RNA–Protein interactions for RNA: ENST00000590187.2

NCAN-204, Transcript of neurocan, humanhuman

TSL 1 (best)

Gene NCAN, Length 2,361 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-204ENST00000590187 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
NCAN-204ENST00000590187 RREB1Q92766 1687 aa20.44■□□□□ 0.86
NCAN-204ENST00000590187 PLSCR1O15162 318 aa20.43■□□□□ 0.86
NCAN-204ENST00000590187 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
NCAN-204ENST00000590187 ITGB4P16144 1822 aa20.43■□□□□ 0.86
NCAN-204ENST00000590187 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
NCAN-204ENST00000590187 NKX1-1Q15270 411 aaPredicted RBP20.43■□□□□ 0.86
NCAN-204ENST00000590187 NUP188Q5SRE5 1749 aa20.41■□□□□ 0.86
NCAN-204ENST00000590187 MTHFSDQ2M296 383 aaKnown RBP20.41■□□□□ 0.86
NCAN-204ENST00000590187 DCAF5Q96JK2 942 aa20.4■□□□□ 0.86
NCAN-204ENST00000590187 TMOD3Q9NYL9 352 aa20.4■□□□□ 0.86
NCAN-204ENST00000590187 AKAP4Q5JQC9 854 aa20.39■□□□□ 0.86
NCAN-204ENST00000590187 TXNRD1Q16881 649 aa20.39■□□□□ 0.85
NCAN-204ENST00000590187 FCHSD2O94868 740 aa20.38■□□□□ 0.85
NCAN-204ENST00000590187 KDM6AO15550 1401 aaPredicted RBP20.37■□□□□ 0.85
NCAN-204ENST00000590187 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
NCAN-204ENST00000590187 CABP4P57796 275 aa20.36■□□□□ 0.85
NCAN-204ENST00000590187 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
NCAN-204ENST00000590187 PIGBQ92521 554 aa20.36■□□□□ 0.85
NCAN-204ENST00000590187 FRAT1Q92837 279 aaPredicted RBP20.36■□□□□ 0.85
NCAN-204ENST00000590187 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
NCAN-204ENST00000590187 VIRMAQ69YN4 1812 aaKnown RBP20.35■□□□□ 0.85
NCAN-204ENST00000590187 SCN11AQ9UI33 1791 aa20.35■□□□□ 0.85
NCAN-204ENST00000590187 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.85
NCAN-204ENST00000590187 PROM2Q8N271 834 aa20.35■□□□□ 0.85
NCAN-204ENST00000590187 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
NCAN-204ENST00000590187 ERVV-2B6SEH9 535 aa20.35■□□□□ 0.85
NCAN-204ENST00000590187 RRP9O43818 475 aaKnown RBP20.34■□□□□ 0.85
NCAN-204ENST00000590187 LY75O60449 1722 aa20.33■□□□□ 0.85
NCAN-204ENST00000590187 R3HDM1Q15032 1099 aaKnown RBP20.33■□□□□ 0.85
NCAN-204ENST00000590187 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.85
NCAN-204ENST00000590187 PALLDQ8WX93 1383 aa20.33■□□□□ 0.85
NCAN-204ENST00000590187 MAP3K5Q99683 1374 aa20.33■□□□□ 0.85
NCAN-204ENST00000590187 HSP90AA2PQ14568 343 aaPredicted RBP20.32■□□□□ 0.84
NCAN-204ENST00000590187 SMARCC1Q92922 1105 aaPredicted RBP20.32■□□□□ 0.84
NCAN-204ENST00000590187 MAPK8IP3Q9UPT6 1336 aa20.32■□□□□ 0.84
NCAN-204ENST00000590187 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
NCAN-204ENST00000590187 KCNQ4P56696 695 aa20.32■□□□□ 0.84
NCAN-204ENST00000590187 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
NCAN-204ENST00000590187 LGR6Q9HBX8 967 aa20.32■□□□□ 0.84
NCAN-204ENST00000590187 CCNL1Q9UK58 526 aaPredicted RBP20.32■□□□□ 0.84
NCAN-204ENST00000590187 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
NCAN-204ENST00000590187 SLC27A3Q5K4L6 730 aa20.31■□□□□ 0.84
NCAN-204ENST00000590187 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
NCAN-204ENST00000590187 ASAP1Q9ULH1 1129 aa20.3■□□□□ 0.84
NCAN-204ENST00000590187 LRRC4BQ9NT99 713 aa20.29■□□□□ 0.84
NCAN-204ENST00000590187 STK32BQ9NY57 414 aa20.29■□□□□ 0.84
NCAN-204ENST00000590187 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
NCAN-204ENST00000590187 RBM10P98175 930 aaKnown RBP20.28■□□□□ 0.84
NCAN-204ENST00000590187 SLC52A2Q9HAB3 445 aa20.28■□□□□ 0.84
NCAN-204ENST00000590187 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
NCAN-204ENST00000590187 AAMPQ13685 434 aa20.27■□□□□ 0.84
NCAN-204ENST00000590187 PLEKHF1Q96S99 279 aa20.27■□□□□ 0.84
NCAN-204ENST00000590187 FGD1P98174 961 aa20.27■□□□□ 0.83
NCAN-204ENST00000590187 TEFQ10587 303 aa20.27■□□□□ 0.83
NCAN-204ENST00000590187 CCDC146Q8IYE0 955 aa20.27■□□□□ 0.83
NCAN-204ENST00000590187 FAM9BQ8IZU0 186 aa20.27■□□□□ 0.83
NCAN-204ENST00000590187 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.83
NCAN-204ENST00000590187 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
NCAN-204ENST00000590187 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
NCAN-204ENST00000590187 NFKBIBQ15653 356 aa20.26■□□□□ 0.83
NCAN-204ENST00000590187 C5P01031 1676 aa20.25■□□□□ 0.83
NCAN-204ENST00000590187 PAPPAQ13219 1627 aa20.25■□□□□ 0.83
NCAN-204ENST00000590187 MRC1P22897 1456 aa20.25■□□□□ 0.83
NCAN-204ENST00000590187 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
NCAN-204ENST00000590187 IL17REQ8NFR9 667 aa20.24■□□□□ 0.83
NCAN-204ENST00000590187 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
NCAN-204ENST00000590187 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
NCAN-204ENST00000590187 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
NCAN-204ENST00000590187 LOC102724428A0A0B4J2F2 783 aa20.24■□□□□ 0.83
NCAN-204ENST00000590187 A0A0U1RQG5 324 aaPredicted RBP20.24■□□□□ 0.83
NCAN-204ENST00000590187 SIK1P57059 783 aa20.24■□□□□ 0.83
NCAN-204ENST00000590187 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
NCAN-204ENST00000590187 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
NCAN-204ENST00000590187 MCM10Q7L590 875 aa20.23■□□□□ 0.83
NCAN-204ENST00000590187 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
NCAN-204ENST00000590187 PTCD1O75127 700 aaKnown RBP20.22■□□□□ 0.83
NCAN-204ENST00000590187 DCTN1Q14203 1278 aa20.22■□□□□ 0.83
NCAN-204ENST00000590187 TAF1LQ8IZX4 1826 aa20.22■□□□□ 0.83
NCAN-204ENST00000590187 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
NCAN-204ENST00000590187 SLC39A6Q13433 755 aa20.21■□□□□ 0.83
NCAN-204ENST00000590187 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
NCAN-204ENST00000590187 RRAGDQ9NQL2 400 aaPredicted RBP20.2■□□□□ 0.82
NCAN-204ENST00000590187 TFCP2L1Q9NZI6 479 aa20.2■□□□□ 0.82
NCAN-204ENST00000590187 HTATSF1O43719 755 aaKnown RBP20.2■□□□□ 0.82
NCAN-204ENST00000590187 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
NCAN-204ENST00000590187 TTC5Q8N0Z6 440 aa20.2■□□□□ 0.82
NCAN-204ENST00000590187 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
NCAN-204ENST00000590187 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
NCAN-204ENST00000590187 HMGB2P26583 209 aaKnown RBP20.19■□□□□ 0.82
NCAN-204ENST00000590187 RRP7AQ9Y3A4 280 aaKnown RBP20.19■□□□□ 0.82
NCAN-204ENST00000590187 HSP90AA1P07900 732 aaKnown RBP20.19■□□□□ 0.82
NCAN-204ENST00000590187 RIPK4P57078 832 aa20.19■□□□□ 0.82
NCAN-204ENST00000590187 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
NCAN-204ENST00000590187 C4BP0C0L5 1744 aa20.18■□□□□ 0.82
NCAN-204ENST00000590187 ITPK1Q13572 414 aa20.17■□□□□ 0.82
NCAN-204ENST00000590187 AK7Q96M32 723 aa20.17■□□□□ 0.82
NCAN-204ENST00000590187 TUBGCP6Q96RT7 1819 aa20.17■□□□□ 0.82
NCAN-204ENST00000590187 BTBD11A6QL63 1104 aa20.17■□□□□ 0.82
NCAN-204ENST00000590187 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms