RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 PALLDQ8WX93 1383 aa26.5■■□□□ 1.83
IRF3-221ENST00000598808 DLG5Q8TDM6 1919 aa26.5■■□□□ 1.83
IRF3-221ENST00000598808 SLC52A2Q9HAB3 445 aa26.49■■□□□ 1.83
IRF3-221ENST00000598808 DCTN1Q14203 1278 aa26.49■■□□□ 1.83
IRF3-221ENST00000598808 TXNRD1Q16881 649 aa26.49■■□□□ 1.83
IRF3-221ENST00000598808 SMARCC1Q92922 1105 aaPredicted RBP26.49■■□□□ 1.83
IRF3-221ENST00000598808 RIPK4P57078 832 aa26.48■■□□□ 1.83
IRF3-221ENST00000598808 IL17REQ8NFR9 667 aa26.48■■□□□ 1.83
IRF3-221ENST00000598808 ASAP1Q9ULH1 1129 aa26.48■■□□□ 1.83
IRF3-221ENST00000598808 MRC1P22897 1456 aa26.47■■□□□ 1.83
IRF3-221ENST00000598808 ADAMTS7Q9UKP4 1686 aa26.46■■□□□ 1.83
IRF3-221ENST00000598808 TMPOP42166 694 aaKnown RBP26.46■■□□□ 1.83
IRF3-221ENST00000598808 CCNL1Q9UK58 526 aaPredicted RBP26.46■■□□□ 1.83
IRF3-221ENST00000598808 SENP3-EIF4A1A0A087X0R7 540 aa26.45■■□□□ 1.82
IRF3-221ENST00000598808 PSDA5PKW4 1024 aaPredicted RBP26.45■■□□□ 1.82
IRF3-221ENST00000598808 KCNQ4P56696 695 aa26.45■■□□□ 1.82
IRF3-221ENST00000598808 ATG3Q9NT62 314 aa26.44■■□□□ 1.82
IRF3-221ENST00000598808 LY75O60449 1722 aa26.44■■□□□ 1.82
IRF3-221ENST00000598808 HTATSF1O43719 755 aaKnown RBP26.43■■□□□ 1.82
IRF3-221ENST00000598808 RBM42Q9BTD8 480 aaKnown RBP26.43■■□□□ 1.82
IRF3-221ENST00000598808 APAF1O14727 1248 aa26.42■■□□□ 1.82
IRF3-221ENST00000598808 LMOD3Q0VAK6 560 aa26.42■■□□□ 1.82
IRF3-221ENST00000598808 THUMPD2Q9BTF0 503 aaKnown RBP26.42■■□□□ 1.82
IRF3-221ENST00000598808 PROM2Q8N271 834 aa26.42■■□□□ 1.82
IRF3-221ENST00000598808 CEMIPQ8WUJ3 1361 aa26.41■■□□□ 1.82
IRF3-221ENST00000598808 SLC39A6Q13433 755 aa26.41■■□□□ 1.82
IRF3-221ENST00000598808 R3HDM1Q15032 1099 aaKnown RBP26.41■■□□□ 1.82
IRF3-221ENST00000598808 SLC27A3Q5K4L6 730 aa26.41■■□□□ 1.82
IRF3-221ENST00000598808 NBPF14Q5TI25 921 aa26.41■■□□□ 1.82
IRF3-221ENST00000598808 PTCD1O75127 700 aaKnown RBP26.4■■□□□ 1.82
IRF3-221ENST00000598808 TTC5Q8N0Z6 440 aa26.4■■□□□ 1.82
IRF3-221ENST00000598808 LOC102724428A0A0B4J2F2 783 aa26.38■■□□□ 1.81
IRF3-221ENST00000598808 BTBD11A6QL63 1104 aa26.38■■□□□ 1.81
IRF3-221ENST00000598808 SIK1P57059 783 aa26.38■■□□□ 1.81
IRF3-221ENST00000598808 LRRC4BQ9NT99 713 aa26.38■■□□□ 1.81
IRF3-221ENST00000598808 SIPA1L3O60292 1781 aaPredicted RBP26.38■■□□□ 1.81
IRF3-221ENST00000598808 ATP6V1AP38606 617 aa26.37■■□□□ 1.81
IRF3-221ENST00000598808 PAPPAQ13219 1627 aa26.36■■□□□ 1.81
IRF3-221ENST00000598808 STK32BQ9NY57 414 aa26.36■■□□□ 1.81
IRF3-221ENST00000598808 C5P01031 1676 aa26.35■■□□□ 1.81
IRF3-221ENST00000598808 LRP5O75197 1615 aa26.34■■□□□ 1.81
IRF3-221ENST00000598808 ANO8Q9HCE9 1232 aaPredicted RBP26.34■■□□□ 1.81
IRF3-221ENST00000598808 SALL2Q9Y467 1007 aaPredicted RBP26.34■■□□□ 1.81
IRF3-221ENST00000598808 TAF7Q15545 349 aaPredicted RBP26.32■■□□□ 1.8
IRF3-221ENST00000598808 MIS18AQ9NYP9 233 aa26.32■■□□□ 1.8
IRF3-221ENST00000598808 LAS1LQ9Y4W2 734 aaKnown RBP26.32■■□□□ 1.8
IRF3-221ENST00000598808 ZNF790Q6PG37 636 aa26.31■■□□□ 1.8
IRF3-221ENST00000598808 YTHDC1Q96MU7 727 aaKnown RBP26.31■■□□□ 1.8
IRF3-221ENST00000598808 TRIM35Q9UPQ4 493 aa26.31■■□□□ 1.8
IRF3-221ENST00000598808 KCPQ6ZWJ8 1503 aa26.3■■□□□ 1.8
IRF3-221ENST00000598808 ITPK1Q13572 414 aa26.3■■□□□ 1.8
IRF3-221ENST00000598808 KCNQ3O43525 872 aa26.29■■□□□ 1.8
IRF3-221ENST00000598808 TAF1LQ8IZX4 1826 aa26.28■■□□□ 1.8
IRF3-221ENST00000598808 ZNF827Q17R98 1081 aa26.28■■□□□ 1.8
IRF3-221ENST00000598808 LINC00116Q8NCU8 138 aa26.28■■□□□ 1.8
IRF3-221ENST00000598808 AK7Q96M32 723 aa26.28■■□□□ 1.8
IRF3-221ENST00000598808 SLC4A9Q96Q91 983 aa26.28■■□□□ 1.8
IRF3-221ENST00000598808 TSPYL4Q9UJ04 414 aa26.28■■□□□ 1.8
IRF3-221ENST00000598808 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
IRF3-221ENST00000598808 HMGB2P26583 209 aaKnown RBP26.27■■□□□ 1.8
IRF3-221ENST00000598808 SLC15A2Q16348 729 aa26.27■■□□□ 1.8
IRF3-221ENST00000598808 FMNL2Q96PY5 1086 aa26.27■■□□□ 1.8
IRF3-221ENST00000598808 TFCP2L1Q9NZI6 479 aa26.27■■□□□ 1.8
IRF3-221ENST00000598808 C4BP0C0L5 1744 aa26.27■■□□□ 1.8
IRF3-221ENST00000598808 ZNF496Q96IT1 587 aaPredicted RBP26.26■■□□□ 1.79
IRF3-221ENST00000598808 TJP1Q07157 1748 aa26.25■■□□□ 1.79
IRF3-221ENST00000598808 DNAJC10Q8IXB1 793 aa26.24■■□□□ 1.79
IRF3-221ENST00000598808 KDM3BQ7LBC6 1761 aa26.24■■□□□ 1.79
IRF3-221ENST00000598808 CASZ1Q86V15 1759 aa26.24■■□□□ 1.79
IRF3-221ENST00000598808 CALD1Q05682 793 aaKnown RBP26.23■■□□□ 1.79
IRF3-221ENST00000598808 ZNF831Q5JPB2 1677 aa26.23■■□□□ 1.79
IRF3-221ENST00000598808 HEG1Q9ULI3 1381 aa26.23■■□□□ 1.79
IRF3-221ENST00000598808 MSH5O43196 834 aa26.23■■□□□ 1.79
IRF3-221ENST00000598808 AKT1S1Q96B36 256 aa26.23■■□□□ 1.79
IRF3-221ENST00000598808 GNPATO15228 680 aa26.22■■□□□ 1.79
IRF3-221ENST00000598808 PHF14O94880 888 aa26.22■■□□□ 1.79
IRF3-221ENST00000598808 COL5A3P25940 1745 aaPredicted RBP26.21■■□□□ 1.79
IRF3-221ENST00000598808 TUBGCP6Q96RT7 1819 aa26.2■■□□□ 1.78
IRF3-221ENST00000598808 VSIG10Q8N0Z9 540 aa26.19■■□□□ 1.78
IRF3-221ENST00000598808 CRKLP46109 303 aaKnown RBP26.18■■□□□ 1.78
IRF3-221ENST00000598808 WWC1Q8IX03 1113 aa26.18■■□□□ 1.78
IRF3-221ENST00000598808 CCDC27Q2M243 656 aa26.17■■□□□ 1.78
IRF3-221ENST00000598808 PDGFDQ9GZP0 370 aaPredicted RBP26.17■■□□□ 1.78
IRF3-221ENST00000598808 CICQ96RK0 1608 aaPredicted RBP26.17■■□□□ 1.78
IRF3-221ENST00000598808 CNTNAP4Q9C0A0 1308 aa26.17■■□□□ 1.78
IRF3-221ENST00000598808 STARD3NLO95772 234 aa26.17■■□□□ 1.78
IRF3-221ENST00000598808 SNRPA1P09661 255 aaKnown RBP26.16■■□□□ 1.78
IRF3-221ENST00000598808 GNAI1P63096 354 aa26.16■■□□□ 1.78
IRF3-221ENST00000598808 SMIM5Q71RC9 77 aa26.16■■□□□ 1.78
IRF3-221ENST00000598808 TEX13AQ9BXU3 409 aaPredicted RBP26.16■■□□□ 1.78
IRF3-221ENST00000598808 IFT57Q9NWB7 429 aa26.16■■□□□ 1.78
IRF3-221ENST00000598808 BABAM1Q9NWV8 329 aa26.16■■□□□ 1.78
IRF3-221ENST00000598808 PRAMEF22A3QJZ6 481 aa26.15■■□□□ 1.78
IRF3-221ENST00000598808 EIF4A1P60842 406 aaKnown RBP26.15■■□□□ 1.78
IRF3-221ENST00000598808 CFAP44Q96MT7 982 aa26.15■■□□□ 1.78
IRF3-221ENST00000598808 CCDC87Q9NVE4 849 aa26.15■■□□□ 1.78
IRF3-221ENST00000598808 RTCBQ9Y3I0 505 aaKnown RBP26.15■■□□□ 1.78
IRF3-221ENST00000598808 PNPLA7Q6ZV29 1317 aa26.14■■□□□ 1.78
IRF3-221ENST00000598808 CYP19A1P11511 503 aaPredicted RBP26.14■■□□□ 1.78
IRF3-221ENST00000598808 CHL1O00533 1208 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms