RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 LRP6O75581 1613 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 KIF16BQ96L93 1317 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 VAMP4O75379 141 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 IL2RBP14784 551 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 BRPF1P55201 1214 aaPredicted RBP9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 TEFQ10587 303 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 IFNL2Q8IZJ0 200 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 AFF2P51816 1311 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 PCDH11XQ9BZA7 1347 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 PCDH11YQ9BZA8 1340 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 IPO8O15397 1037 aaKnown RBP9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 PHKG2P15735 406 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 C8orf58Q8NAV2 365 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 ZCRB1Q8TBF4 217 aaKnown RBP9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 SSH1Q8WYL5 1049 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 CHMP4AQ9BY43 222 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 LGR6Q9HBX8 967 aa9.67□□□□□ -0.86
PTP4A1-206ENST00000627002 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 ZKSCAN2Q63HK3 967 aa9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 MPRIPQ6WCQ1 1025 aa9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 TSPYL6Q8N831 410 aa9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 FRAT1Q92837 279 aaPredicted RBP9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 NGLY1Q96IV0 654 aa9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 DCAF5Q96JK2 942 aa9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 BCL2L13Q9BXK5 485 aa9.66□□□□□ -0.86
PTP4A1-206ENST00000627002 PARP4Q9UKK3 1724 aaKnown RBP9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 BTBD11A6QL63 1104 aa9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 AAMPQ13685 434 aa9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 C20orf194Q5TEA3 1177 aa9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 EXOC6Q8TAG9 804 aa9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 C8orf37Q96NL8 207 aa9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 CRBNQ96SW2 442 aa9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 QTRT2Q9H974 415 aaKnown RBP9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 MIS18AQ9NYP9 233 aa9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 THRAP3Q9Y2W1 955 aaKnown RBP9.65□□□□□ -0.86
PTP4A1-206ENST00000627002 PKD1L3Q7Z443 1732 aa9.65□□□□□ -0.87
PTP4A1-206ENST00000627002 SPDYE2BA6NHP3 402 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 ELL2O00472 640 aaPredicted RBP9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 CYP27B1O15528 508 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 HOXB7P09629 217 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 SPDYE6P0CI01 402 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 SPDYE2Q495Y8 402 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 ATF7IPQ6VMQ6 1270 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 FTSJ3Q8IY81 847 aaKnown RBP9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 PELP1Q8IZL8 1130 aaKnown RBP9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 MRPL50Q8N5N7 158 aaKnown RBP9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 SLC52A2Q9HAB3 445 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 ADAMTS7Q9UKP4 1686 aa9.64□□□□□ -0.87
PTP4A1-206ENST00000627002 SLIT2O94813 1529 aa9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 PITPNM1O00562 1244 aa9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 NKX1-1Q15270 411 aaPredicted RBP9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 DZIP1LQ8IYY4 767 aaKnown RBP9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 CCDC136Q96JN2 1154 aa9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 USP35Q9P2H5 1018 aa9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 DISP2A7MBM2 1401 aa9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 KDM6AO15550 1401 aaPredicted RBP9.63□□□□□ -0.87
PTP4A1-206ENST00000627002 SPATA31A1Q5TZJ5 1347 aa9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 MRC1P22897 1456 aa9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 ERVV-2B6SEH9 535 aa9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 TRIM27P14373 513 aa9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 EIF4A1P60842 406 aaKnown RBP9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 KRT24Q2M2I5 525 aa9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 CCDC30Q5VVM6 783 aa9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 STK31Q9BXU1 1019 aa9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 API5Q9BZZ5 524 aaKnown RBP9.62□□□□□ -0.87
PTP4A1-206ENST00000627002 PLCH1Q4KWH8 1693 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 PTPRCP08575 1304 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 EXOC5O00471 708 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 CABP4P57796 275 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 UNC5CLQ8IV45 518 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 PANK1Q8TE04 598 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 NWD2Q9ULI1 1742 aa9.61□□□□□ -0.87
PTP4A1-206ENST00000627002 SPATA31A5Q5VU36 1347 aa9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 SPATA31A7Q8IWB4 1347 aa9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 NRAPQ86VF7 1730 aa9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 MVPQ14764 893 aaKnown RBP9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 BARGINQ6ZT62 677 aa9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 NFATC2IPQ8NCF5 419 aa9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 DDX54Q8TDD1 881 aaKnown RBP9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 CHMP4BQ9H444 224 aaKnown RBP9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
PTP4A1-206ENST00000627002 RGS12O14924 1447 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 RLBP1P12271 317 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 VPS72Q15906 364 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 ZNF790Q6PG37 636 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 CLUAP1Q96AJ1 413 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 TRPC5Q9UL62 973 aaPredicted RBP9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 DDX19BQ9UMR2 479 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 CCDC9Q9Y3X0 531 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms