RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
CTSD-207ENST00000636571 TEFQ10587 303 aa20.36■□□□□ 0.85
CTSD-207ENST00000636571 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.852e-13■■■■■ 62.5
CTSD-207ENST00000636571 ASAP1Q9ULH1 1129 aa20.36■□□□□ 0.85
CTSD-207ENST00000636571 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
CTSD-207ENST00000636571 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
CTSD-207ENST00000636571 APBA3O96018 575 aa20.34■□□□□ 0.85
CTSD-207ENST00000636571 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
CTSD-207ENST00000636571 PAPPAQ13219 1627 aa20.33■□□□□ 0.84
CTSD-207ENST00000636571 KCNQ3O43525 872 aa20.33■□□□□ 0.84
CTSD-207ENST00000636571 DEFB132Q7Z7B7 95 aa20.33■□□□□ 0.84
CTSD-207ENST00000636571 ATG3Q9NT62 314 aa20.33■□□□□ 0.84
CTSD-207ENST00000636571 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
CTSD-207ENST00000636571 KCNQ4P56696 695 aa20.31■□□□□ 0.84
CTSD-207ENST00000636571 LAS1LQ9Y4W2 734 aaKnown RBP20.31■□□□□ 0.84
CTSD-207ENST00000636571 BTBD11A6QL63 1104 aa20.3■□□□□ 0.84
CTSD-207ENST00000636571 EN1Q05925 392 aaPredicted RBP20.3■□□□□ 0.84
CTSD-207ENST00000636571 KDM3BQ7LBC6 1761 aa20.3■□□□□ 0.84
CTSD-207ENST00000636571 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
CTSD-207ENST00000636571 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
CTSD-207ENST00000636571 PALLDQ8WX93 1383 aa20.29■□□□□ 0.84
CTSD-207ENST00000636571 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
CTSD-207ENST00000636571 LY75O60449 1722 aa20.29■□□□□ 0.84
CTSD-207ENST00000636571 UBR2Q8IWV8 1755 aa20.28■□□□□ 0.84
CTSD-207ENST00000636571 PTCD1O75127 700 aaKnown RBP20.28■□□□□ 0.84
CTSD-207ENST00000636571 SF3B2Q13435 895 aaKnown RBP20.28■□□□□ 0.84
CTSD-207ENST00000636571 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.84
CTSD-207ENST00000636571 EZH2Q15910 746 aaKnown RBP20.26■□□□□ 0.83
CTSD-207ENST00000636571 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
CTSD-207ENST00000636571 PROM2Q8N271 834 aa20.26■□□□□ 0.83
CTSD-207ENST00000636571 SLC4A9Q96Q91 983 aa20.26■□□□□ 0.83
CTSD-207ENST00000636571 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
CTSD-207ENST00000636571 RBM42Q9BTD8 480 aaKnown RBP20.25■□□□□ 0.83
CTSD-207ENST00000636571 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
CTSD-207ENST00000636571 CHL1O00533 1208 aa20.24■□□□□ 0.83
CTSD-207ENST00000636571 ZNF853P0CG23 659 aa20.24■□□□□ 0.83
CTSD-207ENST00000636571 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
CTSD-207ENST00000636571 ZNF496Q96IT1 587 aaPredicted RBP20.24■□□□□ 0.83
CTSD-207ENST00000636571 CAMKK2Q96RR4 588 aa20.24■□□□□ 0.83
CTSD-207ENST00000636571 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
CTSD-207ENST00000636571 LRRC4BQ9NT99 713 aa20.24■□□□□ 0.83
CTSD-207ENST00000636571 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
CTSD-207ENST00000636571 PLSCR1O15162 318 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 BAG6P46379 1132 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 CCDC125Q86Z20 511 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 CDCA7LQ96GN5 454 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 CFAP44Q96MT7 982 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 RGPD3A6NKT7 1758 aaPredicted RBP20.23■□□□□ 0.83
CTSD-207ENST00000636571 RGPD4Q7Z3J3 1758 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 LOC102724428A0A0B4J2F2 783 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 PRAMEF22A3QJZ6 481 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 SIK1P57059 783 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 KRT24Q2M2I5 525 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 TTC5Q8N0Z6 440 aa20.23■□□□□ 0.83
CTSD-207ENST00000636571 TXNRD1Q16881 649 aa20.22■□□□□ 0.83
CTSD-207ENST00000636571 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
CTSD-207ENST00000636571 SMARCC1Q92922 1105 aaPredicted RBP20.22■□□□□ 0.83
CTSD-207ENST00000636571 IFT57Q9NWB7 429 aa20.22■□□□□ 0.83
CTSD-207ENST00000636571 C5P01031 1676 aa20.21■□□□□ 0.83
CTSD-207ENST00000636571 TJP1Q07157 1748 aa20.21■□□□□ 0.83
CTSD-207ENST00000636571 TAF1LQ8IZX4 1826 aa20.21■□□□□ 0.83
CTSD-207ENST00000636571 RREB1Q92766 1687 aa20.21■□□□□ 0.83
CTSD-207ENST00000636571 ITPK1Q13572 414 aa20.21■□□□□ 0.83
CTSD-207ENST00000636571 CCNL1Q9UK58 526 aaPredicted RBP20.21■□□□□ 0.83
CTSD-207ENST00000636571 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
CTSD-207ENST00000636571 GNAI1P63096 354 aa20.2■□□□□ 0.82
CTSD-207ENST00000636571 CALD1Q05682 793 aaKnown RBP20.2■□□□□ 0.82
CTSD-207ENST00000636571 ATP6V1AP38606 617 aa20.19■□□□□ 0.82
CTSD-207ENST00000636571 NUP188Q5SRE5 1749 aa20.19■□□□□ 0.82
CTSD-207ENST00000636571 IL16Q14005 1332 aa20.18■□□□□ 0.82
CTSD-207ENST00000636571 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
CTSD-207ENST00000636571 HEG1Q9ULI3 1381 aa20.18■□□□□ 0.82
CTSD-207ENST00000636571 SOCS7O14512 581 aa20.18■□□□□ 0.82
CTSD-207ENST00000636571 GOLGA2Q08379 1002 aa20.18■□□□□ 0.82
CTSD-207ENST00000636571 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
CTSD-207ENST00000636571 CENPBP07199 599 aaPredicted RBP20.17■□□□□ 0.82
CTSD-207ENST00000636571 FMNL2Q96PY5 1086 aa20.17■□□□□ 0.82
CTSD-207ENST00000636571 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
CTSD-207ENST00000636571 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
CTSD-207ENST00000636571 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
CTSD-207ENST00000636571 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
CTSD-207ENST00000636571 MYH14Q7Z406 1995 aaKnown RBP20.15■□□□□ 0.82
CTSD-207ENST00000636571 ELL2O00472 640 aaPredicted RBP20.15■□□□□ 0.82
CTSD-207ENST00000636571 SLFN5Q08AF3 891 aa20.15■□□□□ 0.82
CTSD-207ENST00000636571 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
CTSD-207ENST00000636571 SLC27A3Q5K4L6 730 aa20.14■□□□□ 0.81
CTSD-207ENST00000636571 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
CTSD-207ENST00000636571 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
CTSD-207ENST00000636571 GIGYF1O75420 1035 aaPredicted RBP20.13■□□□□ 0.81
CTSD-207ENST00000636571 ANO8Q9HCE9 1232 aaPredicted RBP20.13■□□□□ 0.81
CTSD-207ENST00000636571 C4BP0C0L5 1744 aa20.13■□□□□ 0.81
CTSD-207ENST00000636571 CICQ96RK0 1608 aaPredicted RBP20.13■□□□□ 0.81
CTSD-207ENST00000636571 SMIM5Q71RC9 77 aa20.13■□□□□ 0.81
CTSD-207ENST00000636571 LAMB4A4D0S4 1761 aa20.12■□□□□ 0.81
CTSD-207ENST00000636571 E9PSI1 815 aa20.12■□□□□ 0.81
CTSD-207ENST00000636571 SNRPA1P09661 255 aaKnown RBP20.12■□□□□ 0.81
CTSD-207ENST00000636571 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
CTSD-207ENST00000636571 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
CTSD-207ENST00000636571 ZNF827Q17R98 1081 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms