RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 DNAAF4Q8WXU2 420 aa10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 SETQ01105 290 aaPredicted RBP10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 AK7Q96M32 723 aa10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 SMC2O95347 1197 aa10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 LARP1BQ659C4 914 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 JAKMIP1Q96N16 626 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 UBAC1Q9BSL1 405 aa10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 TRIM27P14373 513 aa10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 CWC27Q6UX04 472 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 CASTP20810 708 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-207ENST00000615901 XPCQ01831 940 aaPredicted RBP10.77□□□□□ -0.68
SPTBN1-207ENST00000615901 CDR1P51861 262 aa10.77□□□□□ -0.68
SPTBN1-207ENST00000615901 ME1P48163 572 aa10.77□□□□□ -0.68
SPTBN1-207ENST00000615901 IKQ13123 557 aaPredicted RBP10.77□□□□□ -0.68
SPTBN1-207ENST00000615901 TDO2P48775 406 aa10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 FAM13BQ9NYF5 915 aa10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 CBFA2T2O43439 604 aa10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 AIDAQ96BJ3 306 aa10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 SPATA32Q96LK8 384 aa10.77□□□□□ -0.69
SPTBN1-207ENST00000615901 PDE4CQ08493 712 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 HMGB1P09429 215 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 FMNL2Q96PY5 1086 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 ZNF287Q9HBT7 754 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 MYO6Q9UM54 1294 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 FAM177BA6PVY3 158 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 RDXP35241 583 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 PDILTQ8N807 584 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 RUFY1Q96T51 708 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 CEP57L1Q8IYX8 460 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 NAP1L1P55209 391 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 TEX13AQ9BXU3 409 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 FLIIQ13045 1269 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 MAP7D2Q96T17 732 aa10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 MAP4K4O95819 1239 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-207ENST00000615901 OFD1O75665 1012 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 BMP2KLQ5H9B9 411 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 CT47A1Q5JQC4 288 aaPredicted RBP10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 MBIPQ9NS73 344 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 EXOC6BQ9Y2D4 811 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 RNF214Q8ND24 703 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 MIS18AQ9NYP9 233 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 ZC3H6P61129 1189 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 NPATQ14207 1427 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 NEO1Q92859 1461 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 CEP131Q9UPN4 1083 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 MSH6P52701 1360 aa10.75□□□□□ -0.69
SPTBN1-207ENST00000615901 AMER1Q5JTC6 1135 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 LUC7LQ9NQ29 371 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 ERCC4Q92889 916 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 NPC1L1Q9UHC9 1359 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 ACEP12821 1306 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 METTL24Q5JXM2 366 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 CAGE1Q8TC20 777 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 DMRT2Q9Y5R5 561 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 LRRFIP2Q9Y608 721 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 FLT4P35916 1363 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 HSP90B2PQ58FF3 399 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 KRT18P05783 430 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 RAI14Q9P0K7 980 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 STK3Q13188 491 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 HDAC1Q13547 482 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 PREX2Q70Z35 1606 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 IL1RAPL2Q9NP60 686 aa10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 ZNHIT6Q9NWK9 470 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-207ENST00000615901 IFIT5Q13325 482 aaKnown RBP10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 PHAXQ9H814 394 aaKnown RBP10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 LRP2BPQ9P2M1 347 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 YTHDC2Q9H6S0 1430 aaKnown RBP10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 C20orf194Q5TEA3 1177 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 INSRP06213 1382 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 SLC5A1P13866 664 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 CADPS2Q86UW7 1296 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 KDM5DQ9BY66 1539 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 MCM4P33991 863 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 CHD1O14646 1710 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 NUP62CLQ9H1M0 184 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 IFIT1P09914 478 aaKnown RBP10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 SCAND2PQ9GZW5 306 aaPredicted RBP10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 GRPEL1Q9HAV7 217 aa10.73□□□□□ -0.69
SPTBN1-207ENST00000615901 NUTM2BA6NNL0 878 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 NUTM2EB1AL46 878 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 ZPR1O75312 459 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 NUTM2AQ8IVF1 878 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 CCDC196A0A1B0GTZ2 297 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 R3HCC1Q9Y3T6 440 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 ATP10AO60312 1499 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 SF3B2Q13435 895 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 TTF1Q15361 905 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 NUP133Q8WUM0 1156 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 EVI5LQ96CN4 794 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms