RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
GGA3-220ENST00000613421 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
GGA3-220ENST00000613421 PDILTQ8N807 584 aa16.32■□□□□ 0.2
GGA3-220ENST00000613421 NACAP1Q9BZK3 213 aa16.32■□□□□ 0.2
GGA3-220ENST00000613421 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
GGA3-220ENST00000613421 TNRQ92752 1358 aa16.32■□□□□ 0.2
GGA3-220ENST00000613421 SYCE3A1L190 88 aa16.32■□□□□ 0.2
GGA3-220ENST00000613421 MEX3CQ5U5Q3 659 aaKnown RBP16.32■□□□□ 0.2
GGA3-220ENST00000613421 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
GGA3-220ENST00000613421 MAGI3Q5TCQ9 1506 aa16.31■□□□□ 0.2
GGA3-220ENST00000613421 ABCC2Q92887 1545 aa16.31■□□□□ 0.2
GGA3-220ENST00000613421 TNNT3P45378 269 aaPredicted RBP16.31■□□□□ 0.2
GGA3-220ENST00000613421 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
GGA3-220ENST00000613421 MTERF4Q7Z6M4 381 aaKnown RBP16.31■□□□□ 0.2
GGA3-220ENST00000613421 CCDC83Q8IWF9 413 aa16.31■□□□□ 0.2
GGA3-220ENST00000613421 MYD88Q99836 296 aa16.31■□□□□ 0.2
GGA3-220ENST00000613421 NUP62CLQ9H1M0 184 aa16.31■□□□□ 0.2
GGA3-220ENST00000613421 MAP7D2Q96T17 732 aa16.31■□□□□ 0.2
GGA3-220ENST00000613421 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
GGA3-220ENST00000613421 BOLA2Q9H3K6 86 aa16.31■□□□□ 0.2
GGA3-220ENST00000613421 ARGLU1Q9NWB6 273 aaPredicted RBP16.31■□□□□ 0.2
GGA3-220ENST00000613421 MPHOSPH8Q99549 860 aa16.3■□□□□ 0.2
GGA3-220ENST00000613421 HYPKQ9NX55 129 aa16.3■□□□□ 0.2
GGA3-220ENST00000613421 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
GGA3-220ENST00000613421 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
GGA3-220ENST00000613421 FOXO3O43524 673 aa16.3■□□□□ 0.2
GGA3-220ENST00000613421 ZNF771Q7L3S4 317 aaPredicted RBP16.3■□□□□ 0.2
GGA3-220ENST00000613421 MRPL50Q8N5N7 158 aaKnown RBP16.3■□□□□ 0.2
GGA3-220ENST00000613421 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
GGA3-220ENST00000613421 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
GGA3-220ENST00000613421 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
GGA3-220ENST00000613421 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
GGA3-220ENST00000613421 RIMS2Q9UQ26 1411 aa16.29■□□□□ 0.2
GGA3-220ENST00000613421 MPNDQ8N594 471 aa16.29■□□□□ 0.2
GGA3-220ENST00000613421 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
GGA3-220ENST00000613421 PDE4CQ08493 712 aa16.29■□□□□ 0.2
GGA3-220ENST00000613421 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
GGA3-220ENST00000613421 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
GGA3-220ENST00000613421 CCDC69A6NI79 296 aa16.28■□□□□ 0.2
GGA3-220ENST00000613421 RLBP1P12271 317 aa16.28■□□□□ 0.2
GGA3-220ENST00000613421 TTC21AQ8NDW8 1320 aa16.28■□□□□ 0.2
GGA3-220ENST00000613421 CDKL5O76039 1030 aa16.28■□□□□ 0.2
GGA3-220ENST00000613421 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
GGA3-220ENST00000613421 A0A1W2PP64 1363 aa16.27■□□□□ 0.2
GGA3-220ENST00000613421 FERMT3Q86UX7 667 aa16.27■□□□□ 0.2
GGA3-220ENST00000613421 C8orf58Q8NAV2 365 aa16.27■□□□□ 0.2
GGA3-220ENST00000613421 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
GGA3-220ENST00000613421 DDX11Q96FC9 970 aa16.27■□□□□ 0.19
GGA3-220ENST00000613421 MEIS3Q99687 375 aa16.27■□□□□ 0.19
GGA3-220ENST00000613421 TCEAL9Q9UHQ7 104 aa16.27■□□□□ 0.19
GGA3-220ENST00000613421 ADGBQ8N7X0 1667 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
GGA3-220ENST00000613421 LIMCH1Q9UPQ0 1083 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
GGA3-220ENST00000613421 ZFYVE9O95405 1425 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 ZMYM4Q5VZL5 1548 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 PTCD1O75127 700 aaKnown RBP16.26■□□□□ 0.19
GGA3-220ENST00000613421 TEX35Q5T0J7 233 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 ABCC1P33527 1531 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 CCP110O43303 1012 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 TXLNAP40222 546 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 MAP3K11Q16584 847 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 ECHDC1Q9NTX5 307 aa16.26■□□□□ 0.19
GGA3-220ENST00000613421 STARD3NLO95772 234 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 ZSCAN30Q86W11 494 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 MAP3K2Q9Y2U5 619 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
GGA3-220ENST00000613421 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 SPINK5Q9NQ38 1064 aaPredicted RBP16.25■□□□□ 0.19
GGA3-220ENST00000613421 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 PI4KAP2A4QPH2 592 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
GGA3-220ENST00000613421 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 PI4KAP1Q8N8J0 262 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 TSHZ3Q63HK5 1081 aa16.25■□□□□ 0.19
GGA3-220ENST00000613421 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
GGA3-220ENST00000613421 EVI5LQ96CN4 794 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 SERPINC1P01008 464 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
GGA3-220ENST00000613421 CEP57L1Q8IYX8 460 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 IDH1O75874 414 aaKnown RBP16.24■□□□□ 0.19
GGA3-220ENST00000613421 SDSP20132 328 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 CCDC183Q5T5S1 534 aa16.24■□□□□ 0.19
GGA3-220ENST00000613421 TDO2P48775 406 aa16.23■□□□□ 0.19
GGA3-220ENST00000613421 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
GGA3-220ENST00000613421 NPATQ14207 1427 aa16.23■□□□□ 0.19
GGA3-220ENST00000613421 VAMP4O75379 141 aa16.23■□□□□ 0.19
GGA3-220ENST00000613421 BAG4O95429 457 aaKnown RBP16.23■□□□□ 0.19
GGA3-220ENST00000613421 SCAND2PQ9GZW5 306 aaPredicted RBP16.23■□□□□ 0.19
GGA3-220ENST00000613421 ATP7AQ04656 1500 aa16.22■□□□□ 0.19
GGA3-220ENST00000613421 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
GGA3-220ENST00000613421 DACH1Q9UI36 760 aa16.22■□□□□ 0.19
GGA3-220ENST00000613421 PIP4K2AP48426 406 aaPredicted RBP16.22■□□□□ 0.19
GGA3-220ENST00000613421 AIDAQ96BJ3 306 aa16.22■□□□□ 0.19
GGA3-220ENST00000613421 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms