RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 APBA3O96018 575 aa12.78□□□□□ -0.36
LINC01560-202ENST00000624822 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
LINC01560-202ENST00000624822 DEFB132Q7Z7B7 95 aa12.78□□□□□ -0.36
LINC01560-202ENST00000624822 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
LINC01560-202ENST00000624822 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
LINC01560-202ENST00000624822 BCL9O00512 1426 aa12.78□□□□□ -0.36
LINC01560-202ENST00000624822 ANP32CO43423 234 aa12.77□□□□□ -0.37
LINC01560-202ENST00000624822 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
LINC01560-202ENST00000624822 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC01560-202ENST00000624822 RREB1Q92766 1687 aa12.77□□□□□ -0.37
LINC01560-202ENST00000624822 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 CYP27B1O15528 508 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 KCNQ2O43526 872 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
LINC01560-202ENST00000624822 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
LINC01560-202ENST00000624822 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
LINC01560-202ENST00000624822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC01560-202ENST00000624822 PLEKHG2Q9H7P9 1386 aa12.76□□□□□ -0.37
LINC01560-202ENST00000624822 FKBP8Q14318 412 aa12.75□□□□□ -0.37
LINC01560-202ENST00000624822 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
LINC01560-202ENST00000624822 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
LINC01560-202ENST00000624822 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
LINC01560-202ENST00000624822 ATMINO43313 823 aaPredicted RBP12.74□□□□□ -0.37
LINC01560-202ENST00000624822 PHKG2P15735 406 aa12.74□□□□□ -0.37
LINC01560-202ENST00000624822 PTF1AQ7RTS3 328 aa12.74□□□□□ -0.37
LINC01560-202ENST00000624822 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
LINC01560-202ENST00000624822 NEFMP07197 916 aa12.73□□□□□ -0.37
LINC01560-202ENST00000624822 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
LINC01560-202ENST00000624822 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
LINC01560-202ENST00000624822 EZH2Q15910 746 aaKnown RBP12.73□□□□□ -0.37
LINC01560-202ENST00000624822 KIF12Q96FN5 646 aa12.73□□□□□ -0.37
LINC01560-202ENST00000624822 LY75O60449 1722 aa12.72□□□□□ -0.37
LINC01560-202ENST00000624822 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
LINC01560-202ENST00000624822 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
LINC01560-202ENST00000624822 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
LINC01560-202ENST00000624822 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
LINC01560-202ENST00000624822 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC01560-202ENST00000624822 MTHFSDQ2M296 383 aaKnown RBP12.71□□□□□ -0.37
LINC01560-202ENST00000624822 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
LINC01560-202ENST00000624822 FCHSD2O94868 740 aa12.7□□□□□ -0.38
LINC01560-202ENST00000624822 NKX1-1Q15270 411 aaPredicted RBP12.7□□□□□ -0.38
LINC01560-202ENST00000624822 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
LINC01560-202ENST00000624822 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
LINC01560-202ENST00000624822 TMOD3Q9NYL9 352 aa12.7□□□□□ -0.38
LINC01560-202ENST00000624822 PLSCR1O15162 318 aa12.69□□□□□ -0.38
LINC01560-202ENST00000624822 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
LINC01560-202ENST00000624822 CAMKK2Q96RR4 588 aa12.69□□□□□ -0.38
LINC01560-202ENST00000624822 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
LINC01560-202ENST00000624822 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
LINC01560-202ENST00000624822 KDM6AO15550 1401 aaPredicted RBP12.69□□□□□ -0.38
LINC01560-202ENST00000624822 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
LINC01560-202ENST00000624822 TAF1LQ8IZX4 1826 aa12.68□□□□□ -0.38
LINC01560-202ENST00000624822 MAP3K13O43283 966 aa12.68□□□□□ -0.38
LINC01560-202ENST00000624822 CABP4P57796 275 aa12.68□□□□□ -0.38
LINC01560-202ENST00000624822 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
LINC01560-202ENST00000624822 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
LINC01560-202ENST00000624822 C5P01031 1676 aa12.67□□□□□ -0.38
LINC01560-202ENST00000624822 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
LINC01560-202ENST00000624822 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
LINC01560-202ENST00000624822 TXNRD1Q16881 649 aa12.67□□□□□ -0.38
LINC01560-202ENST00000624822 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
LINC01560-202ENST00000624822 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
LINC01560-202ENST00000624822 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
LINC01560-202ENST00000624822 PIGBQ92521 554 aa12.66□□□□□ -0.38
LINC01560-202ENST00000624822 MRS2Q9HD23 443 aa12.66□□□□□ -0.38
LINC01560-202ENST00000624822 RNMTO43148 476 aaKnown RBP12.65□□□□□ -0.38
LINC01560-202ENST00000624822 NBPF14Q5TI25 921 aa12.65□□□□□ -0.38
LINC01560-202ENST00000624822 CCDC146Q8IYE0 955 aa12.65□□□□□ -0.38
LINC01560-202ENST00000624822 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
LINC01560-202ENST00000624822 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
LINC01560-202ENST00000624822 PAPPAQ13219 1627 aa12.65□□□□□ -0.38
LINC01560-202ENST00000624822 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
LINC01560-202ENST00000624822 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
LINC01560-202ENST00000624822 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
LINC01560-202ENST00000624822 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
LINC01560-202ENST00000624822 MRC1P22897 1456 aa12.64□□□□□ -0.39
LINC01560-202ENST00000624822 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
LINC01560-202ENST00000624822 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
LINC01560-202ENST00000624822 TEFQ10587 303 aa12.63□□□□□ -0.39
LINC01560-202ENST00000624822 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
LINC01560-202ENST00000624822 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
LINC01560-202ENST00000624822 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
LINC01560-202ENST00000624822 ADAMTS8Q9UP79 889 aa12.63□□□□□ -0.39
LINC01560-202ENST00000624822 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
LINC01560-202ENST00000624822 KCNQ4P56696 695 aa12.62□□□□□ -0.39
LINC01560-202ENST00000624822 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
LINC01560-202ENST00000624822 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
LINC01560-202ENST00000624822 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
LINC01560-202ENST00000624822 ASAP1Q9ULH1 1129 aa12.62□□□□□ -0.39
LINC01560-202ENST00000624822 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
LINC01560-202ENST00000624822 C7P10643 843 aa12.61□□□□□ -0.39
LINC01560-202ENST00000624822 NUBP1P53384 320 aa12.61□□□□□ -0.39
LINC01560-202ENST00000624822 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
LINC01560-202ENST00000624822 NEUROD2Q15784 382 aa12.61□□□□□ -0.39
LINC01560-202ENST00000624822 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
LINC01560-202ENST00000624822 MCM10Q7L590 875 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms