RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 RNF123Q5XPI4 1314 aa18.2■□□□□ 0.5
SYMPK-202ENST00000593504 TBC1D2Q9BYX2 928 aa18.2■□□□□ 0.5
SYMPK-202ENST00000593504 IQGAP3Q86VI3 1631 aa18.2■□□□□ 0.5
SYMPK-202ENST00000593504 MBD3O95983 291 aa18.2■□□□□ 0.5
SYMPK-202ENST00000593504 PDCP20941 246 aa18.2■□□□□ 0.5
SYMPK-202ENST00000593504 KRT24Q2M2I5 525 aa18.2■□□□□ 0.5
SYMPK-202ENST00000593504 MCM4P33991 863 aa18.2■□□□□ 0.5
SYMPK-202ENST00000593504 CCDC85AQ96PX6 553 aaPredicted RBP18.2■□□□□ 0.5
SYMPK-202ENST00000593504 TMEM2Q9UHN6 1383 aa18.19■□□□□ 0.5
SYMPK-202ENST00000593504 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
SYMPK-202ENST00000593504 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
SYMPK-202ENST00000593504 PRDM15P57071 1507 aaPredicted RBP18.19■□□□□ 0.5
SYMPK-202ENST00000593504 FKBP4Q02790 459 aaKnown RBP eCLIP18.19■□□□□ 0.5
SYMPK-202ENST00000593504 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
SYMPK-202ENST00000593504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.19■□□□□ 0.5
SYMPK-202ENST00000593504 CREBRFQ8IUR6 639 aa18.19■□□□□ 0.5
SYMPK-202ENST00000593504 LRRIQ1Q96JM4 1722 aa18.19■□□□□ 0.5
SYMPK-202ENST00000593504 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.19■□□□□ 0.57e-7■■■■□ 19.5
SYMPK-202ENST00000593504 LRRC59Q96AG4 307 aaKnown RBP18.18■□□□□ 0.5
SYMPK-202ENST00000593504 ANKRD1Q15327 319 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 TBC1D32Q96NH3 1257 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 HOXC9P31274 260 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 CCDC73Q6ZRK6 1079 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 PPP1R42Q7Z4L9 355 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 PDRG1Q9NUG6 133 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
SYMPK-202ENST00000593504 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 C8orf34Q49A92 452 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 TTC22Q5TAA0 569 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 SYNMO15061 1565 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 STK3Q13188 491 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 AKAP4Q5JQC9 854 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 BLOC1S2Q6QNY1 142 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 ANKRD44Q8N8A2 993 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 FBXW7Q969H0 707 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 NASPP49321 788 aaPredicted RBP18.17■□□□□ 0.5
SYMPK-202ENST00000593504 KIF1BO60333 1816 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 FIBPO43427 364 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
SYMPK-202ENST00000593504 WDR33Q9C0J8 1336 aaKnown RBP18.17■□□□□ 0.5
SYMPK-202ENST00000593504 TET3O43151 1660 aa18.16■□□□□ 0.5
SYMPK-202ENST00000593504 ZBTB40Q9NUA8 1239 aa18.16■□□□□ 0.5
SYMPK-202ENST00000593504 MSH6P52701 1360 aa18.16■□□□□ 0.5
SYMPK-202ENST00000593504 MARCH6O60337 910 aa18.16■□□□□ 0.5
SYMPK-202ENST00000593504 SASS6Q6UVJ0 657 aa18.16■□□□□ 0.5
SYMPK-202ENST00000593504 MPHOSPH8Q99549 860 aa18.16■□□□□ 0.5
SYMPK-202ENST00000593504 BOLA2Q9H3K6 86 aa18.16■□□□□ 0.5
SYMPK-202ENST00000593504 SAFBQ15424 915 aaKnown RBP eCLIP18.16■□□□□ 0.5
SYMPK-202ENST00000593504 CCDC8Q9H0W5 538 aaPredicted RBP18.16■□□□□ 0.5
SYMPK-202ENST00000593504 NPHP3Q7Z494 1330 aa18.15■□□□□ 0.5
SYMPK-202ENST00000593504 ARAP3Q8WWN8 1544 aa18.15■□□□□ 0.5
SYMPK-202ENST00000593504 RNF214Q8ND24 703 aa18.15■□□□□ 0.5
SYMPK-202ENST00000593504 UPF3BQ9BZI7 483 aaKnown RBP18.15■□□□□ 0.5
SYMPK-202ENST00000593504 A0A087WZG4 1122 aa18.15■□□□□ 0.5
SYMPK-202ENST00000593504 TSHZ3Q63HK5 1081 aa18.15■□□□□ 0.5
SYMPK-202ENST00000593504 MAP3K5Q99683 1374 aa18.14■□□□□ 0.5
SYMPK-202ENST00000593504 CASTP20810 708 aaKnown RBP18.14■□□□□ 0.49
SYMPK-202ENST00000593504 C19orf44Q9H6X5 657 aa18.14■□□□□ 0.49
SYMPK-202ENST00000593504 LTKP29376 864 aa18.14■□□□□ 0.49
SYMPK-202ENST00000593504 GCP02774 474 aa18.13■□□□□ 0.49
SYMPK-202ENST00000593504 UNC13BO14795 1591 aa18.13■□□□□ 0.49
SYMPK-202ENST00000593504 SART3Q15020 963 aaKnown RBP18.13■□□□□ 0.49
SYMPK-202ENST00000593504 ZSCAN31Q96LW9 406 aaPredicted RBP18.13■□□□□ 0.49
SYMPK-202ENST00000593504 SBNO1A3KN83 1393 aa18.13■□□□□ 0.49
SYMPK-202ENST00000593504 CDC42BPBQ9Y5S2 1711 aa18.13■□□□□ 0.49
SYMPK-202ENST00000593504 KDM4AO75164 1064 aa18.13■□□□□ 0.49
SYMPK-202ENST00000593504 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
SYMPK-202ENST00000593504 IP6K1Q92551 441 aa18.12■□□□□ 0.49
SYMPK-202ENST00000593504 GNL3LQ9NVN8 582 aaKnown RBP18.12■□□□□ 0.49
SYMPK-202ENST00000593504 PRPF40BQ6NWY9 871 aaKnown RBP18.12■□□□□ 0.49
SYMPK-202ENST00000593504 DHX16O60231 1041 aaKnown RBP18.12■□□□□ 0.49
SYMPK-202ENST00000593504 TPD52L1Q16890 204 aaPredicted RBP18.12■□□□□ 0.49
SYMPK-202ENST00000593504 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
SYMPK-202ENST00000593504 SIRT1Q96EB6 747 aa18.12■□□□□ 0.49
SYMPK-202ENST00000593504 RRP12Q5JTH9 1297 aaKnown RBP18.12■□□□□ 0.49
SYMPK-202ENST00000593504 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
SYMPK-202ENST00000593504 RAD21O60216 631 aa18.11■□□□□ 0.49
SYMPK-202ENST00000593504 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
SYMPK-202ENST00000593504 KRT32Q14532 448 aa18.11■□□□□ 0.49
SYMPK-202ENST00000593504 LARP1BQ659C4 914 aaKnown RBP18.11■□□□□ 0.49
SYMPK-202ENST00000593504 ATP5J2-PTCD1G3V325 749 aa18.11■□□□□ 0.49
SYMPK-202ENST00000593504 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
SYMPK-202ENST00000593504 ECHDC1Q9NTX5 307 aa18.11■□□□□ 0.49
SYMPK-202ENST00000593504 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 ADAMTS2O95450 1211 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 SMC5Q8IY18 1101 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 METTL24Q5JXM2 366 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
SYMPK-202ENST00000593504 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 EFCAB6Q5THR3 1501 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 SDSP20132 328 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 VPS53Q5VIR6 699 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 TRIM34Q9BYJ4 488 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 ABCC3O15438 1527 aa18.1■□□□□ 0.49
SYMPK-202ENST00000593504 LETM1O95202 739 aaPredicted RBP18.09■□□□□ 0.49
SYMPK-202ENST00000593504 RHPN1Q8TCX5 695 aa18.09■□□□□ 0.49
SYMPK-202ENST00000593504 CLSTN1O94985 981 aa18.09■□□□□ 0.49
SYMPK-202ENST00000593504 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms