RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
NPHP4-211ENST00000622020 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.19■□□□□ 0.66
NPHP4-211ENST00000622020 LRRCC1Q9C099 1032 aa19.19■□□□□ 0.66
NPHP4-211ENST00000622020 NUTM2GQ5VZR2 741 aa19.19■□□□□ 0.66
NPHP4-211ENST00000622020 NOL7Q9UMY1 257 aaKnown RBP19.19■□□□□ 0.66
NPHP4-211ENST00000622020 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
NPHP4-211ENST00000622020 ACEP12821 1306 aa19.19■□□□□ 0.66
NPHP4-211ENST00000622020 ZNF830Q96NB3 372 aaPredicted RBP19.19■□□□□ 0.66
NPHP4-211ENST00000622020 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
NPHP4-211ENST00000622020 CLTCQ00610 1675 aaKnown RBP19.18■□□□□ 0.66
NPHP4-211ENST00000622020 HAP1P54257 671 aaPredicted RBP19.18■□□□□ 0.66
NPHP4-211ENST00000622020 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
NPHP4-211ENST00000622020 LRRFIP2Q9Y608 721 aaKnown RBP19.18■□□□□ 0.66
NPHP4-211ENST00000622020 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
NPHP4-211ENST00000622020 PLCB2Q00722 1185 aa19.17■□□□□ 0.66
NPHP4-211ENST00000622020 LTV1Q96GA3 475 aaPredicted RBP19.17■□□□□ 0.66
NPHP4-211ENST00000622020 TTC21BQ7Z4L5 1316 aa19.17■□□□□ 0.66
NPHP4-211ENST00000622020 KIF24Q5T7B8 1368 aa19.16■□□□□ 0.66
NPHP4-211ENST00000622020 UQCRHLA0A096LP55 91 aa19.16■□□□□ 0.66
NPHP4-211ENST00000622020 UQCRHP07919 91 aa19.16■□□□□ 0.66
NPHP4-211ENST00000622020 CHMLP26374 656 aa19.16■□□□□ 0.66
NPHP4-211ENST00000622020 PDLIM2Q96JY6 352 aa19.16■□□□□ 0.66
NPHP4-211ENST00000622020 MCCP23508 829 aa19.16■□□□□ 0.66
NPHP4-211ENST00000622020 JARID2Q92833 1246 aaPredicted RBP19.16■□□□□ 0.66
NPHP4-211ENST00000622020 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
NPHP4-211ENST00000622020 CCT4P50991 539 aaKnown RBP19.15■□□□□ 0.66
NPHP4-211ENST00000622020 FAM69CQ0P6D2 419 aa19.15■□□□□ 0.66
NPHP4-211ENST00000622020 FLIIQ13045 1269 aa19.15■□□□□ 0.66
NPHP4-211ENST00000622020 ZKSCAN5Q9Y2L8 839 aa19.15■□□□□ 0.66
NPHP4-211ENST00000622020 BRD1O95696 1058 aa19.14■□□□□ 0.66
NPHP4-211ENST00000622020 NEO1Q92859 1461 aa19.14■□□□□ 0.65
NPHP4-211ENST00000622020 CPA1P15085 419 aa19.14■□□□□ 0.65
NPHP4-211ENST00000622020 DNTTIP2Q5QJE6 756 aaKnown RBP19.14■□□□□ 0.65
NPHP4-211ENST00000622020 DDX54Q8TDD1 881 aaKnown RBP19.14■□□□□ 0.65
NPHP4-211ENST00000622020 USP48Q86UV5 1035 aa19.14■□□□□ 0.65
NPHP4-211ENST00000622020 A2ML1A8K2U0 1454 aa19.13■□□□□ 0.65
NPHP4-211ENST00000622020 AMPHP49418 695 aa19.13■□□□□ 0.65
NPHP4-211ENST00000622020 PDCL3Q9H2J4 239 aa19.13■□□□□ 0.65
NPHP4-211ENST00000622020 TSPY26PQ9H489 355 aa19.13■□□□□ 0.65
NPHP4-211ENST00000622020 ESF1Q9H501 851 aaKnown RBP19.13■□□□□ 0.65
NPHP4-211ENST00000622020 C17orf53Q8N3J3 647 aaPredicted RBP19.12■□□□□ 0.65
NPHP4-211ENST00000622020 SLC26A8Q96RN1 970 aa19.12■□□□□ 0.65
NPHP4-211ENST00000622020 OSBPL3Q9H4L5 887 aa19.12■□□□□ 0.65
NPHP4-211ENST00000622020 MBD3O95983 291 aa19.11■□□□□ 0.65
NPHP4-211ENST00000622020 EIF2S2P20042 333 aaKnown RBP19.11■□□□□ 0.65
NPHP4-211ENST00000622020 TSC1Q92574 1164 aa19.11■□□□□ 0.65
NPHP4-211ENST00000622020 KIAA0232Q92628 1395 aa19.11■□□□□ 0.65
NPHP4-211ENST00000622020 SURF6O75683 361 aaKnown RBP19.11■□□□□ 0.65
NPHP4-211ENST00000622020 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
NPHP4-211ENST00000622020 PHAXQ9H814 394 aaKnown RBP19.1■□□□□ 0.65
NPHP4-211ENST00000622020 CNPY2Q9Y2B0 182 aa19.1■□□□□ 0.65
NPHP4-211ENST00000622020 EYA1Q99502 592 aa19.1■□□□□ 0.65
NPHP4-211ENST00000622020 CRB1P82279 1406 aa19.09■□□□□ 0.65
NPHP4-211ENST00000622020 ZNF500O60304 480 aaPredicted RBP19.09■□□□□ 0.65
NPHP4-211ENST00000622020 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
NPHP4-211ENST00000622020 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
NPHP4-211ENST00000622020 CCDC39Q9UFE4 941 aa19.09■□□□□ 0.65
NPHP4-211ENST00000622020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.09■□□□□ 0.65
NPHP4-211ENST00000622020 FAM177BA6PVY3 158 aa19.08■□□□□ 0.65
NPHP4-211ENST00000622020 FIBPO43427 364 aa19.08■□□□□ 0.65
NPHP4-211ENST00000622020 USHBP1Q8N6Y0 703 aa19.08■□□□□ 0.65
NPHP4-211ENST00000622020 GNAI3P08754 354 aa19.08■□□□□ 0.64
NPHP4-211ENST00000622020 CUL4AQ13619 759 aa19.08■□□□□ 0.64
NPHP4-211ENST00000622020 HS1BP3Q53T59 392 aa19.08■□□□□ 0.64
NPHP4-211ENST00000622020 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
NPHP4-211ENST00000622020 SRCIN1Q9C0H9 1055 aa19.08■□□□□ 0.64
NPHP4-211ENST00000622020 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
NPHP4-211ENST00000622020 ANXA1P04083 346 aa19.07■□□□□ 0.64
NPHP4-211ENST00000622020 UBTFL1P0CB47 393 aaPredicted RBP19.07■□□□□ 0.64
NPHP4-211ENST00000622020 TTC12Q9H892 705 aaPredicted RBP19.07■□□□□ 0.64
NPHP4-211ENST00000622020 CHMP3Q9Y3E7 222 aa19.07■□□□□ 0.64
NPHP4-211ENST00000622020 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
NPHP4-211ENST00000622020 USP44Q9H0E7 712 aa19.07■□□□□ 0.64
NPHP4-211ENST00000622020 SALL3Q9BXA9 1300 aa19.07■□□□□ 0.64
NPHP4-211ENST00000622020 MCM2P49736 904 aa19.06■□□□□ 0.64
NPHP4-211ENST00000622020 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
NPHP4-211ENST00000622020 REREQ9P2R6 1566 aa19.06■□□□□ 0.64
NPHP4-211ENST00000622020 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
NPHP4-211ENST00000622020 C14orf37Q86TY3 774 aa19.06■□□□□ 0.64
NPHP4-211ENST00000622020 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
NPHP4-211ENST00000622020 RASEFQ8IZ41 740 aa19.06■□□□□ 0.64
NPHP4-211ENST00000622020 SYAP1Q96A49 352 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-211ENST00000622020 RICTORQ6R327 1708 aa19.04■□□□□ 0.64
NPHP4-211ENST00000622020 SRGAP3O43295 1099 aa19.04■□□□□ 0.64
NPHP4-211ENST00000622020 AK2P54819 239 aa19.03■□□□□ 0.64
NPHP4-211ENST00000622020 RIMS1Q86UR5 1692 aaKnown RBP19.03■□□□□ 0.64
NPHP4-211ENST00000622020 NBPF7P0C2Y1 421 aaPredicted RBP19.03■□□□□ 0.64
NPHP4-211ENST00000622020 WDR33Q9C0J8 1336 aaKnown RBP19.02■□□□□ 0.64
NPHP4-211ENST00000622020 NLRP6P59044 892 aa19.02■□□□□ 0.64
NPHP4-211ENST00000622020 OS9Q13438 667 aaPredicted RBP19.02■□□□□ 0.64
NPHP4-211ENST00000622020 HDGFL1Q5TGJ6 251 aa19.02■□□□□ 0.64
NPHP4-211ENST00000622020 GIMAP6Q6P9H5 292 aa19.02■□□□□ 0.64
NPHP4-211ENST00000622020 INTS4Q96HW7 963 aaKnown RBP19.02■□□□□ 0.64
NPHP4-211ENST00000622020 IL17REQ8NFR9 667 aa19.02■□□□□ 0.63
NPHP4-211ENST00000622020 DLC1Q96QB1 1528 aa19.02■□□□□ 0.63
NPHP4-211ENST00000622020 LARGE1O95461 756 aa19.01■□□□□ 0.63
NPHP4-211ENST00000622020 ADCY5O95622 1261 aa19.01■□□□□ 0.63
NPHP4-211ENST00000622020 KIAA2012Q0VF49 1180 aa19.01■□□□□ 0.63
NPHP4-211ENST00000622020 SNX14Q9Y5W7 946 aa19.01■□□□□ 0.63
NPHP4-211ENST00000622020 GNAT3A8MTJ3 354 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms