RNA–Protein interactions for RNA: ENST00000590962.1

SPRED3-207, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 5

Gene SPRED3, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-207ENST00000590962 SF3B2Q13435 895 aaKnown RBP12.99□□□□□ -0.33
SPRED3-207ENST00000590962 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
SPRED3-207ENST00000590962 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
SPRED3-207ENST00000590962 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
SPRED3-207ENST00000590962 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
SPRED3-207ENST00000590962 RIPK4P57078 832 aa12.98□□□□□ -0.33
SPRED3-207ENST00000590962 CABP4P57796 275 aa12.98□□□□□ -0.33
SPRED3-207ENST00000590962 EZH2Q15910 746 aaKnown RBP12.98□□□□□ -0.33
SPRED3-207ENST00000590962 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
SPRED3-207ENST00000590962 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
SPRED3-207ENST00000590962 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
SPRED3-207ENST00000590962 BAG6P46379 1132 aa12.97□□□□□ -0.33
SPRED3-207ENST00000590962 CAMKK2Q96RR4 588 aa12.97□□□□□ -0.33
SPRED3-207ENST00000590962 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
SPRED3-207ENST00000590962 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
SPRED3-207ENST00000590962 PLSCR1O15162 318 aa12.96□□□□□ -0.33
SPRED3-207ENST00000590962 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
SPRED3-207ENST00000590962 PROM2Q8N271 834 aa12.96□□□□□ -0.33
SPRED3-207ENST00000590962 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
SPRED3-207ENST00000590962 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
SPRED3-207ENST00000590962 C5P01031 1676 aa12.96□□□□□ -0.34
SPRED3-207ENST00000590962 PALLDQ8WX93 1383 aa12.95□□□□□ -0.34
SPRED3-207ENST00000590962 KCPQ6ZWJ8 1503 aa12.95□□□□□ -0.34
SPRED3-207ENST00000590962 KCNQ4P56696 695 aa12.95□□□□□ -0.34
SPRED3-207ENST00000590962 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
SPRED3-207ENST00000590962 TJP1Q07157 1748 aa12.95□□□□□ -0.34
SPRED3-207ENST00000590962 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
SPRED3-207ENST00000590962 COL5A3P25940 1745 aaPredicted RBP12.94□□□□□ -0.34
SPRED3-207ENST00000590962 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
SPRED3-207ENST00000590962 TEFQ10587 303 aa12.94□□□□□ -0.34
SPRED3-207ENST00000590962 TXNRD1Q16881 649 aa12.93□□□□□ -0.34
SPRED3-207ENST00000590962 LRRC4BQ9NT99 713 aa12.93□□□□□ -0.34
SPRED3-207ENST00000590962 CICQ96RK0 1608 aaPredicted RBP12.92□□□□□ -0.34
SPRED3-207ENST00000590962 KCNQ3O43525 872 aa12.92□□□□□ -0.34
SPRED3-207ENST00000590962 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
SPRED3-207ENST00000590962 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
SPRED3-207ENST00000590962 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
SPRED3-207ENST00000590962 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
SPRED3-207ENST00000590962 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
SPRED3-207ENST00000590962 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
SPRED3-207ENST00000590962 SMARCC1Q92922 1105 aaPredicted RBP12.91□□□□□ -0.34
SPRED3-207ENST00000590962 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
SPRED3-207ENST00000590962 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
SPRED3-207ENST00000590962 PTCD1O75127 700 aaKnown RBP12.9□□□□□ -0.34
SPRED3-207ENST00000590962 SIK1P57059 783 aa12.9□□□□□ -0.34
SPRED3-207ENST00000590962 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
SPRED3-207ENST00000590962 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
SPRED3-207ENST00000590962 CCNL1Q9UK58 526 aaPredicted RBP12.9□□□□□ -0.34
SPRED3-207ENST00000590962 ITPK1Q13572 414 aa12.89□□□□□ -0.35
SPRED3-207ENST00000590962 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
SPRED3-207ENST00000590962 WWC1Q8IX03 1113 aa12.89□□□□□ -0.35
SPRED3-207ENST00000590962 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
SPRED3-207ENST00000590962 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
SPRED3-207ENST00000590962 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
SPRED3-207ENST00000590962 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
SPRED3-207ENST00000590962 SLC27A3Q5K4L6 730 aa12.88□□□□□ -0.35
SPRED3-207ENST00000590962 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
SPRED3-207ENST00000590962 QSER1Q2KHR3 1735 aa12.88□□□□□ -0.35
SPRED3-207ENST00000590962 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
SPRED3-207ENST00000590962 ZNF827Q17R98 1081 aa12.87□□□□□ -0.35
SPRED3-207ENST00000590962 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
SPRED3-207ENST00000590962 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
SPRED3-207ENST00000590962 LAS1LQ9Y4W2 734 aaKnown RBP12.87□□□□□ -0.35
SPRED3-207ENST00000590962 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
SPRED3-207ENST00000590962 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
SPRED3-207ENST00000590962 CHL1O00533 1208 aa12.86□□□□□ -0.35
SPRED3-207ENST00000590962 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
SPRED3-207ENST00000590962 TSPYL4Q9UJ04 414 aa12.86□□□□□ -0.35
SPRED3-207ENST00000590962 ZNF521Q96K83 1311 aa12.86□□□□□ -0.35
SPRED3-207ENST00000590962 ZNF853P0CG23 659 aa12.85□□□□□ -0.35
SPRED3-207ENST00000590962 EIF4A1P60842 406 aaKnown RBP12.85□□□□□ -0.35
SPRED3-207ENST00000590962 DNAJC10Q8IXB1 793 aa12.85□□□□□ -0.35
SPRED3-207ENST00000590962 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
SPRED3-207ENST00000590962 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
SPRED3-207ENST00000590962 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
SPRED3-207ENST00000590962 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
SPRED3-207ENST00000590962 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
SPRED3-207ENST00000590962 MBIPQ9NS73 344 aa12.84□□□□□ -0.35
SPRED3-207ENST00000590962 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
SPRED3-207ENST00000590962 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
SPRED3-207ENST00000590962 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
SPRED3-207ENST00000590962 SMIM5Q71RC9 77 aa12.83□□□□□ -0.36
SPRED3-207ENST00000590962 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.36
SPRED3-207ENST00000590962 IFT57Q9NWB7 429 aa12.83□□□□□ -0.36
SPRED3-207ENST00000590962 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
SPRED3-207ENST00000590962 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
SPRED3-207ENST00000590962 CYP19A1P11511 503 aaPredicted RBP12.82□□□□□ -0.36
SPRED3-207ENST00000590962 GNAI1P63096 354 aa12.82□□□□□ -0.36
SPRED3-207ENST00000590962 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
SPRED3-207ENST00000590962 SLC15A2Q16348 729 aa12.82□□□□□ -0.36
SPRED3-207ENST00000590962 WDR63Q8IWG1 891 aa12.82□□□□□ -0.36
SPRED3-207ENST00000590962 TSR2Q969E8 191 aaKnown RBP12.82□□□□□ -0.36
SPRED3-207ENST00000590962 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
SPRED3-207ENST00000590962 IL16Q14005 1332 aa12.82□□□□□ -0.36
SPRED3-207ENST00000590962 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
SPRED3-207ENST00000590962 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPRED3-207ENST00000590962 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
SPRED3-207ENST00000590962 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
SPRED3-207ENST00000590962 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
SPRED3-207ENST00000590962 PDGFDQ9GZP0 370 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms