RNA–Protein interactions for RNA: ENST00000619640.3

C2orf48-202, Transcript of chromosome 2 open reading frame 48, humanhuman

TSL 1 (best)

Gene C2orf48, Length 480 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf48-202ENST00000619640 PAPPAQ13219 1627 aa20.27■□□□□ 0.83
C2orf48-202ENST00000619640 PALLDQ8WX93 1383 aa20.26■□□□□ 0.83
C2orf48-202ENST00000619640 NFATC2IPQ8NCF5 419 aa20.26■□□□□ 0.83
C2orf48-202ENST00000619640 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
C2orf48-202ENST00000619640 ATG3Q9NT62 314 aa20.25■□□□□ 0.83
C2orf48-202ENST00000619640 ZNF831Q5JPB2 1677 aa20.24■□□□□ 0.83
C2orf48-202ENST00000619640 SLC27A3Q5K4L6 730 aa20.24■□□□□ 0.83
C2orf48-202ENST00000619640 ASAP1Q9ULH1 1129 aa20.24■□□□□ 0.83
C2orf48-202ENST00000619640 TMPOP42166 694 aaKnown RBP20.23■□□□□ 0.83
C2orf48-202ENST00000619640 CCDC146Q8IYE0 955 aa20.23■□□□□ 0.83
C2orf48-202ENST00000619640 MIER1Q8N108 512 aa20.23■□□□□ 0.83
C2orf48-202ENST00000619640 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
C2orf48-202ENST00000619640 CICQ96RK0 1608 aaPredicted RBP20.21■□□□□ 0.83
C2orf48-202ENST00000619640 MCM10Q7L590 875 aa20.2■□□□□ 0.82
C2orf48-202ENST00000619640 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
C2orf48-202ENST00000619640 UBR2Q8IWV8 1755 aa20.2■□□□□ 0.82
C2orf48-202ENST00000619640 TAF1LQ8IZX4 1826 aa20.19■□□□□ 0.82
C2orf48-202ENST00000619640 TEFQ10587 303 aa20.19■□□□□ 0.82
C2orf48-202ENST00000619640 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
C2orf48-202ENST00000619640 KCPQ6ZWJ8 1503 aa20.18■□□□□ 0.82
C2orf48-202ENST00000619640 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
C2orf48-202ENST00000619640 SIK1P57059 783 aa20.18■□□□□ 0.82
C2orf48-202ENST00000619640 RIPK4P57078 832 aa20.18■□□□□ 0.82
C2orf48-202ENST00000619640 SLC4A9Q96Q91 983 aa20.18■□□□□ 0.82
C2orf48-202ENST00000619640 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
C2orf48-202ENST00000619640 CCNL1Q9UK58 526 aaPredicted RBP20.18■□□□□ 0.82
C2orf48-202ENST00000619640 C5P01031 1676 aa20.18■□□□□ 0.82
C2orf48-202ENST00000619640 LMOD3Q0VAK6 560 aa20.17■□□□□ 0.82
C2orf48-202ENST00000619640 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
C2orf48-202ENST00000619640 FAM9BQ8IZU0 186 aa20.16■□□□□ 0.82
C2orf48-202ENST00000619640 TRIM35Q9UPQ4 493 aa20.16■□□□□ 0.82
C2orf48-202ENST00000619640 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
C2orf48-202ENST00000619640 APAF1O14727 1248 aa20.15■□□□□ 0.82
C2orf48-202ENST00000619640 KCNQ4P56696 695 aa20.15■□□□□ 0.82
C2orf48-202ENST00000619640 COL5A3P25940 1745 aaPredicted RBP20.14■□□□□ 0.81
C2orf48-202ENST00000619640 TJP1Q07157 1748 aa20.14■□□□□ 0.81
C2orf48-202ENST00000619640 HMGB2P26583 209 aaKnown RBP20.14■□□□□ 0.81
C2orf48-202ENST00000619640 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
C2orf48-202ENST00000619640 ITPK1Q13572 414 aa20.14■□□□□ 0.81
C2orf48-202ENST00000619640 NBPF14Q5TI25 921 aa20.14■□□□□ 0.81
C2orf48-202ENST00000619640 AKT1S1Q96B36 256 aa20.14■□□□□ 0.81
C2orf48-202ENST00000619640 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
C2orf48-202ENST00000619640 TAF7Q15545 349 aaPredicted RBP20.13■□□□□ 0.81
C2orf48-202ENST00000619640 SLC15A2Q16348 729 aa20.13■□□□□ 0.81
C2orf48-202ENST00000619640 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
C2orf48-202ENST00000619640 KDM3BQ7LBC6 1761 aa20.13■□□□□ 0.81
C2orf48-202ENST00000619640 C4BP0C0L5 1744 aa20.13■□□□□ 0.81
C2orf48-202ENST00000619640 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
C2orf48-202ENST00000619640 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
C2orf48-202ENST00000619640 ZNF827Q17R98 1081 aa20.12■□□□□ 0.81
C2orf48-202ENST00000619640 NGEFQ8N5V2 710 aa20.12■□□□□ 0.81
C2orf48-202ENST00000619640 THUMPD2Q9BTF0 503 aaKnown RBP20.12■□□□□ 0.81
C2orf48-202ENST00000619640 VSIG10Q8N0Z9 540 aa20.11■□□□□ 0.81
C2orf48-202ENST00000619640 LINC00116Q8NCU8 138 aa20.11■□□□□ 0.81
C2orf48-202ENST00000619640 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
C2orf48-202ENST00000619640 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
C2orf48-202ENST00000619640 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
C2orf48-202ENST00000619640 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
C2orf48-202ENST00000619640 STK32BQ9NY57 414 aa20.1■□□□□ 0.81
C2orf48-202ENST00000619640 TUBGCP6Q96RT7 1819 aa20.1■□□□□ 0.81
C2orf48-202ENST00000619640 CASZ1Q86V15 1759 aa20.1■□□□□ 0.81
C2orf48-202ENST00000619640 KCNQ3O43525 872 aa20.09■□□□□ 0.81
C2orf48-202ENST00000619640 R3HDM1Q15032 1099 aaKnown RBP20.09■□□□□ 0.81
C2orf48-202ENST00000619640 TTC5Q8N0Z6 440 aa20.09■□□□□ 0.81
C2orf48-202ENST00000619640 ZNF496Q96IT1 587 aaPredicted RBP20.09■□□□□ 0.81
C2orf48-202ENST00000619640 BABAM1Q9NWV8 329 aa20.09■□□□□ 0.81
C2orf48-202ENST00000619640 HEG1Q9ULI3 1381 aa20.08■□□□□ 0.81
C2orf48-202ENST00000619640 UBR3Q6ZT12 1888 aa20.07■□□□□ 0.8
C2orf48-202ENST00000619640 CNTNAP4Q9C0A0 1308 aa20.06■□□□□ 0.8
C2orf48-202ENST00000619640 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
C2orf48-202ENST00000619640 CALD1Q05682 793 aaKnown RBP20.06■□□□□ 0.8
C2orf48-202ENST00000619640 RC3H1Q5TC82 1133 aaKnown RBP20.06■□□□□ 0.8
C2orf48-202ENST00000619640 FMNL2Q96PY5 1086 aa20.06■□□□□ 0.8
C2orf48-202ENST00000619640 MYH14Q7Z406 1995 aaKnown RBP20.06■□□□□ 0.8
C2orf48-202ENST00000619640 DNAJC10Q8IXB1 793 aa20.05■□□□□ 0.8
C2orf48-202ENST00000619640 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
C2orf48-202ENST00000619640 CHL1O00533 1208 aa20.04■□□□□ 0.8
C2orf48-202ENST00000619640 PNPLA7Q6ZV29 1317 aa20.03■□□□□ 0.8
C2orf48-202ENST00000619640 ZNF853P0CG23 659 aa20.03■□□□□ 0.8
C2orf48-202ENST00000619640 CYP19A1P11511 503 aaPredicted RBP20.02■□□□□ 0.8
C2orf48-202ENST00000619640 EIF4A1P60842 406 aaKnown RBP20.02■□□□□ 0.8
C2orf48-202ENST00000619640 AMIGO3Q86WK7 504 aa20.02■□□□□ 0.8
C2orf48-202ENST00000619640 WWC1Q8IX03 1113 aa20.02■□□□□ 0.8
C2orf48-202ENST00000619640 CFAP44Q96MT7 982 aa20.02■□□□□ 0.8
C2orf48-202ENST00000619640 TEX13AQ9BXU3 409 aaPredicted RBP20.02■□□□□ 0.8
C2orf48-202ENST00000619640 AK7Q96M32 723 aa20.01■□□□□ 0.79
C2orf48-202ENST00000619640 PDGFDQ9GZP0 370 aaPredicted RBP20.01■□□□□ 0.79
C2orf48-202ENST00000619640 TFCP2L1Q9NZI6 479 aa20.01■□□□□ 0.79
C2orf48-202ENST00000619640 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
C2orf48-202ENST00000619640 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
C2orf48-202ENST00000619640 SSFA2P28290 1259 aa20■□□□□ 0.79
C2orf48-202ENST00000619640 CRKLP46109 303 aaKnown RBP20■□□□□ 0.79
C2orf48-202ENST00000619640 INTS5Q6P9B9 1019 aaKnown RBP20■□□□□ 0.79
C2orf48-202ENST00000619640 IFT57Q9NWB7 429 aa20■□□□□ 0.79
C2orf48-202ENST00000619640 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
C2orf48-202ENST00000619640 FLAD1Q8NFF5 587 aa19.99■□□□□ 0.79
C2orf48-202ENST00000619640 COL24A1Q17RW2 1714 aa19.99■□□□□ 0.79
C2orf48-202ENST00000619640 GNPATO15228 680 aa19.98■□□□□ 0.79
C2orf48-202ENST00000619640 GIGYF1O75420 1035 aaPredicted RBP19.98■□□□□ 0.79
C2orf48-202ENST00000619640 RPS6KA4O75676 772 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms