RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 RXRBP28702 533 aa8.71□□□□□ -1.02
CDC40-207ENST00000606893 CENPQQ7L2Z9 268 aaPredicted RBP8.71□□□□□ -1.02
CDC40-207ENST00000606893 TSPYL6Q8N831 410 aa8.71□□□□□ -1.02
CDC40-207ENST00000606893 GJD4Q96KN9 370 aaPredicted RBP8.71□□□□□ -1.02
CDC40-207ENST00000606893 RRAGDQ9NQL2 400 aaPredicted RBP8.71□□□□□ -1.02
CDC40-207ENST00000606893 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.02
CDC40-207ENST00000606893 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.02
CDC40-207ENST00000606893 WDR17Q8IZU2 1322 aa8.71□□□□□ -1.02
CDC40-207ENST00000606893 PXDNQ92626 1479 aa8.71□□□□□ -1.02
CDC40-207ENST00000606893 PHF14O94880 888 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 KLHL34Q8N239 644 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 IL17REQ8NFR9 667 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 ANKRD45Q5TZF3 282 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 JARID2Q92833 1246 aaPredicted RBP8.7□□□□□ -1.02
CDC40-207ENST00000606893 ASAP1Q9ULH1 1129 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 AATKQ6ZMQ8 1374 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 GNAT3A8MTJ3 354 aa8.7□□□□□ -1.02
CDC40-207ENST00000606893 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 NFE2L2Q16236 605 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 DEFB132Q7Z7B7 95 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 DDRGK1Q96HY6 314 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 SPG7Q9UQ90 795 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 PHLPP1O60346 1717 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 DCCP43146 1447 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 SSH2Q76I76 1423 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 TSHZ3Q63HK5 1081 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 WDR63Q8IWG1 891 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 CHAMP1Q96JM3 812 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 TRPC5Q9UL62 973 aaPredicted RBP8.69□□□□□ -1.02
CDC40-207ENST00000606893 NOB1Q9ULX3 412 aaKnown RBP8.69□□□□□ -1.02
CDC40-207ENST00000606893 ITSN1Q15811 1721 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 NWD1Q149M9 1564 aa8.69□□□□□ -1.02
CDC40-207ENST00000606893 CAMTA1Q9Y6Y1 1673 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 TTC5Q8N0Z6 440 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 MARCH10Q8NA82 808 aaPredicted RBP8.68□□□□□ -1.02
CDC40-207ENST00000606893 USP19O94966 1318 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 INSRP06213 1382 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 GNAI1P63096 354 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 PPP1R1BQ9UD71 204 aaPredicted RBP8.68□□□□□ -1.02
CDC40-207ENST00000606893 RGS17Q9UGC6 210 aaPredicted RBP8.68□□□□□ -1.02
CDC40-207ENST00000606893 TRIM35Q9UPQ4 493 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 PIK3C2AO00443 1686 aa8.68□□□□□ -1.02
CDC40-207ENST00000606893 BICDL1Q6ZP65 573 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 SSH1Q8WYL5 1049 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 TMOD3Q9NYL9 352 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 MED1Q15648 1581 aaPredicted RBP8.67□□□□□ -1.02
CDC40-207ENST00000606893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.67□□□□□ -1.02
CDC40-207ENST00000606893 LRP6O75581 1613 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 KNDC1Q76NI1 1749 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 IFNL2Q8IZJ0 200 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 C8orf58Q8NAV2 365 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 PLEKHF1Q96S99 279 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 CARD10Q9BWT7 1032 aa8.67□□□□□ -1.02
CDC40-207ENST00000606893 RRP9O43818 475 aaKnown RBP8.66□□□□□ -1.02
CDC40-207ENST00000606893 TMEM57Q8N5G2 664 aa8.66□□□□□ -1.02
CDC40-207ENST00000606893 MBIPQ9NS73 344 aa8.66□□□□□ -1.02
CDC40-207ENST00000606893 APBA3O96018 575 aa8.66□□□□□ -1.02
CDC40-207ENST00000606893 RARSP54136 660 aaKnown RBP8.66□□□□□ -1.02
CDC40-207ENST00000606893 PANK2Q9BZ23 570 aa8.66□□□□□ -1.02
CDC40-207ENST00000606893 USP31Q70CQ4 1352 aa8.66□□□□□ -1.02
CDC40-207ENST00000606893 SPATA31A1Q5TZJ5 1347 aa8.66□□□□□ -1.02
CDC40-207ENST00000606893 IGSF1Q8N6C5 1336 aa8.66□□□□□ -1.02
CDC40-207ENST00000606893 PHKG2P15735 406 aa8.65□□□□□ -1.02
CDC40-207ENST00000606893 F6X3S4 739 aa8.65□□□□□ -1.02
CDC40-207ENST00000606893 NPHP1O15259 732 aa8.65□□□□□ -1.02
CDC40-207ENST00000606893 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
CDC40-207ENST00000606893 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
CDC40-207ENST00000606893 DZIP1LQ8IYY4 767 aaKnown RBP8.65□□□□□ -1.02
CDC40-207ENST00000606893 CCDC85AQ96PX6 553 aaPredicted RBP8.65□□□□□ -1.02
CDC40-207ENST00000606893 LARP6Q9BRS8 491 aaKnown RBP8.65□□□□□ -1.02
CDC40-207ENST00000606893 A1BGP04217 495 aa8.65□□□□□ -1.03
CDC40-207ENST00000606893 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.03
CDC40-207ENST00000606893 EN1Q05925 392 aaPredicted RBP8.65□□□□□ -1.03
CDC40-207ENST00000606893 SPATA31A6Q5VVP1 1343 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 PIGBQ92521 554 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 ZNF496Q96IT1 587 aaPredicted RBP8.64□□□□□ -1.03
CDC40-207ENST00000606893 RNF123Q5XPI4 1314 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 RGPD5Q99666 1765 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 IPO8O15397 1037 aaKnown RBP8.64□□□□□ -1.03
CDC40-207ENST00000606893 RNMTO43148 476 aaKnown RBP8.64□□□□□ -1.03
CDC40-207ENST00000606893 MS4A1P11836 297 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 PAXIP1Q6ZW49 1069 aaPredicted RBP8.64□□□□□ -1.03
CDC40-207ENST00000606893 USP16Q9Y5T5 823 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 SPATA31A5Q5VU36 1347 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 SPATA31A7Q8IWB4 1347 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 C16orf71Q8IYS4 520 aaPredicted RBP8.64□□□□□ -1.03
CDC40-207ENST00000606893 MEGF6O75095 1541 aa8.64□□□□□ -1.03
CDC40-207ENST00000606893 TRIM27P14373 513 aa8.63□□□□□ -1.03
CDC40-207ENST00000606893 BECN1Q14457 450 aa8.63□□□□□ -1.03
CDC40-207ENST00000606893 ZKSCAN2Q63HK3 967 aa8.63□□□□□ -1.03
CDC40-207ENST00000606893 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
CDC40-207ENST00000606893 CHMP4AQ9BY43 222 aa8.63□□□□□ -1.03
CDC40-207ENST00000606893 CHMP4BQ9H444 224 aaKnown RBP8.63□□□□□ -1.03
CDC40-207ENST00000606893 TBC1D2BQ9UPU7 963 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms