RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
MUC1-229ENST00000620770 LGR6Q9HBX8 967 aa17.79■□□□□ 0.44
MUC1-229ENST00000620770 STK32BQ9NY57 414 aa17.79■□□□□ 0.44
MUC1-229ENST00000620770 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
MUC1-229ENST00000620770 DCTN1Q14203 1278 aa17.78■□□□□ 0.44
MUC1-229ENST00000620770 MCM10Q7L590 875 aa17.78■□□□□ 0.44
MUC1-229ENST00000620770 PPP1R1BQ9UD71 204 aaPredicted RBP17.78■□□□□ 0.44
MUC1-229ENST00000620770 CABP4P57796 275 aa17.77■□□□□ 0.44
MUC1-229ENST00000620770 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
MUC1-229ENST00000620770 LY75O60449 1722 aa17.77■□□□□ 0.44
MUC1-229ENST00000620770 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
MUC1-229ENST00000620770 QSER1Q2KHR3 1735 aa17.76■□□□□ 0.43
MUC1-229ENST00000620770 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
MUC1-229ENST00000620770 SALL2Q9Y467 1007 aaPredicted RBP17.76■□□□□ 0.43
MUC1-229ENST00000620770 SCN11AQ9UI33 1791 aa17.76■□□□□ 0.43
MUC1-229ENST00000620770 IL17REQ8NFR9 667 aa17.75■□□□□ 0.43
MUC1-229ENST00000620770 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
MUC1-229ENST00000620770 LMOD3Q0VAK6 560 aa17.74■□□□□ 0.43
MUC1-229ENST00000620770 TEFQ10587 303 aa17.74■□□□□ 0.43
MUC1-229ENST00000620770 SLC15A2Q16348 729 aa17.74■□□□□ 0.43
MUC1-229ENST00000620770 VIRMAQ69YN4 1812 aaKnown RBP17.73■□□□□ 0.43
MUC1-229ENST00000620770 NFATC2IPQ8NCF5 419 aa17.73■□□□□ 0.43
MUC1-229ENST00000620770 PIGBQ92521 554 aa17.73■□□□□ 0.43
MUC1-229ENST00000620770 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
MUC1-229ENST00000620770 ITGB4P16144 1822 aa17.72■□□□□ 0.43
MUC1-229ENST00000620770 TUBGCP6Q96RT7 1819 aa17.72■□□□□ 0.43
MUC1-229ENST00000620770 MRC1P22897 1456 aa17.72■□□□□ 0.43
MUC1-229ENST00000620770 HTATSF1O43719 755 aaKnown RBP17.72■□□□□ 0.43
MUC1-229ENST00000620770 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
MUC1-229ENST00000620770 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
MUC1-229ENST00000620770 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
MUC1-229ENST00000620770 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
MUC1-229ENST00000620770 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
MUC1-229ENST00000620770 PDGFDQ9GZP0 370 aaPredicted RBP17.7■□□□□ 0.42
MUC1-229ENST00000620770 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
MUC1-229ENST00000620770 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
MUC1-229ENST00000620770 C5P01031 1676 aa17.67■□□□□ 0.42
MUC1-229ENST00000620770 PALLDQ8WX93 1383 aa17.67■□□□□ 0.42
MUC1-229ENST00000620770 MTFR1LQ9H019 292 aa17.67■□□□□ 0.42
MUC1-229ENST00000620770 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
MUC1-229ENST00000620770 LRRC4BQ9NT99 713 aa17.67■□□□□ 0.42
MUC1-229ENST00000620770 MIS18AQ9NYP9 233 aa17.67■□□□□ 0.42
MUC1-229ENST00000620770 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
MUC1-229ENST00000620770 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
MUC1-229ENST00000620770 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
MUC1-229ENST00000620770 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
MUC1-229ENST00000620770 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
MUC1-229ENST00000620770 TAF1LQ8IZX4 1826 aa17.65■□□□□ 0.42
MUC1-229ENST00000620770 DCAF8L1A6NGE4 600 aa17.65■□□□□ 0.42
MUC1-229ENST00000620770 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
MUC1-229ENST00000620770 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
MUC1-229ENST00000620770 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
MUC1-229ENST00000620770 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
MUC1-229ENST00000620770 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.41
MUC1-229ENST00000620770 PTGER2P43116 358 aa17.64■□□□□ 0.41
MUC1-229ENST00000620770 WWC1Q8IX03 1113 aa17.64■□□□□ 0.41
MUC1-229ENST00000620770 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
MUC1-229ENST00000620770 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.41
MUC1-229ENST00000620770 KCNQ3O43525 872 aa17.63■□□□□ 0.41
MUC1-229ENST00000620770 KCNQ4P56696 695 aa17.63■□□□□ 0.41
MUC1-229ENST00000620770 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
MUC1-229ENST00000620770 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
MUC1-229ENST00000620770 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
MUC1-229ENST00000620770 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
MUC1-229ENST00000620770 CCNL1Q9UK58 526 aaPredicted RBP17.62■□□□□ 0.41
MUC1-229ENST00000620770 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
MUC1-229ENST00000620770 LOC102724428A0A0B4J2F2 783 aa17.6■□□□□ 0.41
MUC1-229ENST00000620770 SIK1P57059 783 aa17.6■□□□□ 0.41
MUC1-229ENST00000620770 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
MUC1-229ENST00000620770 TFCP2L1Q9NZI6 479 aa17.6■□□□□ 0.41
MUC1-229ENST00000620770 KCPQ6ZWJ8 1503 aa17.6■□□□□ 0.41
MUC1-229ENST00000620770 PNPLA7Q6ZV29 1317 aa17.59■□□□□ 0.41
MUC1-229ENST00000620770 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
MUC1-229ENST00000620770 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
MUC1-229ENST00000620770 SLC16A10Q8TF71 515 aa17.59■□□□□ 0.41
MUC1-229ENST00000620770 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
MUC1-229ENST00000620770 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.41
MUC1-229ENST00000620770 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
MUC1-229ENST00000620770 GNAI1P63096 354 aa17.58■□□□□ 0.4
MUC1-229ENST00000620770 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.4
MUC1-229ENST00000620770 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
MUC1-229ENST00000620770 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.4
MUC1-229ENST00000620770 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
MUC1-229ENST00000620770 C4BP0C0L5 1744 aa17.58■□□□□ 0.4
MUC1-229ENST00000620770 CHL1O00533 1208 aa17.57■□□□□ 0.4
MUC1-229ENST00000620770 WDR63Q8IWG1 891 aa17.57■□□□□ 0.4
MUC1-229ENST00000620770 TSR2Q969E8 191 aaKnown RBP17.57■□□□□ 0.4
MUC1-229ENST00000620770 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
MUC1-229ENST00000620770 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
MUC1-229ENST00000620770 ARXQ96QS3 562 aa17.57■□□□□ 0.4
MUC1-229ENST00000620770 FHDC1Q9C0D6 1143 aaPredicted RBP17.57■□□□□ 0.4
MUC1-229ENST00000620770 MBIPQ9NS73 344 aa17.57■□□□□ 0.4
MUC1-229ENST00000620770 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
MUC1-229ENST00000620770 ZNF521Q96K83 1311 aa17.56■□□□□ 0.4
MUC1-229ENST00000620770 ITPK1Q13572 414 aa17.56■□□□□ 0.4
MUC1-229ENST00000620770 HEG1Q9ULI3 1381 aa17.55■□□□□ 0.4
MUC1-229ENST00000620770 POLD1P28340 1107 aa17.55■□□□□ 0.4
MUC1-229ENST00000620770 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
MUC1-229ENST00000620770 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
MUC1-229ENST00000620770 IL16Q14005 1332 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms