RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 TMOD3Q9NYL9 352 aa15.64■□□□□ 0.09
FARP1-230ENST00000600380 HTATSF1O43719 755 aaKnown RBP15.63■□□□□ 0.09
FARP1-230ENST00000600380 NEFMP07197 916 aa15.63■□□□□ 0.09
FARP1-230ENST00000600380 KCNQ4P56696 695 aa15.63■□□□□ 0.09
FARP1-230ENST00000600380 EZH2Q15910 746 aaKnown RBP15.63■□□□□ 0.09
FARP1-230ENST00000600380 MRC1P22897 1456 aa15.63■□□□□ 0.09
FARP1-230ENST00000600380 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
FARP1-230ENST00000600380 PLSCR1O15162 318 aa15.61■□□□□ 0.09
FARP1-230ENST00000600380 KCNQ3O43525 872 aa15.61■□□□□ 0.09
FARP1-230ENST00000600380 SF3B2Q13435 895 aaKnown RBP15.61■□□□□ 0.09
FARP1-230ENST00000600380 RTF1Q92541 710 aaKnown RBP15.61■□□□□ 0.09
FARP1-230ENST00000600380 MIS18AQ9NYP9 233 aa15.61■□□□□ 0.09
FARP1-230ENST00000600380 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
FARP1-230ENST00000600380 BAG6P46379 1132 aa15.6■□□□□ 0.09
FARP1-230ENST00000600380 SLC4A9Q96Q91 983 aa15.6■□□□□ 0.09
FARP1-230ENST00000600380 LRRC4BQ9NT99 713 aa15.6■□□□□ 0.09
FARP1-230ENST00000600380 SALL2Q9Y467 1007 aaPredicted RBP15.6■□□□□ 0.09
FARP1-230ENST00000600380 TXNRD1Q16881 649 aa15.59■□□□□ 0.09
FARP1-230ENST00000600380 PALLDQ8WX93 1383 aa15.59■□□□□ 0.09
FARP1-230ENST00000600380 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
FARP1-230ENST00000600380 TEFQ10587 303 aa15.58■□□□□ 0.08
FARP1-230ENST00000600380 PTCD1O75127 700 aaKnown RBP15.56■□□□□ 0.08
FARP1-230ENST00000600380 ITPK1Q13572 414 aa15.56■□□□□ 0.08
FARP1-230ENST00000600380 TAF7Q15545 349 aaPredicted RBP15.56■□□□□ 0.08
FARP1-230ENST00000600380 LOC102724428A0A0B4J2F2 783 aa15.55■□□□□ 0.08
FARP1-230ENST00000600380 BTBD11A6QL63 1104 aa15.55■□□□□ 0.08
FARP1-230ENST00000600380 SIK1P57059 783 aa15.55■□□□□ 0.08
FARP1-230ENST00000600380 WWC1Q8IX03 1113 aa15.55■□□□□ 0.08
FARP1-230ENST00000600380 SMARCC1Q92922 1105 aaPredicted RBP15.55■□□□□ 0.08
FARP1-230ENST00000600380 KCPQ6ZWJ8 1503 aa15.54■□□□□ 0.08
FARP1-230ENST00000600380 LMOD3Q0VAK6 560 aa15.54■□□□□ 0.08
FARP1-230ENST00000600380 ZNF790Q6PG37 636 aa15.54■□□□□ 0.08
FARP1-230ENST00000600380 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
FARP1-230ENST00000600380 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
FARP1-230ENST00000600380 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
FARP1-230ENST00000600380 CCNL1Q9UK58 526 aaPredicted RBP15.54■□□□□ 0.08
FARP1-230ENST00000600380 LY75O60449 1722 aa15.54■□□□□ 0.08
FARP1-230ENST00000600380 PAPPAQ13219 1627 aa15.54■□□□□ 0.08
FARP1-230ENST00000600380 ZNF853P0CG23 659 aa15.53■□□□□ 0.08
FARP1-230ENST00000600380 CCDC27Q2M243 656 aa15.53■□□□□ 0.08
FARP1-230ENST00000600380 RGPD3A6NKT7 1758 aaPredicted RBP15.52■□□□□ 0.08
FARP1-230ENST00000600380 RGPD4Q7Z3J3 1758 aa15.52■□□□□ 0.08
FARP1-230ENST00000600380 RREB1Q92766 1687 aa15.52■□□□□ 0.08
FARP1-230ENST00000600380 PRAMEF22A3QJZ6 481 aa15.52■□□□□ 0.08
FARP1-230ENST00000600380 CHL1O00533 1208 aa15.52■□□□□ 0.08
FARP1-230ENST00000600380 LINC00116Q8NCU8 138 aa15.52■□□□□ 0.08
FARP1-230ENST00000600380 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
FARP1-230ENST00000600380 ZNF521Q96K83 1311 aa15.51■□□□□ 0.07
FARP1-230ENST00000600380 ZNF827Q17R98 1081 aa15.51■□□□□ 0.07
FARP1-230ENST00000600380 SLC27A3Q5K4L6 730 aa15.51■□□□□ 0.07
FARP1-230ENST00000600380 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
FARP1-230ENST00000600380 DNAJC10Q8IXB1 793 aa15.51■□□□□ 0.07
FARP1-230ENST00000600380 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
FARP1-230ENST00000600380 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
FARP1-230ENST00000600380 ATP6V1AP38606 617 aa15.5■□□□□ 0.07
FARP1-230ENST00000600380 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
FARP1-230ENST00000600380 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
FARP1-230ENST00000600380 AMIGO3Q86WK7 504 aa15.5■□□□□ 0.07
FARP1-230ENST00000600380 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
FARP1-230ENST00000600380 EIF4A1P60842 406 aaKnown RBP15.49■□□□□ 0.07
FARP1-230ENST00000600380 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
FARP1-230ENST00000600380 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
FARP1-230ENST00000600380 TSPYL4Q9UJ04 414 aa15.49■□□□□ 0.07
FARP1-230ENST00000600380 TTC5Q8N0Z6 440 aa15.48■□□□□ 0.07
FARP1-230ENST00000600380 CFAP44Q96MT7 982 aa15.48■□□□□ 0.07
FARP1-230ENST00000600380 KDM3BQ7LBC6 1761 aa15.48■□□□□ 0.07
FARP1-230ENST00000600380 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
FARP1-230ENST00000600380 TJP1Q07157 1748 aa15.47■□□□□ 0.07
FARP1-230ENST00000600380 TSR2Q969E8 191 aaKnown RBP15.47■□□□□ 0.07
FARP1-230ENST00000600380 FMNL2Q96PY5 1086 aa15.47■□□□□ 0.07
FARP1-230ENST00000600380 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
FARP1-230ENST00000600380 CYP19A1P11511 503 aaPredicted RBP15.46■□□□□ 0.07
FARP1-230ENST00000600380 INTS5Q6P9B9 1019 aaKnown RBP15.46■□□□□ 0.07
FARP1-230ENST00000600380 WDR63Q8IWG1 891 aa15.46■□□□□ 0.07
FARP1-230ENST00000600380 PDGFDQ9GZP0 370 aaPredicted RBP15.46■□□□□ 0.07
FARP1-230ENST00000600380 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
FARP1-230ENST00000600380 USP16Q9Y5T5 823 aa15.46■□□□□ 0.07
FARP1-230ENST00000600380 TAF1LQ8IZX4 1826 aa15.45■□□□□ 0.06
FARP1-230ENST00000600380 PSDA5PKW4 1024 aaPredicted RBP15.45■□□□□ 0.06
FARP1-230ENST00000600380 GIGYF1O75420 1035 aaPredicted RBP15.45■□□□□ 0.06
FARP1-230ENST00000600380 VSIG10Q8N0Z9 540 aa15.45■□□□□ 0.06
FARP1-230ENST00000600380 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
FARP1-230ENST00000600380 MYH14Q7Z406 1995 aaKnown RBP15.45■□□□□ 0.06
FARP1-230ENST00000600380 IL16Q14005 1332 aa15.44■□□□□ 0.06
FARP1-230ENST00000600380 CRKLP46109 303 aaKnown RBP15.44■□□□□ 0.06
FARP1-230ENST00000600380 GNAI1P63096 354 aa15.44■□□□□ 0.06
FARP1-230ENST00000600380 HNRNPUQ00839 825 aaKnown RBP eCLIP15.44■□□□□ 0.06
FARP1-230ENST00000600380 R3HDM1Q15032 1099 aaKnown RBP15.44■□□□□ 0.06
FARP1-230ENST00000600380 SLC15A2Q16348 729 aa15.44■□□□□ 0.06
FARP1-230ENST00000600380 NGEFQ8N5V2 710 aa15.44■□□□□ 0.06
FARP1-230ENST00000600380 C5P01031 1676 aa15.44■□□□□ 0.06
FARP1-230ENST00000600380 ZNF831Q5JPB2 1677 aa15.44■□□□□ 0.06
FARP1-230ENST00000600380 A1BGP04217 495 aa15.43■□□□□ 0.06
FARP1-230ENST00000600380 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
FARP1-230ENST00000600380 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
FARP1-230ENST00000600380 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
FARP1-230ENST00000600380 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
FARP1-230ENST00000600380 C4BP0C0L5 1744 aa15.43■□□□□ 0.06
FARP1-230ENST00000600380 TSPYL6Q8N831 410 aa15.42■□□□□ 0.06
FARP1-230ENST00000600380 STK32BQ9NY57 414 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms