RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PDRG1Q9NUG6 133 aa17.44■□□□□ 0.38
SNPH-203ENST00000614659 BRPF3Q9ULD4 1205 aa17.44■□□□□ 0.38
SNPH-203ENST00000614659 FYB1O15117 783 aa17.44■□□□□ 0.38
SNPH-203ENST00000614659 IKQ13123 557 aaPredicted RBP17.43■□□□□ 0.38
SNPH-203ENST00000614659 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
SNPH-203ENST00000614659 GLRX3O76003 335 aaKnown RBP17.43■□□□□ 0.38
SNPH-203ENST00000614659 TBX22Q9Y458 520 aa17.43■□□□□ 0.38
SNPH-203ENST00000614659 NME9Q86XW9 330 aa17.43■□□□□ 0.38
SNPH-203ENST00000614659 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
SNPH-203ENST00000614659 DISP1Q96F81 1524 aa17.43■□□□□ 0.38
SNPH-203ENST00000614659 BLOC1S2Q6QNY1 142 aa17.43■□□□□ 0.38
SNPH-203ENST00000614659 ACEP12821 1306 aa17.43■□□□□ 0.38
SNPH-203ENST00000614659 CEP126Q9P2H0 1117 aa17.42■□□□□ 0.38
SNPH-203ENST00000614659 ZFYVE9O95405 1425 aa17.42■□□□□ 0.38
SNPH-203ENST00000614659 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
SNPH-203ENST00000614659 AACSQ86V21 672 aa17.42■□□□□ 0.38
SNPH-203ENST00000614659 TRIM5Q9C035 493 aa17.42■□□□□ 0.38
SNPH-203ENST00000614659 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
SNPH-203ENST00000614659 TRPM2O94759 1503 aa17.42■□□□□ 0.38
SNPH-203ENST00000614659 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
SNPH-203ENST00000614659 FIBPO43427 364 aa17.41■□□□□ 0.38
SNPH-203ENST00000614659 ACBD3Q9H3P7 528 aa17.41■□□□□ 0.38
SNPH-203ENST00000614659 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
SNPH-203ENST00000614659 CFAP45Q9UL16 551 aa17.4■□□□□ 0.38
SNPH-203ENST00000614659 AKAP2Q9Y2D5 859 aa17.4■□□□□ 0.38
SNPH-203ENST00000614659 MNS1Q8NEH6 495 aa17.4■□□□□ 0.38
SNPH-203ENST00000614659 TESK2Q96S53 571 aa17.4■□□□□ 0.38
SNPH-203ENST00000614659 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
SNPH-203ENST00000614659 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
SNPH-203ENST00000614659 CDKL5O76039 1030 aa17.39■□□□□ 0.38
SNPH-203ENST00000614659 STK38Q15208 465 aa17.39■□□□□ 0.38
SNPH-203ENST00000614659 LARP1BQ659C4 914 aaKnown RBP17.39■□□□□ 0.37
SNPH-203ENST00000614659 DACH1Q9UI36 760 aa17.39■□□□□ 0.37
SNPH-203ENST00000614659 RBM5P52756 815 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNPH-203ENST00000614659 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
SNPH-203ENST00000614659 HYPKQ9NX55 129 aa17.39■□□□□ 0.37
SNPH-203ENST00000614659 PCMTD1Q96MG8 357 aaPredicted RBP17.39■□□□□ 0.37
SNPH-203ENST00000614659 BCL11BQ9C0K0 894 aaPredicted RBP17.39■□□□□ 0.37
SNPH-203ENST00000614659 TNMDQ9H2S6 317 aa17.39■□□□□ 0.37
SNPH-203ENST00000614659 MPRIPQ6WCQ1 1025 aa17.38■□□□□ 0.37
SNPH-203ENST00000614659 RPGRQ92834 1020 aaKnown RBP17.38■□□□□ 0.37
SNPH-203ENST00000614659 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
SNPH-203ENST00000614659 NBPF14Q5TI25 921 aa17.38■□□□□ 0.37
SNPH-203ENST00000614659 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
SNPH-203ENST00000614659 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
SNPH-203ENST00000614659 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
SNPH-203ENST00000614659 ZFYVE16Q7Z3T8 1539 aa17.38■□□□□ 0.37
SNPH-203ENST00000614659 MCM10Q7L590 875 aa17.37■□□□□ 0.37
SNPH-203ENST00000614659 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
SNPH-203ENST00000614659 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
SNPH-203ENST00000614659 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
SNPH-203ENST00000614659 NCKAP5LQ9HCH0 1330 aa17.37■□□□□ 0.37
SNPH-203ENST00000614659 FOSBP53539 338 aa17.37■□□□□ 0.37
SNPH-203ENST00000614659 NUCB1Q02818 461 aa17.37■□□□□ 0.37
SNPH-203ENST00000614659 ARHGEF5Q12774 1597 aa17.37■□□□□ 0.37
SNPH-203ENST00000614659 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
SNPH-203ENST00000614659 ZMYM4Q5VZL5 1548 aa17.36■□□□□ 0.37
SNPH-203ENST00000614659 CCDC66A2RUB6 948 aa17.35■□□□□ 0.37
SNPH-203ENST00000614659 PTCD1O75127 700 aaKnown RBP17.35■□□□□ 0.37
SNPH-203ENST00000614659 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
SNPH-203ENST00000614659 FILIP1LQ4L180 1135 aa17.35■□□□□ 0.37
SNPH-203ENST00000614659 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
SNPH-203ENST00000614659 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
SNPH-203ENST00000614659 KCNA6P17658 529 aa17.35■□□□□ 0.37
SNPH-203ENST00000614659 ATP7AQ04656 1500 aa17.35■□□□□ 0.37
SNPH-203ENST00000614659 PDE4CQ08493 712 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 CBFA2T2O43439 604 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 IGHDP01880 384 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 TXLNAP40222 546 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
SNPH-203ENST00000614659 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
SNPH-203ENST00000614659 SMARCE1Q969G3 411 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 SPATA32Q96LK8 384 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 ESPNB1AK53 854 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 WWC2Q6AWC2 1192 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 NUP62CLQ9H1M0 184 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
SNPH-203ENST00000614659 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
SNPH-203ENST00000614659 ST5P78524 1137 aa17.33■□□□□ 0.37
SNPH-203ENST00000614659 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.37
SNPH-203ENST00000614659 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.37
SNPH-203ENST00000614659 C8orf37Q96NL8 207 aa17.33■□□□□ 0.36
SNPH-203ENST00000614659 HMGB1P09429 215 aaKnown RBP17.33■□□□□ 0.36
SNPH-203ENST00000614659 TTC22Q5TAA0 569 aa17.33■□□□□ 0.36
SNPH-203ENST00000614659 WASF1Q92558 559 aa17.33■□□□□ 0.36
SNPH-203ENST00000614659 IL1RAPL2Q9NP60 686 aa17.33■□□□□ 0.36
SNPH-203ENST00000614659 CWC15Q9P013 229 aaKnown RBP17.33■□□□□ 0.36
SNPH-203ENST00000614659 RFC4P35249 363 aa17.33■□□□□ 0.36
SNPH-203ENST00000614659 DNAAF4Q8WXU2 420 aa17.33■□□□□ 0.36
SNPH-203ENST00000614659 DDB1Q16531 1140 aa17.32■□□□□ 0.36
SNPH-203ENST00000614659 ZSCAN30Q86W11 494 aa17.32■□□□□ 0.36
SNPH-203ENST00000614659 SIL1Q9H173 461 aa17.32■□□□□ 0.36
SNPH-203ENST00000614659 SMC2O95347 1197 aa17.32■□□□□ 0.36
SNPH-203ENST00000614659 HSPA2P54652 639 aa17.32■□□□□ 0.36
SNPH-203ENST00000614659 ERCC4Q92889 916 aaPredicted RBP17.32■□□□□ 0.36
SNPH-203ENST00000614659 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
SNPH-203ENST00000614659 MAP4K4O95819 1239 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms