RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 RSPH14Q9UHP6 348 aa12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 SPHKAPQ2M3C7 1700 aa12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 RPGRIP1LQ68CZ1 1315 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 PAXBP1Q9Y5B6 917 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 PPIP5K1Q6PFW1 1433 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 CAMK4Q16566 473 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 ABCC3O15438 1527 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 DTNBO60941 627 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 ELF2Q15723 593 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 ZNF215Q9UL58 517 aaPredicted RBP12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 EIF2AK4Q9P2K8 1649 aaKnown RBP12.38□□□□□ -0.43
TNFAIP3-208ENST00000615468 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 APPP05067 770 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 MCM2P49736 904 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 TEX35Q5T0J7 233 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 FRMPD1Q5SYB0 1578 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 KMT5BQ4FZB7 885 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 C10orf67Q8IYJ2 551 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 TRMT1Q9NXH9 659 aaKnown RBP12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 GOLGA6L4A6NEF3 574 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 C14orf37Q86TY3 774 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 RILPL2Q969X0 211 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 NRBP1Q9UHY1 535 aa12.37□□□□□ -0.43
TNFAIP3-208ENST00000615468 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 RNF17Q9BXT8 1623 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 LUZP1Q86V48 1076 aa12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 AP5Z1O43299 807 aa12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 UBE2HP62256 183 aa12.36□□□□□ -0.43
TNFAIP3-208ENST00000615468 PTPN14Q15678 1187 aa12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 MROH1Q8NDA8 1641 aa12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 NEK11Q8NG66 645 aa12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 FEZ2Q9UHY8 353 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 CKAP2LQ8IYA6 745 aa12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-208ENST00000615468 THUMPD2Q9BTF0 503 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 RAD51AP2Q09MP3 1159 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 TSHZ3Q63HK5 1081 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 TRIM35Q9UPQ4 493 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 VPS37CA5D8V6 355 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 GTF2A1P52655 376 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 GORABQ5T7V8 394 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 ATP6V1DQ9Y5K8 247 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
TNFAIP3-208ENST00000615468 DIP2CQ9Y2E4 1556 aa12.33□□□□□ -0.43
TNFAIP3-208ENST00000615468 SLC20A2Q08357 652 aa12.33□□□□□ -0.44
TNFAIP3-208ENST00000615468 SYCP1Q15431 976 aa12.33□□□□□ -0.44
TNFAIP3-208ENST00000615468 ALDH1L2Q3SY69 923 aa12.33□□□□□ -0.44
TNFAIP3-208ENST00000615468 ABCC11Q96J66 1382 aa12.33□□□□□ -0.44
TNFAIP3-208ENST00000615468 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
TNFAIP3-208ENST00000615468 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
TNFAIP3-208ENST00000615468 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
TNFAIP3-208ENST00000615468 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
TNFAIP3-208ENST00000615468 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
TNFAIP3-208ENST00000615468 TEX2Q8IWB9 1127 aa12.32□□□□□ -0.44
TNFAIP3-208ENST00000615468 FAM200AQ8TCP9 573 aa12.32□□□□□ -0.44
TNFAIP3-208ENST00000615468 PALD1Q9ULE6 856 aa12.32□□□□□ -0.44
TNFAIP3-208ENST00000615468 HMOX1P09601 288 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 ZSCAN25Q6NSZ9 544 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 SYNMO15061 1565 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 CFAP74Q9C0B2 1584 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 GPS2Q13227 327 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 TULP2O00295 520 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 GPATCH11Q8N954 259 aa12.31□□□□□ -0.44
TNFAIP3-208ENST00000615468 RBM6P78332 1123 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 DNM1Q05193 864 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 KIF1BO60333 1816 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 ZSCAN22P10073 491 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 GOLGA6L19H0YKK7 550 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 STX6O43752 255 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 EID1Q9Y6B2 187 aa12.3□□□□□ -0.44
TNFAIP3-208ENST00000615468 SLU7O95391 586 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 CYP2C19P33261 490 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms