RNA–Protein interactions for RNA: ENST00000591762.1

SPHK1-209, Transcript of sphingosine kinase 1, humanhuman

TSL 2

Gene SPHK1, Length 2,502 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-209ENST00000591762 MEIS3Q99687 375 aa21.97■■□□□ 1.11
SPHK1-209ENST00000591762 STK31Q9BXU1 1019 aa21.97■■□□□ 1.11
SPHK1-209ENST00000591762 HSP90AB1P08238 724 aaKnown RBP21.95■■□□□ 1.1
SPHK1-209ENST00000591762 DDX11L8A8MPP1 907 aa21.95■■□□□ 1.1
SPHK1-209ENST00000591762 RGPD2P0DJD1 1756 aa21.94■■□□□ 1.1
SPHK1-209ENST00000591762 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
SPHK1-209ENST00000591762 MPRIPQ6WCQ1 1025 aa21.94■■□□□ 1.1
SPHK1-209ENST00000591762 FOXD4L1Q9NU39 408 aa21.94■■□□□ 1.1
SPHK1-209ENST00000591762 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
SPHK1-209ENST00000591762 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
SPHK1-209ENST00000591762 BMP2KLQ5H9B9 411 aa21.92■■□□□ 1.1
SPHK1-209ENST00000591762 DDIT3P35638 169 aa21.92■■□□□ 1.1
SPHK1-209ENST00000591762 TNPO1Q92973 898 aaKnown RBP21.92■■□□□ 1.1
SPHK1-209ENST00000591762 FLIIQ13045 1269 aa21.91■■□□□ 1.1
SPHK1-209ENST00000591762 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
SPHK1-209ENST00000591762 CABLES1Q8TDN4 633 aa21.91■■□□□ 1.1
SPHK1-209ENST00000591762 SNX21Q969T3 373 aa21.91■■□□□ 1.1
SPHK1-209ENST00000591762 KCNQ3O43525 872 aa21.91■■□□□ 1.1
SPHK1-209ENST00000591762 PLEKHO1Q53GL0 409 aaPredicted RBP21.91■■□□□ 1.1
SPHK1-209ENST00000591762 LRRC37A3O60309 1634 aa21.91■■□□□ 1.1
SPHK1-209ENST00000591762 HSP90AA1P07900 732 aaKnown RBP21.9■■□□□ 1.1
SPHK1-209ENST00000591762 MST1RQ04912 1400 aa21.9■■□□□ 1.1
SPHK1-209ENST00000591762 SLIT3O75094 1523 aa21.9■■□□□ 1.1
SPHK1-209ENST00000591762 CD2BP2O95400 341 aaKnown RBP21.9■■□□□ 1.1
SPHK1-209ENST00000591762 EIF2S2P20042 333 aaKnown RBP21.9■■□□□ 1.1
SPHK1-209ENST00000591762 MRE11P49959 708 aa21.9■■□□□ 1.1
SPHK1-209ENST00000591762 CEP85Q6P2H3 762 aa21.9■■□□□ 1.1
SPHK1-209ENST00000591762 APBB1O00213 710 aa21.89■■□□□ 1.1
SPHK1-209ENST00000591762 ANKRD44Q8N8A2 993 aa21.89■■□□□ 1.1
SPHK1-209ENST00000591762 STRCP1A6NGW2 1772 aa21.89■■□□□ 1.09
SPHK1-209ENST00000591762 CEMIPQ8WUJ3 1361 aa21.89■■□□□ 1.09
SPHK1-209ENST00000591762 KIF2CQ99661 725 aa21.89■■□□□ 1.09
SPHK1-209ENST00000591762 TRPM3Q9HCF6 1732 aaPredicted RBP21.89■■□□□ 1.09
SPHK1-209ENST00000591762 TEFQ10587 303 aa21.88■■□□□ 1.09
SPHK1-209ENST00000591762 AKAP4Q5JQC9 854 aa21.88■■□□□ 1.09
SPHK1-209ENST00000591762 HDGFL1Q5TGJ6 251 aa21.88■■□□□ 1.09
SPHK1-209ENST00000591762 DCTPP1Q9H773 170 aa21.88■■□□□ 1.09
SPHK1-209ENST00000591762 TBC1D9Q6ZT07 1266 aa21.88■■□□□ 1.09
SPHK1-209ENST00000591762 GRPEL1Q9HAV7 217 aa21.88■■□□□ 1.09
SPHK1-209ENST00000591762 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
SPHK1-209ENST00000591762 BABAM1Q9NWV8 329 aa21.87■■□□□ 1.09
SPHK1-209ENST00000591762 ATP10DQ9P241 1426 aa21.87■■□□□ 1.09
SPHK1-209ENST00000591762 CCT4P50991 539 aaKnown RBP21.87■■□□□ 1.09
SPHK1-209ENST00000591762 PHAXQ9H814 394 aaKnown RBP21.87■■□□□ 1.09
SPHK1-209ENST00000591762 C1orf141Q5JVX7 400 aa21.86■■□□□ 1.09
SPHK1-209ENST00000591762 RPAP2Q8IXW5 612 aaPredicted RBP21.86■■□□□ 1.09
SPHK1-209ENST00000591762 C16orf71Q8IYS4 520 aaPredicted RBP21.86■■□□□ 1.09
SPHK1-209ENST00000591762 BTBD11A6QL63 1104 aa21.86■■□□□ 1.09
SPHK1-209ENST00000591762 EIF4A1P60842 406 aaKnown RBP21.86■■□□□ 1.09
SPHK1-209ENST00000591762 AMOTQ4VCS5 1084 aa21.86■■□□□ 1.09
SPHK1-209ENST00000591762 CADPS2Q86UW7 1296 aa21.86■■□□□ 1.09
SPHK1-209ENST00000591762 GBP4Q96PP9 640 aa21.85■■□□□ 1.09
SPHK1-209ENST00000591762 PXDNQ92626 1479 aa21.85■■□□□ 1.09
SPHK1-209ENST00000591762 PHRF1Q9P1Y6 1649 aaKnown RBP21.84■■□□□ 1.09
SPHK1-209ENST00000591762 KIF1AQ12756 1690 aa21.84■■□□□ 1.09
SPHK1-209ENST00000591762 RAB3GAP1Q15042 981 aa21.84■■□□□ 1.09
SPHK1-209ENST00000591762 CHRNA2Q15822 529 aa21.84■■□□□ 1.09
SPHK1-209ENST00000591762 NLRP2Q9NX02 1062 aa21.84■■□□□ 1.09
SPHK1-209ENST00000591762 ERBB3P21860 1342 aa21.84■■□□□ 1.09
SPHK1-209ENST00000591762 RNMTO43148 476 aaKnown RBP21.83■■□□□ 1.09
SPHK1-209ENST00000591762 SMARCA5O60264 1052 aaPredicted RBP21.83■■□□□ 1.09
SPHK1-209ENST00000591762 CIZ1Q9ULV3 898 aaPredicted RBP21.83■■□□□ 1.09
SPHK1-209ENST00000591762 MED1Q15648 1581 aaPredicted RBP21.83■■□□□ 1.08
SPHK1-209ENST00000591762 K7ELQ4 463 aaPredicted RBP21.82■■□□□ 1.08
SPHK1-209ENST00000591762 ANXA1P04083 346 aa21.82■■□□□ 1.08
SPHK1-209ENST00000591762 OTUD7AQ8TE49 926 aaPredicted RBP21.81■■□□□ 1.08
SPHK1-209ENST00000591762 NPHP3Q7Z494 1330 aa21.81■■□□□ 1.08
SPHK1-209ENST00000591762 GAS2L3Q86XJ1 694 aa21.81■■□□□ 1.08
SPHK1-209ENST00000591762 NAP1L5Q96NT1 182 aaPredicted RBP21.81■■□□□ 1.08
SPHK1-209ENST00000591762 RGPD5Q99666 1765 aa21.81■■□□□ 1.08
SPHK1-209ENST00000591762 PLEKHM2Q8IWE5 1019 aa21.8■■□□□ 1.08
SPHK1-209ENST00000591762 CHPF2Q9P2E5 772 aa21.8■■□□□ 1.08
SPHK1-209ENST00000591762 CSB-PGBD3P0DP91 1061 aa21.8■■□□□ 1.08
SPHK1-209ENST00000591762 CLCN1P35523 988 aa21.8■■□□□ 1.08
SPHK1-209ENST00000591762 GNAI2P04899 355 aa21.79■■□□□ 1.08
SPHK1-209ENST00000591762 SOS1Q07889 1333 aaPredicted RBP21.79■■□□□ 1.08
SPHK1-209ENST00000591762 ALS2Q96Q42 1657 aa21.79■■□□□ 1.08
SPHK1-209ENST00000591762 FAM208AQ9UK61 1670 aaKnown RBP21.78■■□□□ 1.08
SPHK1-209ENST00000591762 SSFA2P28290 1259 aa21.78■■□□□ 1.08
SPHK1-209ENST00000591762 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
SPHK1-209ENST00000591762 DCCP43146 1447 aa21.78■■□□□ 1.08
SPHK1-209ENST00000591762 NCAPD2Q15021 1401 aa21.78■■□□□ 1.08
SPHK1-209ENST00000591762 CDC45O75419 566 aa21.77■■□□□ 1.08
SPHK1-209ENST00000591762 GSPT1P15170 499 aaKnown RBP21.77■■□□□ 1.08
SPHK1-209ENST00000591762 PRAMEF22A3QJZ6 481 aa21.77■■□□□ 1.08
SPHK1-209ENST00000591762 KDM4FA0A1W2PPD8 638 aa21.76■■□□□ 1.07
SPHK1-209ENST00000591762 HMMRO75330 724 aa21.76■■□□□ 1.07
SPHK1-209ENST00000591762 ISY1Q9ULR0 285 aaKnown RBP21.76■■□□□ 1.07
SPHK1-209ENST00000591762 EXOC6BQ9Y2D4 811 aa21.75■■□□□ 1.07
SPHK1-209ENST00000591762 PNMA6EA0A0J9YXQ4 647 aa21.75■■□□□ 1.07
SPHK1-209ENST00000591762 GNAI3P08754 354 aa21.75■■□□□ 1.07
SPHK1-209ENST00000591762 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
SPHK1-209ENST00000591762 USP44Q9H0E7 712 aa21.75■■□□□ 1.07
SPHK1-209ENST00000591762 LRRFIP2Q9Y608 721 aaKnown RBP21.75■■□□□ 1.07
SPHK1-209ENST00000591762 LMO7Q8WWI1 1683 aa21.75■■□□□ 1.07
SPHK1-209ENST00000591762 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
SPHK1-209ENST00000591762 SPATA31A3Q5VYP0 1347 aa21.74■■□□□ 1.07
SPHK1-209ENST00000591762 ZMYND15Q9H091 742 aa21.74■■□□□ 1.07
SPHK1-209ENST00000591762 SKOR2Q2VWA4 1001 aaPredicted RBP21.74■■□□□ 1.07
SPHK1-209ENST00000591762 TNS3Q68CZ2 1445 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms