RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 RGPD1P0DJD0 1748 aa23.52■■□□□ 1.36
MBD3-207ENST00000590550 EID1Q9Y6B2 187 aa23.52■■□□□ 1.36
MBD3-207ENST00000590550 ARHGEF10O15013 1369 aa23.52■■□□□ 1.36
MBD3-207ENST00000590550 FLT4P35916 1363 aa23.52■■□□□ 1.36
MBD3-207ENST00000590550 FGD1P98174 961 aa23.52■■□□□ 1.35
MBD3-207ENST00000590550 FKBP5Q13451 457 aaPredicted RBP23.52■■□□□ 1.35
MBD3-207ENST00000590550 UQCRHLA0A096LP55 91 aa23.51■■□□□ 1.35
MBD3-207ENST00000590550 UQCRHP07919 91 aa23.51■■□□□ 1.35
MBD3-207ENST00000590550 ZGPATQ8N5A5 531 aaKnown RBP23.51■■□□□ 1.35
MBD3-207ENST00000590550 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
MBD3-207ENST00000590550 MAP7D2Q96T17 732 aa23.5■■□□□ 1.35
MBD3-207ENST00000590550 STK31Q9BXU1 1019 aa23.5■■□□□ 1.35
MBD3-207ENST00000590550 SBNO1A3KN83 1393 aa23.5■■□□□ 1.35
MBD3-207ENST00000590550 PNMA6EA0A0J9YXQ4 647 aa23.49■■□□□ 1.35
MBD3-207ENST00000590550 HMMRO75330 724 aa23.49■■□□□ 1.35
MBD3-207ENST00000590550 PDE1AP54750 535 aa23.49■■□□□ 1.35
MBD3-207ENST00000590550 XPCQ01831 940 aaPredicted RBP23.49■■□□□ 1.35
MBD3-207ENST00000590550 BAG4O95429 457 aaKnown RBP23.49■■□□□ 1.35
MBD3-207ENST00000590550 CASC1Q6TDU7 716 aa23.49■■□□□ 1.35
MBD3-207ENST00000590550 CHAMP1Q96JM3 812 aa23.49■■□□□ 1.35
MBD3-207ENST00000590550 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
MBD3-207ENST00000590550 FLIIQ13045 1269 aa23.48■■□□□ 1.35
MBD3-207ENST00000590550 IGSF1Q8N6C5 1336 aa23.48■■□□□ 1.35
MBD3-207ENST00000590550 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
MBD3-207ENST00000590550 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
MBD3-207ENST00000590550 C14orf37Q86TY3 774 aa23.48■■□□□ 1.35
MBD3-207ENST00000590550 PPP1R9BQ96SB3 815 aa23.48■■□□□ 1.35
MBD3-207ENST00000590550 KIF13AQ9H1H9 1805 aa23.48■■□□□ 1.35
MBD3-207ENST00000590550 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
MBD3-207ENST00000590550 GNAI2P04899 355 aa23.47■■□□□ 1.35
MBD3-207ENST00000590550 MCTP1Q6DN14 999 aa23.46■■□□□ 1.35
MBD3-207ENST00000590550 RBM33Q96EV2 1170 aaKnown RBP23.46■■□□□ 1.35
MBD3-207ENST00000590550 KDRP35968 1356 aa23.46■■□□□ 1.35
MBD3-207ENST00000590550 SMAP1Q8IYB5 467 aaPredicted RBP23.46■■□□□ 1.35
MBD3-207ENST00000590550 DDX49Q9Y6V7 483 aaKnown RBP23.46■■□□□ 1.35
MBD3-207ENST00000590550 IL17REQ8NFR9 667 aa23.45■■□□□ 1.34
MBD3-207ENST00000590550 FOXD4L5Q5VV16 416 aaPredicted RBP23.45■■□□□ 1.34
MBD3-207ENST00000590550 FOXD4L4Q8WXT5 416 aaPredicted RBP23.45■■□□□ 1.34
MBD3-207ENST00000590550 ERC2O15083 957 aa23.44■■□□□ 1.34
MBD3-207ENST00000590550 SKOR2Q2VWA4 1001 aaPredicted RBP23.44■■□□□ 1.34
MBD3-207ENST00000590550 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
MBD3-207ENST00000590550 NCLP19338 710 aaKnown RBP23.43■■□□□ 1.34
MBD3-207ENST00000590550 HOXC9P31274 260 aa23.43■■□□□ 1.34
MBD3-207ENST00000590550 LRRFIP2Q9Y608 721 aaKnown RBP23.43■■□□□ 1.34
MBD3-207ENST00000590550 REC8O95072 547 aa23.43■■□□□ 1.34
MBD3-207ENST00000590550 NOL8Q76FK4 1167 aaKnown RBP23.43■■□□□ 1.34
MBD3-207ENST00000590550 GOLGA6L22H0YM25 854 aa23.42■■□□□ 1.34
MBD3-207ENST00000590550 ABTB2Q8N961 1025 aa23.42■■□□□ 1.34
MBD3-207ENST00000590550 RILPL2Q969X0 211 aa23.42■■□□□ 1.34
MBD3-207ENST00000590550 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
MBD3-207ENST00000590550 ST18O60284 1047 aa23.41■■□□□ 1.34
MBD3-207ENST00000590550 KCNA6P17658 529 aa23.41■■□□□ 1.34
MBD3-207ENST00000590550 CCDC30Q5VVM6 783 aa23.41■■□□□ 1.34
MBD3-207ENST00000590550 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
MBD3-207ENST00000590550 TRIM6-TRIM34B2RNG4 842 aa23.41■■□□□ 1.34
MBD3-207ENST00000590550 TERF1P54274 439 aa23.41■■□□□ 1.34
MBD3-207ENST00000590550 LRRCC1Q9C099 1032 aa23.41■■□□□ 1.34
MBD3-207ENST00000590550 PHAXQ9H814 394 aaKnown RBP23.4■■□□□ 1.34
MBD3-207ENST00000590550 IL1RAPL2Q9NP60 686 aa23.4■■□□□ 1.34
MBD3-207ENST00000590550 NEK4P51957 841 aa23.4■■□□□ 1.34
MBD3-207ENST00000590550 TBX22Q9Y458 520 aa23.4■■□□□ 1.34
MBD3-207ENST00000590550 DIP2AQ14689 1571 aa23.4■■□□□ 1.34
MBD3-207ENST00000590550 MX1P20591 662 aa23.39■■□□□ 1.34
MBD3-207ENST00000590550 UNC5CLQ8IV45 518 aa23.39■■□□□ 1.34
MBD3-207ENST00000590550 PALD1Q9ULE6 856 aa23.39■■□□□ 1.34
MBD3-207ENST00000590550 PIK3C2AO00443 1686 aa23.39■■□□□ 1.33
MBD3-207ENST00000590550 OSBPL3Q9H4L5 887 aa23.38■■□□□ 1.33
MBD3-207ENST00000590550 EIF2S2P20042 333 aaKnown RBP23.38■■□□□ 1.33
MBD3-207ENST00000590550 CAVIN1Q6NZI2 390 aaKnown RBP23.37■■□□□ 1.33
MBD3-207ENST00000590550 ZDHHC9Q9Y397 364 aa23.37■■□□□ 1.33
MBD3-207ENST00000590550 CYP2E1P05181 493 aaPredicted RBP23.37■■□□□ 1.33
MBD3-207ENST00000590550 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
MBD3-207ENST00000590550 ANO2Q9NQ90 1003 aa23.37■■□□□ 1.33
MBD3-207ENST00000590550 MAP4K4O95819 1239 aaPredicted RBP23.36■■□□□ 1.33
MBD3-207ENST00000590550 GNAI3P08754 354 aa23.36■■□□□ 1.33
MBD3-207ENST00000590550 NUCB2P80303 420 aa23.36■■□□□ 1.33
MBD3-207ENST00000590550 ATP8B2P98198 1209 aa23.36■■□□□ 1.33
MBD3-207ENST00000590550 KLHL40Q2TBA0 621 aa23.36■■□□□ 1.33
MBD3-207ENST00000590550 CLEC17AQ6ZS10 378 aa23.36■■□□□ 1.33
MBD3-207ENST00000590550 SALL3Q9BXA9 1300 aa23.36■■□□□ 1.33
MBD3-207ENST00000590550 HDGFL1Q5TGJ6 251 aa23.35■■□□□ 1.33
MBD3-207ENST00000590550 ESYT1Q9BSJ8 1104 aa23.35■■□□□ 1.33
MBD3-207ENST00000590550 TAF7Q15545 349 aaPredicted RBP23.35■■□□□ 1.33
MBD3-207ENST00000590550 NUTM1Q86Y26 1132 aa23.35■■□□□ 1.33
MBD3-207ENST00000590550 MAP3K5Q99683 1374 aa23.35■■□□□ 1.33
MBD3-207ENST00000590550 PRPF40AO75400 957 aaKnown RBP23.35■■□□□ 1.33
MBD3-207ENST00000590550 IL25Q9H293 177 aa23.35■■□□□ 1.33
MBD3-207ENST00000590550 ANXA1P04083 346 aa23.34■■□□□ 1.33
MBD3-207ENST00000590550 LMBRD1Q9NUN5 540 aa23.34■■□□□ 1.33
MBD3-207ENST00000590550 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.34■■□□□ 1.33
MBD3-207ENST00000590550 SETD1BQ9UPS6 1966 aaKnown RBP23.33■■□□□ 1.33
MBD3-207ENST00000590550 PTMSP20962 102 aa23.33■■□□□ 1.33
MBD3-207ENST00000590550 UBTFL1P0CB47 393 aaPredicted RBP23.33■■□□□ 1.32
MBD3-207ENST00000590550 TMX3Q96JJ7 454 aa23.33■■□□□ 1.32
MBD3-207ENST00000590550 UPF3BQ9BZI7 483 aaKnown RBP23.33■■□□□ 1.32
MBD3-207ENST00000590550 RBM27Q9P2N5 1060 aaKnown RBP23.33■■□□□ 1.32
MBD3-207ENST00000590550 NOL7Q9UMY1 257 aaKnown RBP23.33■■□□□ 1.32
MBD3-207ENST00000590550 IBTKQ9P2D0 1353 aaPredicted RBP23.33■■□□□ 1.32
MBD3-207ENST00000590550 CHMLP26374 656 aa23.32■■□□□ 1.32
MBD3-207ENST00000590550 LGR6Q9HBX8 967 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms