RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
CACNA1A-211ENST00000592864 IL16Q14005 1332 aa18.17■□□□□ 0.5
CACNA1A-211ENST00000592864 MRC1P22897 1456 aa18.17■□□□□ 0.5
CACNA1A-211ENST00000592864 NHSQ6T4R5 1651 aa18.17■□□□□ 0.5
CACNA1A-211ENST00000592864 SIPA1L3O60292 1781 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-211ENST00000592864 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-211ENST00000592864 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-211ENST00000592864 EP400Q96L91 3159 aa18.16■□□□□ 0.5
CACNA1A-211ENST00000592864 GNAI1P63096 354 aa18.16■□□□□ 0.5
CACNA1A-211ENST00000592864 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
CACNA1A-211ENST00000592864 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
CACNA1A-211ENST00000592864 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
CACNA1A-211ENST00000592864 PIGBQ92521 554 aa18.15■□□□□ 0.5
CACNA1A-211ENST00000592864 IFT57Q9NWB7 429 aa18.15■□□□□ 0.5
CACNA1A-211ENST00000592864 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
CACNA1A-211ENST00000592864 KCNQ2O43526 872 aa18.14■□□□□ 0.49
CACNA1A-211ENST00000592864 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
CACNA1A-211ENST00000592864 TRIM37O94972 964 aa18.13■□□□□ 0.49
CACNA1A-211ENST00000592864 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-211ENST00000592864 CCDC125Q86Z20 511 aa18.12■□□□□ 0.49
CACNA1A-211ENST00000592864 SMARCC1Q92922 1105 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-211ENST00000592864 CHL1O00533 1208 aa18.12■□□□□ 0.49
CACNA1A-211ENST00000592864 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-211ENST00000592864 BTAF1O14981 1849 aa18.11■□□□□ 0.49
CACNA1A-211ENST00000592864 E9PSI1 815 aa18.11■□□□□ 0.49
CACNA1A-211ENST00000592864 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
CACNA1A-211ENST00000592864 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
CACNA1A-211ENST00000592864 MYH16Q9H6N6 1097 aa18.11■□□□□ 0.49
CACNA1A-211ENST00000592864 TSPYL4Q9UJ04 414 aa18.11■□□□□ 0.49
CACNA1A-211ENST00000592864 SF3B2Q13435 895 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-211ENST00000592864 ZNF790Q6PG37 636 aa18.09■□□□□ 0.49
CACNA1A-211ENST00000592864 KDM3BQ7LBC6 1761 aa18.09■□□□□ 0.49
CACNA1A-211ENST00000592864 DEFB132Q7Z7B7 95 aa18.09■□□□□ 0.49
CACNA1A-211ENST00000592864 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
CACNA1A-211ENST00000592864 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
CACNA1A-211ENST00000592864 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-211ENST00000592864 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
CACNA1A-211ENST00000592864 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.48
CACNA1A-211ENST00000592864 APBA3O96018 575 aa18.07■□□□□ 0.48
CACNA1A-211ENST00000592864 SLC39A6Q13433 755 aa18.07■□□□□ 0.48
CACNA1A-211ENST00000592864 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
CACNA1A-211ENST00000592864 PAPPAQ13219 1627 aa18.07■□□□□ 0.48
CACNA1A-211ENST00000592864 PLSCR1O15162 318 aa18.06■□□□□ 0.48
CACNA1A-211ENST00000592864 PTF1AQ7RTS3 328 aa18.06■□□□□ 0.48
CACNA1A-211ENST00000592864 FMNL2Q96PY5 1086 aa18.06■□□□□ 0.48
CACNA1A-211ENST00000592864 TNS1Q9HBL0 1735 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-211ENST00000592864 UBR2Q8IWV8 1755 aa18.05■□□□□ 0.48
CACNA1A-211ENST00000592864 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
CACNA1A-211ENST00000592864 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-211ENST00000592864 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-211ENST00000592864 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
CACNA1A-211ENST00000592864 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-211ENST00000592864 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-211ENST00000592864 KCNQ3O43525 872 aa18.03■□□□□ 0.48
CACNA1A-211ENST00000592864 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-211ENST00000592864 BAG6P46379 1132 aa18.03■□□□□ 0.48
CACNA1A-211ENST00000592864 CDCA7LQ96GN5 454 aa18.03■□□□□ 0.48
CACNA1A-211ENST00000592864 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-211ENST00000592864 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
CACNA1A-211ENST00000592864 LY75O60449 1722 aa18.02■□□□□ 0.48
CACNA1A-211ENST00000592864 TSR2Q969E8 191 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-211ENST00000592864 ZNF496Q96IT1 587 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-211ENST00000592864 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
CACNA1A-211ENST00000592864 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 SOS1Q07889 1333 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 ZNF831Q5JPB2 1677 aa18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 RGPD3A6NKT7 1758 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 RGPD4Q7Z3J3 1758 aa18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 SIK1P57059 783 aa18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 KCPQ6ZWJ8 1503 aa18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 HEG1Q9ULI3 1381 aa18.01■□□□□ 0.47
CACNA1A-211ENST00000592864 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
CACNA1A-211ENST00000592864 HOXB7P09629 217 aa17.99■□□□□ 0.47
CACNA1A-211ENST00000592864 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
CACNA1A-211ENST00000592864 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-211ENST00000592864 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-211ENST00000592864 CCNL1Q9UK58 526 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-211ENST00000592864 SRCAPQ6ZRS2 3230 aa17.98■□□□□ 0.47
CACNA1A-211ENST00000592864 STARD3NLO95772 234 aa17.97■□□□□ 0.47
CACNA1A-211ENST00000592864 CT47B1P0C2W7 299 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-211ENST00000592864 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
CACNA1A-211ENST00000592864 CICQ96RK0 1608 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-211ENST00000592864 EN1Q05925 392 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-211ENST00000592864 TWISTNBQ3B726 338 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-211ENST00000592864 C8orf58Q8NAV2 365 aa17.96■□□□□ 0.47
CACNA1A-211ENST00000592864 CAMKK2Q96RR4 588 aa17.96■□□□□ 0.47
CACNA1A-211ENST00000592864 ELL2O00472 640 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 ZNF428Q96B54 188 aa17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 SLC4A9Q96Q91 983 aa17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 TAF1LQ8IZX4 1826 aa17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 TJP1Q07157 1748 aa17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 KRT24Q2M2I5 525 aa17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 DNAJC10Q8IXB1 793 aa17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 PROM2Q8N271 834 aa17.94■□□□□ 0.46
CACNA1A-211ENST00000592864 LAMB4A4D0S4 1761 aa17.93■□□□□ 0.46
CACNA1A-211ENST00000592864 PSDA5PKW4 1024 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-211ENST00000592864 VAMP4O75379 141 aa17.93■□□□□ 0.46
CACNA1A-211ENST00000592864 EZH2Q15910 746 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms