENST00000636610 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
CACNA1A-228ENST00000636610 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-228ENST00000636610 PLCB2Q00722 1185 aa17.04■□□□□ 0.32
CACNA1A-228ENST00000636610 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
CACNA1A-228ENST00000636610 OSBPL3Q9H4L5 887 aa17.04■□□□□ 0.32
CACNA1A-228ENST00000636610 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-228ENST00000636610 C3P01024 1663 aa17.04■□□□□ 0.32
CACNA1A-228ENST00000636610 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-228ENST00000636610 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
CACNA1A-228ENST00000636610 SIRT1Q96EB6 747 aa17.03■□□□□ 0.32
CACNA1A-228ENST00000636610 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
CACNA1A-228ENST00000636610 RBM10P98175 930 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-228ENST00000636610 ZSCAN30Q86W11 494 aa17.03■□□□□ 0.32
CACNA1A-228ENST00000636610 SRCIN1Q9C0H9 1055 aa17.03■□□□□ 0.32
CACNA1A-228ENST00000636610 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-228ENST00000636610 RASEFQ8IZ41 740 aa17.02■□□□□ 0.32
CACNA1A-228ENST00000636610 ZNF445P59923 1031 aa17.02■□□□□ 0.32
CACNA1A-228ENST00000636610 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-228ENST00000636610 RHPN1Q8TCX5 695 aa17.02■□□□□ 0.32
CACNA1A-228ENST00000636610 ARHGEF10O15013 1369 aa17.02■□□□□ 0.31
CACNA1A-228ENST00000636610 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-228ENST00000636610 ITSN1Q15811 1721 aa17.02■□□□□ 0.31
CACNA1A-228ENST00000636610 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.31
CACNA1A-228ENST00000636610 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.31
CACNA1A-228ENST00000636610 NBPF4Q96M43 638 aa17.02■□□□□ 0.31
CACNA1A-228ENST00000636610 R3HCC1Q9Y3T6 440 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-228ENST00000636610 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
CACNA1A-228ENST00000636610 SALL3Q9BXA9 1300 aa17.01■□□□□ 0.31
CACNA1A-228ENST00000636610 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms