RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 PALLDQ8WX93 1383 aa11.88□□□□□ -0.51
FARP1-217ENST00000596467 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
FARP1-217ENST00000596467 SSFA2P28290 1259 aa11.87□□□□□ -0.51
FARP1-217ENST00000596467 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
FARP1-217ENST00000596467 TGFB2P61812 414 aa11.86□□□□□ -0.51
FARP1-217ENST00000596467 C16orf71Q8IYS4 520 aaPredicted RBP11.86□□□□□ -0.51
FARP1-217ENST00000596467 AK7Q96M32 723 aa11.86□□□□□ -0.51
FARP1-217ENST00000596467 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
FARP1-217ENST00000596467 CCDC88AQ3V6T2 1871 aa11.85□□□□□ -0.51
FARP1-217ENST00000596467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
FARP1-217ENST00000596467 SLC34A2O95436 690 aa11.85□□□□□ -0.51
FARP1-217ENST00000596467 HTRA3P83110 453 aa11.85□□□□□ -0.51
FARP1-217ENST00000596467 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
FARP1-217ENST00000596467 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
FARP1-217ENST00000596467 SMARCC1Q92922 1105 aaPredicted RBP11.85□□□□□ -0.51
FARP1-217ENST00000596467 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
FARP1-217ENST00000596467 HOXC9P31274 260 aa11.84□□□□□ -0.51
FARP1-217ENST00000596467 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
FARP1-217ENST00000596467 LTV1Q96GA3 475 aaPredicted RBP11.84□□□□□ -0.51
FARP1-217ENST00000596467 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
FARP1-217ENST00000596467 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
FARP1-217ENST00000596467 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
FARP1-217ENST00000596467 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
FARP1-217ENST00000596467 KDM2BQ8NHM5 1336 aa11.83□□□□□ -0.52
FARP1-217ENST00000596467 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
FARP1-217ENST00000596467 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
FARP1-217ENST00000596467 TERF2IPQ9NYB0 399 aa11.82□□□□□ -0.52
FARP1-217ENST00000596467 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
FARP1-217ENST00000596467 BCS1LQ9Y276 419 aa11.82□□□□□ -0.52
FARP1-217ENST00000596467 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
FARP1-217ENST00000596467 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
FARP1-217ENST00000596467 ROCK2O75116 1388 aaKnown RBP11.81□□□□□ -0.52
FARP1-217ENST00000596467 COL5A3P25940 1745 aaPredicted RBP11.81□□□□□ -0.52
FARP1-217ENST00000596467 PHF14O94880 888 aa11.81□□□□□ -0.52
FARP1-217ENST00000596467 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
FARP1-217ENST00000596467 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
FARP1-217ENST00000596467 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
FARP1-217ENST00000596467 MMP10P09238 476 aa11.8□□□□□ -0.52
FARP1-217ENST00000596467 HSPA1AP0DMV8 641 aaKnown RBP11.8□□□□□ -0.52
FARP1-217ENST00000596467 HSPA1BP0DMV9 641 aaKnown RBP11.8□□□□□ -0.52
FARP1-217ENST00000596467 AMPHP49418 695 aa11.8□□□□□ -0.52
FARP1-217ENST00000596467 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
FARP1-217ENST00000596467 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
FARP1-217ENST00000596467 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
FARP1-217ENST00000596467 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
FARP1-217ENST00000596467 PUS7Q96PZ0 661 aaKnown RBP11.8□□□□□ -0.52
FARP1-217ENST00000596467 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
FARP1-217ENST00000596467 A0A0G2JLW4 131 aa11.79□□□□□ -0.52
FARP1-217ENST00000596467 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
FARP1-217ENST00000596467 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
FARP1-217ENST00000596467 SLC12A5Q9H2X9 1139 aa11.79□□□□□ -0.52
FARP1-217ENST00000596467 SMG6Q86US8 1419 aaKnown RBP11.78□□□□□ -0.52
FARP1-217ENST00000596467 DICER1Q9UPY3 1922 aaKnown RBP11.78□□□□□ -0.52
FARP1-217ENST00000596467 LOC102724428A0A0B4J2F2 783 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 FCHSD2O94868 740 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 SIK1P57059 783 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 SMIM5Q71RC9 77 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 L3MBTL2Q969R5 705 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 COG3Q96JB2 828 aa11.78□□□□□ -0.52
FARP1-217ENST00000596467 CYP27B1O15528 508 aa11.77□□□□□ -0.53
FARP1-217ENST00000596467 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
FARP1-217ENST00000596467 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
FARP1-217ENST00000596467 PIGBQ92521 554 aa11.77□□□□□ -0.53
FARP1-217ENST00000596467 RRAGCQ9HB90 399 aa11.77□□□□□ -0.53
FARP1-217ENST00000596467 ZC3H4Q9UPT8 1303 aaKnown RBP11.77□□□□□ -0.53
FARP1-217ENST00000596467 RGL2O15211 777 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 GNPATO15228 680 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 DPEP1P16444 411 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 KCNA3P22001 575 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
FARP1-217ENST00000596467 CCDC87Q9NVE4 849 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 TIAM2Q8IVF5 1701 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
FARP1-217ENST00000596467 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
FARP1-217ENST00000596467 TMF1P82094 1093 aa11.75□□□□□ -0.53
FARP1-217ENST00000596467 DCAF5Q96JK2 942 aa11.75□□□□□ -0.53
FARP1-217ENST00000596467 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
FARP1-217ENST00000596467 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
FARP1-217ENST00000596467 USHBP1Q8N6Y0 703 aa11.74□□□□□ -0.53
FARP1-217ENST00000596467 RNF181Q9P0P0 153 aa11.74□□□□□ -0.53
FARP1-217ENST00000596467 PIM2Q9P1W9 311 aa11.74□□□□□ -0.53
FARP1-217ENST00000596467 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
FARP1-217ENST00000596467 INSRP06213 1382 aa11.74□□□□□ -0.53
FARP1-217ENST00000596467 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
FARP1-217ENST00000596467 NCAPD2Q15021 1401 aa11.74□□□□□ -0.53
FARP1-217ENST00000596467 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
FARP1-217ENST00000596467 FBLN1P23142 703 aa11.73□□□□□ -0.53
FARP1-217ENST00000596467 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
FARP1-217ENST00000596467 ITPK1Q13572 414 aa11.73□□□□□ -0.53
FARP1-217ENST00000596467 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
FARP1-217ENST00000596467 ANKRD26Q9UPS8 1709 aa11.73□□□□□ -0.53
FARP1-217ENST00000596467 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
FARP1-217ENST00000596467 VEGFAP15692 232 aaPredicted RBP11.72□□□□□ -0.53
FARP1-217ENST00000596467 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
FARP1-217ENST00000596467 DALRD3Q5D0E6 543 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms