RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 DDIT3P35638 169 aa12.9□□□□□ -0.34
PABPC1-224ENST00000610907 AKAP4Q5JQC9 854 aa12.9□□□□□ -0.34
PABPC1-224ENST00000610907 NBPF6Q5VWK0 638 aa12.9□□□□□ -0.34
PABPC1-224ENST00000610907 NBPF4Q96M43 638 aa12.9□□□□□ -0.34
PABPC1-224ENST00000610907 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
PABPC1-224ENST00000610907 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.35
PABPC1-224ENST00000610907 C16orf71Q8IYS4 520 aaPredicted RBP12.9□□□□□ -0.35
PABPC1-224ENST00000610907 MST1RQ04912 1400 aa12.89□□□□□ -0.35
PABPC1-224ENST00000610907 GCP02774 474 aa12.89□□□□□ -0.35
PABPC1-224ENST00000610907 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
PABPC1-224ENST00000610907 MCM4P33991 863 aa12.89□□□□□ -0.35
PABPC1-224ENST00000610907 RABEP1Q15276 862 aa12.89□□□□□ -0.35
PABPC1-224ENST00000610907 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
PABPC1-224ENST00000610907 LMO7Q8WWI1 1683 aa12.88□□□□□ -0.35
PABPC1-224ENST00000610907 SDSP20132 328 aa12.88□□□□□ -0.35
PABPC1-224ENST00000610907 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
PABPC1-224ENST00000610907 USP26Q9BXU7 913 aa12.88□□□□□ -0.35
PABPC1-224ENST00000610907 LMTK3Q96Q04 1460 aa12.88□□□□□ -0.35
PABPC1-224ENST00000610907 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-224ENST00000610907 REC8O95072 547 aa12.87□□□□□ -0.35
PABPC1-224ENST00000610907 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
PABPC1-224ENST00000610907 LRRCC1Q9C099 1032 aa12.87□□□□□ -0.35
PABPC1-224ENST00000610907 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
PABPC1-224ENST00000610907 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
PABPC1-224ENST00000610907 PTMSP20962 102 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 PDE1AP54750 535 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 TEFQ10587 303 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-224ENST00000610907 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 SMARCA5O60264 1052 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-224ENST00000610907 RAB11FIP3O75154 756 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-224ENST00000610907 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-224ENST00000610907 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-224ENST00000610907 USP44Q9H0E7 712 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 C19orf44Q9H6X5 657 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 STAP2Q9UGK3 403 aa12.86□□□□□ -0.35
PABPC1-224ENST00000610907 AOX1Q06278 1338 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 SALL3Q9BXA9 1300 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 ERC2O15083 957 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-224ENST00000610907 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 ORAI2Q96SN7 254 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 LGR6Q9HBX8 967 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
PABPC1-224ENST00000610907 CAMTA1Q9Y6Y1 1673 aa12.84□□□□□ -0.35
PABPC1-224ENST00000610907 TRPM3Q9HCF6 1732 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-224ENST00000610907 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
PABPC1-224ENST00000610907 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
PABPC1-224ENST00000610907 KRT28Q7Z3Y7 464 aa12.84□□□□□ -0.35
PABPC1-224ENST00000610907 RBM33Q96EV2 1170 aaKnown RBP12.84□□□□□ -0.35
PABPC1-224ENST00000610907 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
PABPC1-224ENST00000610907 APBB1O00213 710 aa12.83□□□□□ -0.36
PABPC1-224ENST00000610907 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.36
PABPC1-224ENST00000610907 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.36
PABPC1-224ENST00000610907 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
PABPC1-224ENST00000610907 ANKRD24Q8TF21 1146 aa12.83□□□□□ -0.36
PABPC1-224ENST00000610907 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
PABPC1-224ENST00000610907 LRRFIP2Q9Y608 721 aaKnown RBP12.83□□□□□ -0.36
PABPC1-224ENST00000610907 C1orf167Q5SNV9 1468 aa12.83□□□□□ -0.36
PABPC1-224ENST00000610907 PNMA6EA0A0J9YXQ4 647 aa12.82□□□□□ -0.36
PABPC1-224ENST00000610907 MX1P20591 662 aa12.82□□□□□ -0.36
PABPC1-224ENST00000610907 RAB3GAP1Q15042 981 aa12.82□□□□□ -0.36
PABPC1-224ENST00000610907 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
PABPC1-224ENST00000610907 PHAXQ9H814 394 aaKnown RBP12.82□□□□□ -0.36
PABPC1-224ENST00000610907 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-224ENST00000610907 EXOC6BQ9Y2D4 811 aa12.82□□□□□ -0.36
PABPC1-224ENST00000610907 HEG1Q9ULI3 1381 aa12.82□□□□□ -0.36
PABPC1-224ENST00000610907 POLA2Q14181 598 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 HSP90AB4PQ58FF6 505 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 CLEC17AQ6ZS10 378 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 DNAAF4Q8WXU2 420 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 LRRC59Q96AG4 307 aaKnown RBP12.81□□□□□ -0.36
PABPC1-224ENST00000610907 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 ST18O60284 1047 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 EIF2S2P20042 333 aaKnown RBP12.81□□□□□ -0.36
PABPC1-224ENST00000610907 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
PABPC1-224ENST00000610907 BEND3Q5T5X7 828 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 DCCP43146 1447 aa12.81□□□□□ -0.36
PABPC1-224ENST00000610907 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
PABPC1-224ENST00000610907 TRAK2O60296 914 aa12.8□□□□□ -0.36
PABPC1-224ENST00000610907 ALDH1L1O75891 902 aa12.8□□□□□ -0.36
PABPC1-224ENST00000610907 CD2BP2O95400 341 aaKnown RBP12.8□□□□□ -0.36
PABPC1-224ENST00000610907 MPRIPQ6WCQ1 1025 aa12.8□□□□□ -0.36
PABPC1-224ENST00000610907 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
PABPC1-224ENST00000610907 CWC22Q9HCG8 908 aaKnown RBP12.8□□□□□ -0.36
PABPC1-224ENST00000610907 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
PABPC1-224ENST00000610907 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
PABPC1-224ENST00000610907 ABCC6O95255 1503 aa12.79□□□□□ -0.36
PABPC1-224ENST00000610907 TNPO1Q92973 898 aaKnown RBP12.79□□□□□ -0.36
PABPC1-224ENST00000610907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.366e-20■□□□□ 10.8
PABPC1-224ENST00000610907 ISY1Q9ULR0 285 aaKnown RBP12.79□□□□□ -0.36
PABPC1-224ENST00000610907 PI4KAP2A4QPH2 592 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-224ENST00000610907 MCCP23508 829 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 MCM2P49736 904 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms