RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 TTC21BQ7Z4L5 1316 aa24.52■■□□□ 1.52
SMAD6-205ENST00000612349 EXOC6BQ9Y2D4 811 aa24.52■■□□□ 1.52
SMAD6-205ENST00000612349 DMRT2Q9Y5R5 561 aa24.52■■□□□ 1.52
SMAD6-205ENST00000612349 NSD2O96028 1365 aa24.52■■□□□ 1.52
SMAD6-205ENST00000612349 SERPINC1P01008 464 aa24.52■■□□□ 1.52
SMAD6-205ENST00000612349 ZNF771Q7L3S4 317 aaPredicted RBP24.52■■□□□ 1.52
SMAD6-205ENST00000612349 HYPKQ9NX55 129 aa24.51■■□□□ 1.51
SMAD6-205ENST00000612349 SCAF11Q99590 1463 aaKnown RBP24.51■■□□□ 1.51
SMAD6-205ENST00000612349 MX1P20591 662 aa24.51■■□□□ 1.51
SMAD6-205ENST00000612349 CCDC85AQ96PX6 553 aaPredicted RBP24.51■■□□□ 1.51
SMAD6-205ENST00000612349 DBF4Q9UBU7 674 aaPredicted RBP24.51■■□□□ 1.51
SMAD6-205ENST00000612349 BRPF3Q9ULD4 1205 aa24.5■■□□□ 1.51
SMAD6-205ENST00000612349 PPFIBP1Q86W92 1011 aa24.5■■□□□ 1.51
SMAD6-205ENST00000612349 ZHX3Q9H4I2 956 aa24.5■■□□□ 1.51
SMAD6-205ENST00000612349 PDCL3Q9H2J4 239 aa24.49■■□□□ 1.51
SMAD6-205ENST00000612349 TEX13AQ9BXU3 409 aaPredicted RBP24.49■■□□□ 1.51
SMAD6-205ENST00000612349 IFIT5Q13325 482 aaKnown RBP24.49■■□□□ 1.51
SMAD6-205ENST00000612349 USHBP1Q8N6Y0 703 aa24.49■■□□□ 1.51
SMAD6-205ENST00000612349 SPATA32Q96LK8 384 aa24.49■■□□□ 1.51
SMAD6-205ENST00000612349 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
SMAD6-205ENST00000612349 SSH1Q8WYL5 1049 aa24.48■■□□□ 1.51
SMAD6-205ENST00000612349 MYD88Q99836 296 aa24.48■■□□□ 1.51
SMAD6-205ENST00000612349 TTLL5Q6EMB2 1281 aa24.48■■□□□ 1.51
SMAD6-205ENST00000612349 IL27Q8NEV9 243 aa24.48■■□□□ 1.51
SMAD6-205ENST00000612349 NUTM1Q86Y26 1132 aa24.48■■□□□ 1.51
SMAD6-205ENST00000612349 DNAAF4Q8WXU2 420 aa24.48■■□□□ 1.51
SMAD6-205ENST00000612349 RARSP54136 660 aaKnown RBP24.47■■□□□ 1.51
SMAD6-205ENST00000612349 CBFA2T2O43439 604 aa24.47■■□□□ 1.51
SMAD6-205ENST00000612349 EXOC5O00471 708 aa24.47■■□□□ 1.51
SMAD6-205ENST00000612349 CEP131Q9UPN4 1083 aa24.46■■□□□ 1.51
SMAD6-205ENST00000612349 CCDC196A0A1B0GTZ2 297 aa24.45■■□□□ 1.5
SMAD6-205ENST00000612349 MAP3K12Q12852 859 aa24.45■■□□□ 1.5
SMAD6-205ENST00000612349 CADPS2Q86UW7 1296 aa24.45■■□□□ 1.5
SMAD6-205ENST00000612349 ZNF76P36508 570 aa24.45■■□□□ 1.5
SMAD6-205ENST00000612349 CEP57L1Q8IYX8 460 aa24.45■■□□□ 1.5
SMAD6-205ENST00000612349 HMGN5P82970 282 aaKnown RBP24.44■■□□□ 1.5
SMAD6-205ENST00000612349 MPRIPQ6WCQ1 1025 aa24.44■■□□□ 1.5
SMAD6-205ENST00000612349 ATP10BO94823 1461 aa24.44■■□□□ 1.5
SMAD6-205ENST00000612349 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
SMAD6-205ENST00000612349 TRMT112Q9UI30 125 aaKnown RBP24.44■■□□□ 1.5
SMAD6-205ENST00000612349 PTPRCP08575 1304 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 PAF1Q8N7H5 531 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 PLCH2O75038 1416 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 USP5P45974 858 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 MTERF4Q7Z6M4 381 aaKnown RBP24.43■■□□□ 1.5
SMAD6-205ENST00000612349 DEF6Q9H4E7 631 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 KDM5BQ9UGL1 1544 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 TANGO6Q9C0B7 1094 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 IFNL2Q8IZJ0 200 aa24.43■■□□□ 1.5
SMAD6-205ENST00000612349 SLC5A1P13866 664 aa24.42■■□□□ 1.5
SMAD6-205ENST00000612349 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
SMAD6-205ENST00000612349 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
SMAD6-205ENST00000612349 SSBP05455 408 aaKnown RBP eCLIP24.42■■□□□ 1.5
SMAD6-205ENST00000612349 CASTP20810 708 aaKnown RBP24.42■■□□□ 1.5
SMAD6-205ENST00000612349 MAP7D2Q96T17 732 aa24.42■■□□□ 1.5
SMAD6-205ENST00000612349 NAPBQ9H115 298 aa24.42■■□□□ 1.5
SMAD6-205ENST00000612349 MPHOSPH10O00566 681 aaKnown RBP24.42■■□□□ 1.5
SMAD6-205ENST00000612349 POLR3DP05423 398 aaPredicted RBP24.41■■□□□ 1.5
SMAD6-205ENST00000612349 HMGB1P09429 215 aaKnown RBP24.41■■□□□ 1.5
SMAD6-205ENST00000612349 SLF2Q8IX21 1173 aa24.41■■□□□ 1.5
SMAD6-205ENST00000612349 ANKRD18BA2A2Z9 1011 aa24.41■■□□□ 1.5
SMAD6-205ENST00000612349 NKTRP30414 1462 aaKnown RBP24.41■■□□□ 1.5
SMAD6-205ENST00000612349 NUP62CLQ9H1M0 184 aa24.41■■□□□ 1.5
SMAD6-205ENST00000612349 MKNK2Q9HBH9 465 aa24.41■■□□□ 1.5
SMAD6-205ENST00000612349 SPINK5Q9NQ38 1064 aaPredicted RBP24.41■■□□□ 1.5
SMAD6-205ENST00000612349 CRACR2BQ8N4Y2 399 aaPredicted RBP24.4■■□□□ 1.5
SMAD6-205ENST00000612349 TNRQ92752 1358 aa24.4■■□□□ 1.5
SMAD6-205ENST00000612349 DZIP1Q86YF9 867 aaKnown RBP24.4■■□□□ 1.5
SMAD6-205ENST00000612349 BOLA2Q9H3K6 86 aa24.39■■□□□ 1.5
SMAD6-205ENST00000612349 ANKIB1Q9P2G1 1089 aa24.39■■□□□ 1.5
SMAD6-205ENST00000612349 ERLIN2O94905 339 aa24.39■■□□□ 1.5
SMAD6-205ENST00000612349 SEC63Q9UGP8 760 aaKnown RBP24.39■■□□□ 1.5
SMAD6-205ENST00000612349 PATL2C9JE40 543 aaKnown RBP24.39■■□□□ 1.49
SMAD6-205ENST00000612349 A0A087WZG4 1122 aa24.38■■□□□ 1.49
SMAD6-205ENST00000612349 RNF41Q9H4P4 317 aaPredicted RBP24.38■■□□□ 1.49
SMAD6-205ENST00000612349 ASXL2Q76L83 1435 aa24.38■■□□□ 1.49
SMAD6-205ENST00000612349 SH2B1Q9NRF2 756 aaPredicted RBP24.38■■□□□ 1.49
SMAD6-205ENST00000612349 SMTNL1A8MU46 457 aa24.37■■□□□ 1.49
SMAD6-205ENST00000612349 FLIIQ13045 1269 aa24.37■■□□□ 1.49
SMAD6-205ENST00000612349 CTCFLQ8NI51 663 aaPredicted RBP24.37■■□□□ 1.49
SMAD6-205ENST00000612349 ACEP12821 1306 aa24.37■■□□□ 1.49
SMAD6-205ENST00000612349 IQCA1Q86XH1 822 aa24.37■■□□□ 1.49
SMAD6-205ENST00000612349 MINDY4BA8MYZ0 360 aa24.36■■□□□ 1.49
SMAD6-205ENST00000612349 TNIP1Q15025 636 aa24.36■■□□□ 1.49
SMAD6-205ENST00000612349 NOM1Q5C9Z4 860 aaKnown RBP24.36■■□□□ 1.49
SMAD6-205ENST00000612349 RPGRQ92834 1020 aaKnown RBP24.36■■□□□ 1.49
SMAD6-205ENST00000612349 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
SMAD6-205ENST00000612349 PRPF40BQ6NWY9 871 aaKnown RBP24.36■■□□□ 1.49
SMAD6-205ENST00000612349 WDHD1O75717 1129 aaPredicted RBP24.35■■□□□ 1.49
SMAD6-205ENST00000612349 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
SMAD6-205ENST00000612349 SPC24Q8NBT2 197 aa24.35■■□□□ 1.49
SMAD6-205ENST00000612349 UPF3BQ9BZI7 483 aaKnown RBP24.35■■□□□ 1.49
SMAD6-205ENST00000612349 LRRFIP2Q9Y608 721 aaKnown RBP24.35■■□□□ 1.49
SMAD6-205ENST00000612349 ANKRD36BQ8N2N9 1353 aa24.34■■□□□ 1.49
SMAD6-205ENST00000612349 CDC5LQ99459 802 aaKnown RBP24.34■■□□□ 1.49
SMAD6-205ENST00000612349 DDX11Q96FC9 970 aa24.34■■□□□ 1.49
SMAD6-205ENST00000612349 PHAXQ9H814 394 aaKnown RBP24.33■■□□□ 1.49
SMAD6-205ENST00000612349 F6X3S4 739 aa24.33■■□□□ 1.49
SMAD6-205ENST00000612349 ZNF444Q8N0Y2 327 aaPredicted RBP24.33■■□□□ 1.49
SMAD6-205ENST00000612349 NUP153P49790 1475 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms