RNA–Protein interactions for RNA: ENST00000606538.5

POLR2F-213, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2 BASIC

Gene POLR2F, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-213ENST00000606538 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
POLR2F-213ENST00000606538 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
POLR2F-213ENST00000606538 RNMTO43148 476 aaKnown RBP17.48■□□□□ 0.39
POLR2F-213ENST00000606538 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
POLR2F-213ENST00000606538 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
POLR2F-213ENST00000606538 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
POLR2F-213ENST00000606538 MRC1P22897 1456 aa17.48■□□□□ 0.39
POLR2F-213ENST00000606538 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
POLR2F-213ENST00000606538 NEFMP07197 916 aa17.47■□□□□ 0.39
POLR2F-213ENST00000606538 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
POLR2F-213ENST00000606538 PIGBQ92521 554 aa17.46■□□□□ 0.39
POLR2F-213ENST00000606538 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
POLR2F-213ENST00000606538 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.39
POLR2F-213ENST00000606538 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
POLR2F-213ENST00000606538 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
POLR2F-213ENST00000606538 APAF1O14727 1248 aa17.45■□□□□ 0.38
POLR2F-213ENST00000606538 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
POLR2F-213ENST00000606538 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
POLR2F-213ENST00000606538 MCM10Q7L590 875 aa17.45■□□□□ 0.38
POLR2F-213ENST00000606538 LY75O60449 1722 aa17.44■□□□□ 0.38
POLR2F-213ENST00000606538 APBA3O96018 575 aa17.44■□□□□ 0.38
POLR2F-213ENST00000606538 RIPK4P57078 832 aa17.44■□□□□ 0.38
POLR2F-213ENST00000606538 NFATC2IPQ8NCF5 419 aa17.44■□□□□ 0.38
POLR2F-213ENST00000606538 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
POLR2F-213ENST00000606538 PAPPAQ13219 1627 aa17.43■□□□□ 0.38
POLR2F-213ENST00000606538 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
POLR2F-213ENST00000606538 SLC52A2Q9HAB3 445 aa17.43■□□□□ 0.38
POLR2F-213ENST00000606538 TMOD3Q9NYL9 352 aa17.43■□□□□ 0.38
POLR2F-213ENST00000606538 PLSCR1O15162 318 aa17.42■□□□□ 0.38
POLR2F-213ENST00000606538 CABP4P57796 275 aa17.42■□□□□ 0.38
POLR2F-213ENST00000606538 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
POLR2F-213ENST00000606538 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
POLR2F-213ENST00000606538 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
POLR2F-213ENST00000606538 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
POLR2F-213ENST00000606538 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
POLR2F-213ENST00000606538 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
POLR2F-213ENST00000606538 RREB1Q92766 1687 aa17.41■□□□□ 0.38
POLR2F-213ENST00000606538 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
POLR2F-213ENST00000606538 PROM2Q8N271 834 aa17.4■□□□□ 0.38
POLR2F-213ENST00000606538 ATG3Q9NT62 314 aa17.4■□□□□ 0.38
POLR2F-213ENST00000606538 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
POLR2F-213ENST00000606538 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
POLR2F-213ENST00000606538 BAG6P46379 1132 aa17.39■□□□□ 0.37
POLR2F-213ENST00000606538 POLA2Q14181 598 aa17.39■□□□□ 0.37
POLR2F-213ENST00000606538 EZH2Q15910 746 aaKnown RBP17.39■□□□□ 0.37
POLR2F-213ENST00000606538 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.37
POLR2F-213ENST00000606538 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
POLR2F-213ENST00000606538 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
POLR2F-213ENST00000606538 TEFQ10587 303 aa17.37■□□□□ 0.37
POLR2F-213ENST00000606538 NUP188Q5SRE5 1749 aa17.37■□□□□ 0.37
POLR2F-213ENST00000606538 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
POLR2F-213ENST00000606538 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
POLR2F-213ENST00000606538 TAF1LQ8IZX4 1826 aa17.36■□□□□ 0.37
POLR2F-213ENST00000606538 SLC39A6Q13433 755 aa17.36■□□□□ 0.37
POLR2F-213ENST00000606538 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
POLR2F-213ENST00000606538 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
POLR2F-213ENST00000606538 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
POLR2F-213ENST00000606538 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
POLR2F-213ENST00000606538 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
POLR2F-213ENST00000606538 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
POLR2F-213ENST00000606538 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
POLR2F-213ENST00000606538 KCNQ3O43525 872 aa17.34■□□□□ 0.37
POLR2F-213ENST00000606538 SLC4A9Q96Q91 983 aa17.34■□□□□ 0.37
POLR2F-213ENST00000606538 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
POLR2F-213ENST00000606538 KCNQ4P56696 695 aa17.33■□□□□ 0.36
POLR2F-213ENST00000606538 WWC1Q8IX03 1113 aa17.33■□□□□ 0.36
POLR2F-213ENST00000606538 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
POLR2F-213ENST00000606538 TJP1Q07157 1748 aa17.33■□□□□ 0.36
POLR2F-213ENST00000606538 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
POLR2F-213ENST00000606538 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
POLR2F-213ENST00000606538 C5P01031 1676 aa17.32■□□□□ 0.36
POLR2F-213ENST00000606538 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
POLR2F-213ENST00000606538 LOC102724428A0A0B4J2F2 783 aa17.31■□□□□ 0.36
POLR2F-213ENST00000606538 SIK1P57059 783 aa17.31■□□□□ 0.36
POLR2F-213ENST00000606538 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
POLR2F-213ENST00000606538 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
POLR2F-213ENST00000606538 PTCD1O75127 700 aaKnown RBP17.3■□□□□ 0.36
POLR2F-213ENST00000606538 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
POLR2F-213ENST00000606538 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
POLR2F-213ENST00000606538 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
POLR2F-213ENST00000606538 CHL1O00533 1208 aa17.29■□□□□ 0.36
POLR2F-213ENST00000606538 ITPK1Q13572 414 aa17.29■□□□□ 0.36
POLR2F-213ENST00000606538 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
POLR2F-213ENST00000606538 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
POLR2F-213ENST00000606538 RBM42Q9BTD8 480 aaKnown RBP17.29■□□□□ 0.36
POLR2F-213ENST00000606538 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
POLR2F-213ENST00000606538 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
POLR2F-213ENST00000606538 CFAP44Q96MT7 982 aa17.27■□□□□ 0.36
POLR2F-213ENST00000606538 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
POLR2F-213ENST00000606538 C4BP0C0L5 1744 aa17.27■□□□□ 0.35
POLR2F-213ENST00000606538 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.35
POLR2F-213ENST00000606538 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
POLR2F-213ENST00000606538 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
POLR2F-213ENST00000606538 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
POLR2F-213ENST00000606538 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
POLR2F-213ENST00000606538 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
POLR2F-213ENST00000606538 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
POLR2F-213ENST00000606538 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
POLR2F-213ENST00000606538 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
POLR2F-213ENST00000606538 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms