RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
CLN8-209ENST00000635970 DEFB132Q7Z7B7 95 aa19.92■□□□□ 0.78
CLN8-209ENST00000635970 BCL11BQ9C0K0 894 aaPredicted RBP19.92■□□□□ 0.78
CLN8-209ENST00000635970 SF3B2Q13435 895 aaKnown RBP19.92■□□□□ 0.78
CLN8-209ENST00000635970 GAS2L2Q8NHY3 880 aa19.92■□□□□ 0.78
CLN8-209ENST00000635970 MAP3K5Q99683 1374 aa19.9■□□□□ 0.78
CLN8-209ENST00000635970 APBA3O96018 575 aa19.9■□□□□ 0.78
CLN8-209ENST00000635970 CCDC125Q86Z20 511 aa19.9■□□□□ 0.78
CLN8-209ENST00000635970 RGPD3A6NKT7 1758 aaPredicted RBP19.9■□□□□ 0.78
CLN8-209ENST00000635970 RGPD4Q7Z3J3 1758 aa19.9■□□□□ 0.78
CLN8-209ENST00000635970 MAPK8IP3Q9UPT6 1336 aa19.9■□□□□ 0.78
CLN8-209ENST00000635970 DCAF5Q96JK2 942 aa19.9■□□□□ 0.78
CLN8-209ENST00000635970 HSP90AB1P08238 724 aaKnown RBP19.89■□□□□ 0.77
CLN8-209ENST00000635970 LGR6Q9HBX8 967 aa19.89■□□□□ 0.77
CLN8-209ENST00000635970 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
CLN8-209ENST00000635970 RREB1Q92766 1687 aa19.88■□□□□ 0.77
CLN8-209ENST00000635970 NEFMP07197 916 aa19.88■□□□□ 0.77
CLN8-209ENST00000635970 EN1Q05925 392 aaPredicted RBP19.88■□□□□ 0.77
CLN8-209ENST00000635970 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
CLN8-209ENST00000635970 MRC1P22897 1456 aa19.87■□□□□ 0.77
CLN8-209ENST00000635970 GNAT3A8MTJ3 354 aa19.86■□□□□ 0.77
CLN8-209ENST00000635970 LY75O60449 1722 aa19.86■□□□□ 0.77
CLN8-209ENST00000635970 BAG6P46379 1132 aa19.86■□□□□ 0.77
CLN8-209ENST00000635970 RUNDC1Q96C34 613 aa19.86■□□□□ 0.77
CLN8-209ENST00000635970 RNMTO43148 476 aaKnown RBP19.85■□□□□ 0.77
CLN8-209ENST00000635970 NPM2Q86SE8 214 aaKnown RBP19.85■□□□□ 0.77
CLN8-209ENST00000635970 PIGBQ92521 554 aa19.85■□□□□ 0.77
CLN8-209ENST00000635970 TMOD3Q9NYL9 352 aa19.85■□□□□ 0.77
CLN8-209ENST00000635970 NUP188Q5SRE5 1749 aa19.85■□□□□ 0.77
CLN8-209ENST00000635970 EZH2Q15910 746 aaKnown RBP19.84■□□□□ 0.77
CLN8-209ENST00000635970 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
CLN8-209ENST00000635970 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
CLN8-209ENST00000635970 SENP3-EIF4A1A0A087X0R7 540 aa19.84■□□□□ 0.77
CLN8-209ENST00000635970 DCTN1Q14203 1278 aa19.84■□□□□ 0.77
CLN8-209ENST00000635970 IL17REQ8NFR9 667 aa19.84■□□□□ 0.77
CLN8-209ENST00000635970 PAPPAQ13219 1627 aa19.84■□□□□ 0.77
CLN8-209ENST00000635970 ERVV-2B6SEH9 535 aa19.83■□□□□ 0.77
CLN8-209ENST00000635970 MCM10Q7L590 875 aa19.83■□□□□ 0.77
CLN8-209ENST00000635970 CABP4P57796 275 aa19.83■□□□□ 0.76
CLN8-209ENST00000635970 CAMKK2Q96RR4 588 aa19.83■□□□□ 0.76
CLN8-209ENST00000635970 TMPOP42166 694 aaKnown RBP19.82■□□□□ 0.76
CLN8-209ENST00000635970 NEUROD2Q15784 382 aa19.82■□□□□ 0.76
CLN8-209ENST00000635970 NFATC2IPQ8NCF5 419 aa19.82■□□□□ 0.76
CLN8-209ENST00000635970 CDCA7LQ96GN5 454 aa19.82■□□□□ 0.76
CLN8-209ENST00000635970 CEMIPQ8WUJ3 1361 aa19.81■□□□□ 0.76
CLN8-209ENST00000635970 CENPQQ7L2Z9 268 aaPredicted RBP19.81■□□□□ 0.76
CLN8-209ENST00000635970 PLSCR1O15162 318 aa19.81■□□□□ 0.76
CLN8-209ENST00000635970 SLC52A2Q9HAB3 445 aa19.81■□□□□ 0.76
CLN8-209ENST00000635970 RIPK4P57078 832 aa19.8■□□□□ 0.76
CLN8-209ENST00000635970 RTF1Q92541 710 aaKnown RBP19.8■□□□□ 0.76
CLN8-209ENST00000635970 ASAP1Q9ULH1 1129 aa19.8■□□□□ 0.76
CLN8-209ENST00000635970 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
CLN8-209ENST00000635970 APAF1O14727 1248 aa19.79■□□□□ 0.76
CLN8-209ENST00000635970 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.79■□□□□ 0.76
CLN8-209ENST00000635970 CRBNQ96SW2 442 aa19.79■□□□□ 0.76
CLN8-209ENST00000635970 THUMPD2Q9BTF0 503 aaKnown RBP19.79■□□□□ 0.76
CLN8-209ENST00000635970 PALLDQ8WX93 1383 aa19.79■□□□□ 0.76
CLN8-209ENST00000635970 PROM2Q8N271 834 aa19.79■□□□□ 0.76
CLN8-209ENST00000635970 KCNQ4P56696 695 aa19.78■□□□□ 0.76
CLN8-209ENST00000635970 KDM2BQ8NHM5 1336 aa19.78■□□□□ 0.76
CLN8-209ENST00000635970 UBR2Q8IWV8 1755 aa19.78■□□□□ 0.76
CLN8-209ENST00000635970 TAF1LQ8IZX4 1826 aa19.78■□□□□ 0.76
CLN8-209ENST00000635970 ATG3Q9NT62 314 aa19.77■□□□□ 0.76
CLN8-209ENST00000635970 TEFQ10587 303 aa19.77■□□□□ 0.75
CLN8-209ENST00000635970 TXNRD1Q16881 649 aa19.77■□□□□ 0.75
CLN8-209ENST00000635970 C5P01031 1676 aa19.76■□□□□ 0.75
CLN8-209ENST00000635970 HTATSF1O43719 755 aaKnown RBP19.76■□□□□ 0.75
CLN8-209ENST00000635970 SLC39A6Q13433 755 aa19.75■□□□□ 0.75
CLN8-209ENST00000635970 LRRC4BQ9NT99 713 aa19.75■□□□□ 0.75
CLN8-209ENST00000635970 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
CLN8-209ENST00000635970 KDM3BQ7LBC6 1761 aa19.74■□□□□ 0.75
CLN8-209ENST00000635970 KCPQ6ZWJ8 1503 aa19.74■□□□□ 0.75
CLN8-209ENST00000635970 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
CLN8-209ENST00000635970 TJP1Q07157 1748 aa19.73■□□□□ 0.75
CLN8-209ENST00000635970 PLIN1O60240 522 aa19.73■□□□□ 0.75
CLN8-209ENST00000635970 SMARCC1Q92922 1105 aaPredicted RBP19.73■□□□□ 0.75
CLN8-209ENST00000635970 DAXXQ9UER7 740 aaPredicted RBP19.72■□□□□ 0.75
CLN8-209ENST00000635970 CCNL1Q9UK58 526 aaPredicted RBP19.72■□□□□ 0.75
CLN8-209ENST00000635970 COL5A3P25940 1745 aaPredicted RBP19.72■□□□□ 0.75
CLN8-209ENST00000635970 LMOD3Q0VAK6 560 aa19.72■□□□□ 0.75
CLN8-209ENST00000635970 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
CLN8-209ENST00000635970 ZNF521Q96K83 1311 aa19.71■□□□□ 0.75
CLN8-209ENST00000635970 ZNF831Q5JPB2 1677 aa19.71■□□□□ 0.75
CLN8-209ENST00000635970 TUBGCP6Q96RT7 1819 aa19.71■□□□□ 0.75
CLN8-209ENST00000635970 PTCD1O75127 700 aaKnown RBP19.71■□□□□ 0.75
CLN8-209ENST00000635970 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
CLN8-209ENST00000635970 LOC102724428A0A0B4J2F2 783 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 BTBD11A6QL63 1104 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 SIK1P57059 783 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 DUSP27Q5VZP5 1158 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 NGEFQ8N5V2 710 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 SLC4A9Q96Q91 983 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 MIS18AQ9NYP9 233 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 KCNQ3O43525 872 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 GOLGA2Q08379 1002 aa19.7■□□□□ 0.74
CLN8-209ENST00000635970 ANO8Q9HCE9 1232 aaPredicted RBP19.7■□□□□ 0.74
CLN8-209ENST00000635970 CICQ96RK0 1608 aaPredicted RBP19.69■□□□□ 0.74
CLN8-209ENST00000635970 C4BP0C0L5 1744 aa19.69■□□□□ 0.74
CLN8-209ENST00000635970 SLC27A3Q5K4L6 730 aa19.69■□□□□ 0.74
CLN8-209ENST00000635970 ZNF790Q6PG37 636 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms