RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 PALLDQ8WX93 1383 aa14.72□□□□□ -0.05
LIG1-211ENST00000596457 GNAT3A8MTJ3 354 aa14.71□□□□□ -0.05
LIG1-211ENST00000596457 SLC15A2Q16348 729 aa14.71□□□□□ -0.05
LIG1-211ENST00000596457 SLC27A3Q5K4L6 730 aa14.71□□□□□ -0.05
LIG1-211ENST00000596457 RBM42Q9BTD8 480 aaKnown RBP14.71□□□□□ -0.05
LIG1-211ENST00000596457 PNNQ9H307 717 aaKnown RBP14.71□□□□□ -0.05
LIG1-211ENST00000596457 LRRC4BQ9NT99 713 aa14.71□□□□□ -0.05
LIG1-211ENST00000596457 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
LIG1-211ENST00000596457 MAPK8IP3Q9UPT6 1336 aa14.7□□□□□ -0.06
LIG1-211ENST00000596457 CCDC146Q8IYE0 955 aa14.7□□□□□ -0.06
LIG1-211ENST00000596457 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
LIG1-211ENST00000596457 ATG3Q9NT62 314 aa14.7□□□□□ -0.06
LIG1-211ENST00000596457 DLG5Q8TDM6 1919 aa14.7□□□□□ -0.06
LIG1-211ENST00000596457 CCDC184Q52MB2 194 aa14.69□□□□□ -0.06
LIG1-211ENST00000596457 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
LIG1-211ENST00000596457 TEFQ10587 303 aa14.68□□□□□ -0.06
LIG1-211ENST00000596457 PLEKHF1Q96S99 279 aa14.68□□□□□ -0.06
LIG1-211ENST00000596457 SLC52A2Q9HAB3 445 aa14.68□□□□□ -0.06
LIG1-211ENST00000596457 CHD4Q14839 1912 aa14.67□□□□□ -0.06
LIG1-211ENST00000596457 PTCD1O75127 700 aaKnown RBP14.67□□□□□ -0.06
LIG1-211ENST00000596457 ATP6V1AP38606 617 aa14.67□□□□□ -0.06
LIG1-211ENST00000596457 DCTN1Q14203 1278 aa14.67□□□□□ -0.06
LIG1-211ENST00000596457 MCM10Q7L590 875 aa14.67□□□□□ -0.06
LIG1-211ENST00000596457 IL17REQ8NFR9 667 aa14.67□□□□□ -0.06
LIG1-211ENST00000596457 ADAMTS8Q9UP79 889 aa14.67□□□□□ -0.06
LIG1-211ENST00000596457 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
LIG1-211ENST00000596457 TAF1LQ8IZX4 1826 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 C5P01031 1676 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 LOC102724428A0A0B4J2F2 783 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 SIK1P57059 783 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 SLC39A6Q13433 755 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 NEUROD2Q15784 382 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 ZNF827Q17R98 1081 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 MRS2Q9HD23 443 aa14.66□□□□□ -0.06
LIG1-211ENST00000596457 NFE2L2Q16236 605 aa14.65□□□□□ -0.06
LIG1-211ENST00000596457 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
LIG1-211ENST00000596457 RRP7AQ9Y3A4 280 aaKnown RBP14.65□□□□□ -0.06
LIG1-211ENST00000596457 ADAMTS7Q9UKP4 1686 aa14.65□□□□□ -0.06
LIG1-211ENST00000596457 PAPPAQ13219 1627 aa14.64□□□□□ -0.07
LIG1-211ENST00000596457 GIGYF1O75420 1035 aaPredicted RBP14.64□□□□□ -0.07
LIG1-211ENST00000596457 SLC16A10Q8TF71 515 aa14.64□□□□□ -0.07
LIG1-211ENST00000596457 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
LIG1-211ENST00000596457 MTFR1LQ9H019 292 aa14.64□□□□□ -0.07
LIG1-211ENST00000596457 MSH5O43196 834 aa14.63□□□□□ -0.07
LIG1-211ENST00000596457 RIPK4P57078 832 aa14.63□□□□□ -0.07
LIG1-211ENST00000596457 QSER1Q2KHR3 1735 aa14.63□□□□□ -0.07
LIG1-211ENST00000596457 SIPA1L3O60292 1781 aaPredicted RBP14.62□□□□□ -0.07
LIG1-211ENST00000596457 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 BTBD11A6QL63 1104 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 ITPK1Q13572 414 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 LINC00116Q8NCU8 138 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 AK7Q96M32 723 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 PDGFDQ9GZP0 370 aaPredicted RBP14.62□□□□□ -0.07
LIG1-211ENST00000596457 UTRNP46939 3433 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 MRC1P22897 1456 aa14.62□□□□□ -0.07
LIG1-211ENST00000596457 C4BP0C0L5 1744 aa14.61□□□□□ -0.07
LIG1-211ENST00000596457 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
LIG1-211ENST00000596457 TMPOP42166 694 aaKnown RBP14.61□□□□□ -0.07
LIG1-211ENST00000596457 SLC4A9Q96Q91 983 aa14.61□□□□□ -0.07
LIG1-211ENST00000596457 THUMPD2Q9BTF0 503 aaKnown RBP14.61□□□□□ -0.07
LIG1-211ENST00000596457 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
LIG1-211ENST00000596457 SMIM5Q71RC9 77 aa14.6□□□□□ -0.07
LIG1-211ENST00000596457 CEMIPQ8WUJ3 1361 aa14.6□□□□□ -0.07
LIG1-211ENST00000596457 KCNQ3O43525 872 aa14.59□□□□□ -0.07
LIG1-211ENST00000596457 PHF14O94880 888 aa14.59□□□□□ -0.07
LIG1-211ENST00000596457 FAM9BQ8IZU0 186 aa14.59□□□□□ -0.07
LIG1-211ENST00000596457 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
LIG1-211ENST00000596457 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
LIG1-211ENST00000596457 PTGER2P43116 358 aa14.58□□□□□ -0.08
LIG1-211ENST00000596457 TAF7Q15545 349 aaPredicted RBP14.58□□□□□ -0.08
LIG1-211ENST00000596457 ZNF790Q6PG37 636 aa14.58□□□□□ -0.08
LIG1-211ENST00000596457 DNAJC10Q8IXB1 793 aa14.58□□□□□ -0.08
LIG1-211ENST00000596457 PNPLA7Q6ZV29 1317 aa14.58□□□□□ -0.08
LIG1-211ENST00000596457 TJP1Q07157 1748 aa14.58□□□□□ -0.08
LIG1-211ENST00000596457 APAF1O14727 1248 aa14.57□□□□□ -0.08
LIG1-211ENST00000596457 GNPATO15228 680 aa14.57□□□□□ -0.08
LIG1-211ENST00000596457 FLAD1Q8NFF5 587 aa14.57□□□□□ -0.08
LIG1-211ENST00000596457 PNISRQ8TF01 805 aaKnown RBP14.57□□□□□ -0.08
LIG1-211ENST00000596457 COL5A3P25940 1745 aaPredicted RBP14.57□□□□□ -0.08
LIG1-211ENST00000596457 ZNF831Q5JPB2 1677 aa14.56□□□□□ -0.08
LIG1-211ENST00000596457 UBR2Q8IWV8 1755 aa14.56□□□□□ -0.08
LIG1-211ENST00000596457 LMOD3Q0VAK6 560 aa14.56□□□□□ -0.08
LIG1-211ENST00000596457 DIEXFQ68CQ4 756 aaKnown RBP14.56□□□□□ -0.08
LIG1-211ENST00000596457 COL23A1Q86Y22 540 aaPredicted RBP14.56□□□□□ -0.08
LIG1-211ENST00000596457 ZNF496Q96IT1 587 aaPredicted RBP14.56□□□□□ -0.08
LIG1-211ENST00000596457 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
LIG1-211ENST00000596457 LAS1LQ9Y4W2 734 aaKnown RBP14.56□□□□□ -0.08
LIG1-211ENST00000596457 UBR3Q6ZT12 1888 aa14.56□□□□□ -0.08
LIG1-211ENST00000596457 KCPQ6ZWJ8 1503 aa14.56□□□□□ -0.08
LIG1-211ENST00000596457 FMNL2Q96PY5 1086 aa14.55□□□□□ -0.08
LIG1-211ENST00000596457 POLD1P28340 1107 aa14.54□□□□□ -0.08
LIG1-211ENST00000596457 CRKLP46109 303 aaKnown RBP14.54□□□□□ -0.08
LIG1-211ENST00000596457 AMIGO3Q86WK7 504 aa14.54□□□□□ -0.08
LIG1-211ENST00000596457 ARXQ96QS3 562 aa14.54□□□□□ -0.08
LIG1-211ENST00000596457 RTCBQ9Y3I0 505 aaKnown RBP14.54□□□□□ -0.08
LIG1-211ENST00000596457 COL24A1Q17RW2 1714 aa14.54□□□□□ -0.08
LIG1-211ENST00000596457 MYH14Q7Z406 1995 aaKnown RBP14.53□□□□□ -0.08
LIG1-211ENST00000596457 HEG1Q9ULI3 1381 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms