RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 CUL7Q14999 1698 aa13.03□□□□□ -0.32
CCDC144B-208ENST00000618081 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.32
CCDC144B-208ENST00000618081 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.32
CCDC144B-208ENST00000618081 ARHGAP29Q52LW3 1261 aa13.02□□□□□ -0.32
CCDC144B-208ENST00000618081 CABP1Q9NZU7 370 aa13.02□□□□□ -0.32
CCDC144B-208ENST00000618081 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.32
CCDC144B-208ENST00000618081 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.32
CCDC144B-208ENST00000618081 TMOD3Q9NYL9 352 aa13.02□□□□□ -0.32
CCDC144B-208ENST00000618081 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 MAP9Q49MG5 647 aa13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 RAB11FIP3O75154 756 aa13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 BICDL1Q6ZP65 573 aa13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 DYDC1Q8WWB3 177 aa13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 SETD1BQ9UPS6 1966 aaKnown RBP13.02□□□□□ -0.33
CCDC144B-208ENST00000618081 PIBF1Q8WXW3 757 aa13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 MPHOSPH6Q99547 160 aaKnown RBP13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 IFIT1P09914 478 aaKnown RBP13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
CCDC144B-208ENST00000618081 NF2P35240 595 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
CCDC144B-208ENST00000618081 NAPBQ9H115 298 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
CCDC144B-208ENST00000618081 HOOK3Q86VS8 718 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 CFTRP13569 1480 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 IQCA1Q86XH1 822 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 CHMP4BP1P59074 171 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 CFAP100Q494V2 611 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 CETN1Q12798 172 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 AFAP1Q8N556 730 aa13□□□□□ -0.33
CCDC144B-208ENST00000618081 A0A087WZG4 1122 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 GOLGA6L10A0A0M3HER8 536 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 KIF20AO95235 890 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 HMGB1P09429 215 aaKnown RBP12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 GBP3Q9H0R5 595 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 BCAR3O75815 825 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 MAP3K12Q12852 859 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 FERMT1Q9BQL6 677 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 CRACR2AQ9BSW2 395 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 PPM1EQ8WY54 764 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 FERMT2Q96AC1 680 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 MINDY4BA8MYZ0 360 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
CCDC144B-208ENST00000618081 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 ZNF444Q8N0Y2 327 aaPredicted RBP12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 ANKRD30BQ9BXX2 1392 aa12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 KIF2AO00139 706 aaPredicted RBP12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 SLC5A1P13866 664 aa12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 MYZAPP0CAP1 466 aa12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 TAOK3Q9H2K8 898 aa12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
CCDC144B-208ENST00000618081 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 FCHSD2O94868 740 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 TTC21AQ8NDW8 1320 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 KIF5CO60282 957 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 ZSCAN12O43309 604 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
CCDC144B-208ENST00000618081 CCDC12Q8WUD4 166 aaPredicted RBP12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 IGF1RP08069 1367 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 GLRX3O76003 335 aaKnown RBP12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 CTNNA2P26232 953 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 CATIPQ7Z7H3 387 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 PTPN23Q9H3S7 1636 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 CASQ1P31415 396 aa12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
CCDC144B-208ENST00000618081 HOMER2Q9NSB8 354 aa12.96□□□□□ -0.34
CCDC144B-208ENST00000618081 PABPN1LA6NDY0 278 aaKnown RBP12.96□□□□□ -0.34
CCDC144B-208ENST00000618081 STXBP4Q6ZWJ1 553 aa12.96□□□□□ -0.34
CCDC144B-208ENST00000618081 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.34
CCDC144B-208ENST00000618081 COMMD10Q9Y6G5 202 aa12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 LRPPRCP42704 1394 aaKnown RBP12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 IFT140Q96RY7 1462 aa12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 TIAM1Q13009 1591 aa12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 LUZP1Q86V48 1076 aa12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms