RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 SMARCC1Q92922 1105 aaPredicted RBP14.83□□□□□ -0.04
XRCC1-204ENST00000594511 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.04
XRCC1-204ENST00000594511 ZNF831Q5JPB2 1677 aa14.83□□□□□ -0.04
XRCC1-204ENST00000594511 SLC27A3Q5K4L6 730 aa14.82□□□□□ -0.04
XRCC1-204ENST00000594511 ATG3Q9NT62 314 aa14.82□□□□□ -0.04
XRCC1-204ENST00000594511 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
XRCC1-204ENST00000594511 TXNRD1Q16881 649 aa14.81□□□□□ -0.04
XRCC1-204ENST00000594511 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
XRCC1-204ENST00000594511 SYTL4Q96C24 671 aaPredicted RBP14.81□□□□□ -0.04
XRCC1-204ENST00000594511 ASAP1Q9ULH1 1129 aa14.81□□□□□ -0.04
XRCC1-204ENST00000594511 TRIM35Q9UPQ4 493 aa14.81□□□□□ -0.04
XRCC1-204ENST00000594511 RIPK4P57078 832 aa14.8□□□□□ -0.04
XRCC1-204ENST00000594511 LRRC4BQ9NT99 713 aa14.8□□□□□ -0.04
XRCC1-204ENST00000594511 APAF1O14727 1248 aa14.79□□□□□ -0.04
XRCC1-204ENST00000594511 HMGB2P26583 209 aaKnown RBP14.79□□□□□ -0.04
XRCC1-204ENST00000594511 LMOD3Q0VAK6 560 aa14.79□□□□□ -0.04
XRCC1-204ENST00000594511 CCDC27Q2M243 656 aa14.79□□□□□ -0.04
XRCC1-204ENST00000594511 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
XRCC1-204ENST00000594511 PALLDQ8WX93 1383 aa14.79□□□□□ -0.04
XRCC1-204ENST00000594511 RTF1Q92541 710 aaKnown RBP14.79□□□□□ -0.04
XRCC1-204ENST00000594511 CICQ96RK0 1608 aaPredicted RBP14.79□□□□□ -0.04
XRCC1-204ENST00000594511 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
XRCC1-204ENST00000594511 MCM10Q7L590 875 aa14.78□□□□□ -0.04
XRCC1-204ENST00000594511 NGEFQ8N5V2 710 aa14.78□□□□□ -0.04
XRCC1-204ENST00000594511 BABAM1Q9NWV8 329 aa14.78□□□□□ -0.04
XRCC1-204ENST00000594511 UBR2Q8IWV8 1755 aa14.78□□□□□ -0.04
XRCC1-204ENST00000594511 TEFQ10587 303 aa14.77□□□□□ -0.05
XRCC1-204ENST00000594511 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
XRCC1-204ENST00000594511 SLC4A9Q96Q91 983 aa14.77□□□□□ -0.05
XRCC1-204ENST00000594511 LOC102724428A0A0B4J2F2 783 aa14.76□□□□□ -0.05
XRCC1-204ENST00000594511 SIK1P57059 783 aa14.76□□□□□ -0.05
XRCC1-204ENST00000594511 VSIG10Q8N0Z9 540 aa14.76□□□□□ -0.05
XRCC1-204ENST00000594511 KCPQ6ZWJ8 1503 aa14.76□□□□□ -0.05
XRCC1-204ENST00000594511 TAF1LQ8IZX4 1826 aa14.76□□□□□ -0.05
XRCC1-204ENST00000594511 ZNF790Q6PG37 636 aa14.75□□□□□ -0.05
XRCC1-204ENST00000594511 RRP7AQ9Y3A4 280 aaKnown RBP14.75□□□□□ -0.05
XRCC1-204ENST00000594511 HEG1Q9ULI3 1381 aa14.74□□□□□ -0.05
XRCC1-204ENST00000594511 CHL1O00533 1208 aa14.74□□□□□ -0.05
XRCC1-204ENST00000594511 FAM9BQ8IZU0 186 aa14.74□□□□□ -0.05
XRCC1-204ENST00000594511 AKT1S1Q96B36 256 aa14.74□□□□□ -0.05
XRCC1-204ENST00000594511 KDM3BQ7LBC6 1761 aa14.73□□□□□ -0.05
XRCC1-204ENST00000594511 BTBD11A6QL63 1104 aa14.73□□□□□ -0.05
XRCC1-204ENST00000594511 ZNF853P0CG23 659 aa14.73□□□□□ -0.05
XRCC1-204ENST00000594511 SLC39A6Q13433 755 aa14.73□□□□□ -0.05
XRCC1-204ENST00000594511 ITPK1Q13572 414 aa14.73□□□□□ -0.05
XRCC1-204ENST00000594511 THUMPD2Q9BTF0 503 aaKnown RBP14.73□□□□□ -0.05
XRCC1-204ENST00000594511 CCNL1Q9UK58 526 aaPredicted RBP14.73□□□□□ -0.05
XRCC1-204ENST00000594511 C5P01031 1676 aa14.72□□□□□ -0.05
XRCC1-204ENST00000594511 RC3H1Q5TC82 1133 aaKnown RBP14.72□□□□□ -0.05
XRCC1-204ENST00000594511 WWC1Q8IX03 1113 aa14.72□□□□□ -0.05
XRCC1-204ENST00000594511 KCNQ3O43525 872 aa14.71□□□□□ -0.05
XRCC1-204ENST00000594511 NEUROD2Q15784 382 aa14.71□□□□□ -0.05
XRCC1-204ENST00000594511 NBPF14Q5TI25 921 aa14.71□□□□□ -0.05
XRCC1-204ENST00000594511 ZNF496Q96IT1 587 aaPredicted RBP14.71□□□□□ -0.05
XRCC1-204ENST00000594511 ANO8Q9HCE9 1232 aaPredicted RBP14.71□□□□□ -0.05
XRCC1-204ENST00000594511 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
XRCC1-204ENST00000594511 TJP1Q07157 1748 aa14.71□□□□□ -0.05
XRCC1-204ENST00000594511 QSER1Q2KHR3 1735 aa14.71□□□□□ -0.05
XRCC1-204ENST00000594511 IL16Q14005 1332 aa14.7□□□□□ -0.06
XRCC1-204ENST00000594511 ZNF521Q96K83 1311 aa14.7□□□□□ -0.06
XRCC1-204ENST00000594511 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
XRCC1-204ENST00000594511 KCNQ4P56696 695 aa14.7□□□□□ -0.06
XRCC1-204ENST00000594511 SLC15A2Q16348 729 aa14.7□□□□□ -0.06
XRCC1-204ENST00000594511 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
XRCC1-204ENST00000594511 PTCD1O75127 700 aaKnown RBP14.69□□□□□ -0.06
XRCC1-204ENST00000594511 EIF4A1P60842 406 aaKnown RBP14.69□□□□□ -0.06
XRCC1-204ENST00000594511 CALD1Q05682 793 aaKnown RBP14.69□□□□□ -0.06
XRCC1-204ENST00000594511 WDR63Q8IWG1 891 aa14.69□□□□□ -0.06
XRCC1-204ENST00000594511 LINC00116Q8NCU8 138 aa14.69□□□□□ -0.06
XRCC1-204ENST00000594511 FMNL2Q96PY5 1086 aa14.69□□□□□ -0.06
XRCC1-204ENST00000594511 C4BP0C0L5 1744 aa14.69□□□□□ -0.06
XRCC1-204ENST00000594511 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
XRCC1-204ENST00000594511 MYH14Q7Z406 1995 aaKnown RBP14.68□□□□□ -0.06
XRCC1-204ENST00000594511 ZNF827Q17R98 1081 aa14.68□□□□□ -0.06
XRCC1-204ENST00000594511 TTC5Q8N0Z6 440 aa14.68□□□□□ -0.06
XRCC1-204ENST00000594511 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
XRCC1-204ENST00000594511 TEX13AQ9BXU3 409 aaPredicted RBP14.68□□□□□ -0.06
XRCC1-204ENST00000594511 IFT57Q9NWB7 429 aa14.68□□□□□ -0.06
XRCC1-204ENST00000594511 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
XRCC1-204ENST00000594511 CYP19A1P11511 503 aaPredicted RBP14.67□□□□□ -0.06
XRCC1-204ENST00000594511 STK32BQ9NY57 414 aa14.67□□□□□ -0.06
XRCC1-204ENST00000594511 UBR3Q6ZT12 1888 aa14.66□□□□□ -0.06
XRCC1-204ENST00000594511 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
XRCC1-204ENST00000594511 GNAI1P63096 354 aa14.66□□□□□ -0.06
XRCC1-204ENST00000594511 INTS5Q6P9B9 1019 aaKnown RBP14.66□□□□□ -0.06
XRCC1-204ENST00000594511 DNAJC10Q8IXB1 793 aa14.66□□□□□ -0.06
XRCC1-204ENST00000594511 RPS6KA4O75676 772 aa14.65□□□□□ -0.06
XRCC1-204ENST00000594511 SNRPA1P09661 255 aaKnown RBP14.65□□□□□ -0.06
XRCC1-204ENST00000594511 TSPYL4Q9UJ04 414 aa14.65□□□□□ -0.06
XRCC1-204ENST00000594511 TUBGCP6Q96RT7 1819 aa14.64□□□□□ -0.07
XRCC1-204ENST00000594511 CRKLP46109 303 aaKnown RBP14.64□□□□□ -0.07
XRCC1-204ENST00000594511 USP16Q9Y5T5 823 aa14.64□□□□□ -0.07
XRCC1-204ENST00000594511 CASZ1Q86V15 1759 aa14.64□□□□□ -0.07
XRCC1-204ENST00000594511 PNPLA7Q6ZV29 1317 aa14.64□□□□□ -0.07
XRCC1-204ENST00000594511 SSFA2P28290 1259 aa14.63□□□□□ -0.07
XRCC1-204ENST00000594511 R3HDM1Q15032 1099 aaKnown RBP14.63□□□□□ -0.07
XRCC1-204ENST00000594511 AMIGO3Q86WK7 504 aa14.63□□□□□ -0.07
XRCC1-204ENST00000594511 FLAD1Q8NFF5 587 aa14.63□□□□□ -0.07
XRCC1-204ENST00000594511 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
XRCC1-204ENST00000594511 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms