RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SLC52A2Q9HAB3 445 aa25■■□□□ 1.59
CLPTM1-209ENST00000588855 NFATC2IPQ8NCF5 419 aa24.99■■□□□ 1.59
CLPTM1-209ENST00000588855 PAPPAQ13219 1627 aa24.99■■□□□ 1.59
CLPTM1-209ENST00000588855 DEFB132Q7Z7B7 95 aa24.98■■□□□ 1.59
CLPTM1-209ENST00000588855 THUMPD2Q9BTF0 503 aaKnown RBP24.97■■□□□ 1.59
CLPTM1-209ENST00000588855 TRIM35Q9UPQ4 493 aa24.97■■□□□ 1.59
CLPTM1-209ENST00000588855 LY75O60449 1722 aa24.97■■□□□ 1.59
CLPTM1-209ENST00000588855 LMOD3Q0VAK6 560 aa24.96■■□□□ 1.59
CLPTM1-209ENST00000588855 TEFQ10587 303 aa24.96■■□□□ 1.59
CLPTM1-209ENST00000588855 BAG6P46379 1132 aa24.96■■□□□ 1.59
CLPTM1-209ENST00000588855 RREB1Q92766 1687 aa24.94■■□□□ 1.58
CLPTM1-209ENST00000588855 EN1Q05925 392 aaPredicted RBP24.94■■□□□ 1.58
CLPTM1-209ENST00000588855 ASAP1Q9ULH1 1129 aa24.93■■□□□ 1.58
CLPTM1-209ENST00000588855 PALLDQ8WX93 1383 aa24.92■■□□□ 1.58
CLPTM1-209ENST00000588855 PLSCR1O15162 318 aa24.92■■□□□ 1.58
CLPTM1-209ENST00000588855 ATG3Q9NT62 314 aa24.92■■□□□ 1.58
CLPTM1-209ENST00000588855 UBR2Q8IWV8 1755 aa24.92■■□□□ 1.58
CLPTM1-209ENST00000588855 EZH2Q15910 746 aaKnown RBP24.91■■□□□ 1.58
CLPTM1-209ENST00000588855 CAMKK2Q96RR4 588 aa24.91■■□□□ 1.58
CLPTM1-209ENST00000588855 KDM3BQ7LBC6 1761 aa24.9■■□□□ 1.58
CLPTM1-209ENST00000588855 SALL2Q9Y467 1007 aaPredicted RBP24.9■■□□□ 1.58
CLPTM1-209ENST00000588855 NUP188Q5SRE5 1749 aa24.9■■□□□ 1.58
CLPTM1-209ENST00000588855 SLC39A6Q13433 755 aa24.89■■□□□ 1.57
CLPTM1-209ENST00000588855 SMARCC1Q92922 1105 aaPredicted RBP24.89■■□□□ 1.57
CLPTM1-209ENST00000588855 KCPQ6ZWJ8 1503 aa24.88■■□□□ 1.57
CLPTM1-209ENST00000588855 BTBD11A6QL63 1104 aa24.86■■□□□ 1.57
CLPTM1-209ENST00000588855 TAF7Q15545 349 aaPredicted RBP24.86■■□□□ 1.57
CLPTM1-209ENST00000588855 TXNRD1Q16881 649 aa24.86■■□□□ 1.57
CLPTM1-209ENST00000588855 CCDC27Q2M243 656 aa24.86■■□□□ 1.57
CLPTM1-209ENST00000588855 PROM2Q8N271 834 aa24.86■■□□□ 1.57
CLPTM1-209ENST00000588855 NCBP3Q53F19 620 aaKnown RBP24.86■■□□□ 1.57
CLPTM1-209ENST00000588855 TAF1LQ8IZX4 1826 aa24.85■■□□□ 1.57
CLPTM1-209ENST00000588855 WWC1Q8IX03 1113 aa24.85■■□□□ 1.57
CLPTM1-209ENST00000588855 MIS18AQ9NYP9 233 aa24.85■■□□□ 1.57
CLPTM1-209ENST00000588855 ZNF831Q5JPB2 1677 aa24.85■■□□□ 1.57
CLPTM1-209ENST00000588855 C5P01031 1676 aa24.83■■□□□ 1.57
CLPTM1-209ENST00000588855 KCNQ3O43525 872 aa24.83■■□□□ 1.57
CLPTM1-209ENST00000588855 PTCD1O75127 700 aaKnown RBP24.83■■□□□ 1.57
CLPTM1-209ENST00000588855 KCNQ4P56696 695 aa24.83■■□□□ 1.57
CLPTM1-209ENST00000588855 ZNF790Q6PG37 636 aa24.83■■□□□ 1.57
CLPTM1-209ENST00000588855 TJP1Q07157 1748 aa24.83■■□□□ 1.57
CLPTM1-209ENST00000588855 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
CLPTM1-209ENST00000588855 SIK1P57059 783 aa24.82■■□□□ 1.56
CLPTM1-209ENST00000588855 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
CLPTM1-209ENST00000588855 RBM42Q9BTD8 480 aaKnown RBP24.82■■□□□ 1.56
CLPTM1-209ENST00000588855 LRRC4BQ9NT99 713 aa24.82■■□□□ 1.56
CLPTM1-209ENST00000588855 CCNL1Q9UK58 526 aaPredicted RBP24.82■■□□□ 1.56
CLPTM1-209ENST00000588855 CICQ96RK0 1608 aaPredicted RBP24.82■■□□□ 1.56
CLPTM1-209ENST00000588855 SLC4A9Q96Q91 983 aa24.81■■□□□ 1.56
CLPTM1-209ENST00000588855 SLC27A3Q5K4L6 730 aa24.81■■□□□ 1.56
CLPTM1-209ENST00000588855 NGEFQ8N5V2 710 aa24.81■■□□□ 1.56
CLPTM1-209ENST00000588855 COL5A3P25940 1745 aaPredicted RBP24.8■■□□□ 1.56
CLPTM1-209ENST00000588855 TSPYL4Q9UJ04 414 aa24.8■■□□□ 1.56
CLPTM1-209ENST00000588855 LAS1LQ9Y4W2 734 aaKnown RBP24.8■■□□□ 1.56
CLPTM1-209ENST00000588855 CALD1Q05682 793 aaKnown RBP24.79■■□□□ 1.56
CLPTM1-209ENST00000588855 ZNF496Q96IT1 587 aaPredicted RBP24.78■■□□□ 1.56
CLPTM1-209ENST00000588855 ATP6V1AP38606 617 aa24.77■■□□□ 1.56
CLPTM1-209ENST00000588855 CFAP44Q96MT7 982 aa24.77■■□□□ 1.56
CLPTM1-209ENST00000588855 CHL1O00533 1208 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 ITPK1Q13572 414 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 BABAM1Q9NWV8 329 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 ZNF521Q96K83 1311 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 C4BP0C0L5 1744 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 ZNF853P0CG23 659 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 FMNL2Q96PY5 1086 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 IFT57Q9NWB7 429 aa24.76■■□□□ 1.55
CLPTM1-209ENST00000588855 HEG1Q9ULI3 1381 aa24.75■■□□□ 1.55
CLPTM1-209ENST00000588855 GNAI1P63096 354 aa24.75■■□□□ 1.55
CLPTM1-209ENST00000588855 WDR63Q8IWG1 891 aa24.75■■□□□ 1.55
CLPTM1-209ENST00000588855 HNRNPUQ00839 825 aaKnown RBP eCLIP24.74■■□□□ 1.55
CLPTM1-209ENST00000588855 MBIPQ9NS73 344 aa24.74■■□□□ 1.55
CLPTM1-209ENST00000588855 TUBGCP6Q96RT7 1819 aa24.73■■□□□ 1.55
CLPTM1-209ENST00000588855 LAMB4A4D0S4 1761 aa24.73■■□□□ 1.55
CLPTM1-209ENST00000588855 EIF4A1P60842 406 aaKnown RBP24.73■■□□□ 1.55
CLPTM1-209ENST00000588855 IL16Q14005 1332 aa24.73■■□□□ 1.55
CLPTM1-209ENST00000588855 LINC00116Q8NCU8 138 aa24.73■■□□□ 1.55
CLPTM1-209ENST00000588855 DNAJC10Q8IXB1 793 aa24.72■■□□□ 1.55
CLPTM1-209ENST00000588855 VSIG10Q8N0Z9 540 aa24.72■■□□□ 1.55
CLPTM1-209ENST00000588855 ANO8Q9HCE9 1232 aaPredicted RBP24.72■■□□□ 1.55
CLPTM1-209ENST00000588855 MYH14Q7Z406 1995 aaKnown RBP24.71■■□□□ 1.55
CLPTM1-209ENST00000588855 SPINK5Q9NQ38 1064 aaPredicted RBP24.71■■□□□ 1.55
CLPTM1-209ENST00000588855 PRAMEF22A3QJZ6 481 aa24.7■■□□□ 1.54
CLPTM1-209ENST00000588855 ZNF827Q17R98 1081 aa24.7■■□□□ 1.54
CLPTM1-209ENST00000588855 TSR2Q969E8 191 aaKnown RBP24.7■■□□□ 1.54
CLPTM1-209ENST00000588855 UBR3Q6ZT12 1888 aa24.68■■□□□ 1.54
CLPTM1-209ENST00000588855 KRT24Q2M2I5 525 aa24.67■■□□□ 1.54
CLPTM1-209ENST00000588855 AKT1S1Q96B36 256 aa24.67■■□□□ 1.54
CLPTM1-209ENST00000588855 FANCIQ9NVI1 1328 aa24.67■■□□□ 1.54
CLPTM1-209ENST00000588855 GIGYF1O75420 1035 aaPredicted RBP24.66■■□□□ 1.54
CLPTM1-209ENST00000588855 SNRPA1P09661 255 aaKnown RBP24.66■■□□□ 1.54
CLPTM1-209ENST00000588855 QSER1Q2KHR3 1735 aa24.66■■□□□ 1.54
CLPTM1-209ENST00000588855 CYP19A1P11511 503 aaPredicted RBP24.66■■□□□ 1.54
CLPTM1-209ENST00000588855 NBPF14Q5TI25 921 aa24.66■■□□□ 1.54
CLPTM1-209ENST00000588855 STK32BQ9NY57 414 aa24.66■■□□□ 1.54
CLPTM1-209ENST00000588855 CNTNAP4Q9C0A0 1308 aa24.65■■□□□ 1.54
CLPTM1-209ENST00000588855 GOLGA2Q08379 1002 aa24.65■■□□□ 1.54
CLPTM1-209ENST00000588855 SLC15A2Q16348 729 aa24.65■■□□□ 1.54
CLPTM1-209ENST00000588855 USP16Q9Y5T5 823 aa24.65■■□□□ 1.54
CLPTM1-209ENST00000588855 CRKLP46109 303 aaKnown RBP24.64■■□□□ 1.53
CLPTM1-209ENST00000588855 AK7Q96M32 723 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms