RNA–Protein interactions for RNA: ENST00000588199.5

AFMID-207, Transcript of arylformamidase, human

TSL 5

Gene AFMID, Length 778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFMID-207	ENST00000588199	SLC39A6	Q13433	755 aa		14.63	□□□□□ -0.07
AFMID-207	ENST00000588199	PNN	Q9H307	717 aa	Known RBP	14.63	□□□□□ -0.07
AFMID-207	ENST00000588199	SLC52A2	Q9HAB3	445 aa		14.63	□□□□□ -0.07
AFMID-207	ENST00000588199	ATG3	Q9NT62	314 aa		14.63	□□□□□ -0.07
AFMID-207	ENST00000588199	ADAMTS7	Q9UKP4	1686 aa		14.62	□□□□□ -0.07
AFMID-207	ENST00000588199	PLSCR1	O15162	318 aa		14.62	□□□□□ -0.07
AFMID-207	ENST00000588199	NEFM	P07197	916 aa		14.62	□□□□□ -0.07
AFMID-207	ENST00000588199	LRRC4B	Q9NT99	713 aa		14.62	□□□□□ -0.07
AFMID-207	ENST00000588199	TRIM35	Q9UPQ4	493 aa		14.62	□□□□□ -0.07
AFMID-207	ENST00000588199	KCNQ3	O43525	872 aa		14.61	□□□□□ -0.07
AFMID-207	ENST00000588199	TXNRD1	Q16881	649 aa		14.61	□□□□□ -0.07
AFMID-207	ENST00000588199	MIS18A	Q9NYP9	233 aa		14.61	□□□□□ -0.07
AFMID-207	ENST00000588199	CEMIP	Q8WUJ3	1361 aa		14.6	□□□□□ -0.07
AFMID-207	ENST00000588199	RTF1	Q92541	710 aa	Known RBP	14.6	□□□□□ -0.07
AFMID-207	ENST00000588199	SLC4A9	Q96Q91	983 aa		14.6	□□□□□ -0.07
AFMID-207	ENST00000588199	SALL2	Q9Y467	1007 aa	Predicted RBP	14.6	□□□□□ -0.07
AFMID-207	ENST00000588199	PALLD	Q8WX93	1383 aa		14.6	□□□□□ -0.07
AFMID-207	ENST00000588199	MRC1	P22897	1456 aa		14.59	□□□□□ -0.07
AFMID-207	ENST00000588199	HTATSF1	O43719	755 aa	Known RBP	14.58	□□□□□ -0.08
AFMID-207	ENST00000588199	PTCD1	O75127	700 aa	Known RBP	14.58	□□□□□ -0.08
AFMID-207	ENST00000588199	TEF	Q10587	303 aa		14.58	□□□□□ -0.08
AFMID-207	ENST00000588199	RBM42	Q9BTD8	480 aa	Known RBP	14.57	□□□□□ -0.08
AFMID-207	ENST00000588199	ANO8	Q9HCE9	1232 aa	Predicted RBP	14.57	□□□□□ -0.08
AFMID-207	ENST00000588199	CCNL1	Q9UK58	526 aa	Predicted RBP	14.57	□□□□□ -0.08
AFMID-207	ENST00000588199	RREB1	Q92766	1687 aa		14.56	□□□□□ -0.08
AFMID-207	ENST00000588199	LY75	O60449	1722 aa		14.56	□□□□□ -0.08
AFMID-207	ENST00000588199	SIPA1L3	O60292	1781 aa	Predicted RBP	14.56	□□□□□ -0.08
AFMID-207	ENST00000588199	ITPK1	Q13572	414 aa		14.56	□□□□□ -0.08
AFMID-207	ENST00000588199	SMIM5	Q71RC9	77 aa		14.56	□□□□□ -0.08
AFMID-207	ENST00000588199	LOC102724428	A0A0B4J2F2	783 aa		14.55	□□□□□ -0.08
AFMID-207	ENST00000588199	BTBD11	A6QL63	1104 aa		14.55	□□□□□ -0.08
AFMID-207	ENST00000588199	SIK1	P57059	783 aa		14.55	□□□□□ -0.08
AFMID-207	ENST00000588199	SMARCC1	Q92922	1105 aa	Predicted RBP	14.55	□□□□□ -0.08
AFMID-207	ENST00000588199	NUP188	Q5SRE5	1749 aa		14.55	□□□□□ -0.08
AFMID-207	ENST00000588199	PSD	A5PKW4	1024 aa	Predicted RBP	14.54	□□□□□ -0.08
AFMID-207	ENST00000588199	TAF7	Q15545	349 aa	Predicted RBP	14.54	□□□□□ -0.08
AFMID-207	ENST00000588199	ZNF827	Q17R98	1081 aa		14.54	□□□□□ -0.08
AFMID-207	ENST00000588199	RGPD3	A6NKT7	1758 aa	Predicted RBP	14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	RGPD4	Q7Z3J3	1758 aa		14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	KCP	Q6ZWJ8	1503 aa		14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	PRAMEF22	A3QJZ6	481 aa		14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	CENPB	P07199	599 aa	Predicted RBP	14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	ATP6V1A	P38606	617 aa		14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	ZNF790	Q6PG37	636 aa		14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	NGEF	Q8N5V2	710 aa		14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	LINC00116	Q8NCU8	138 aa		14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	ZNF496	Q96IT1	587 aa	Predicted RBP	14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	LAS1L	Q9Y4W2	734 aa	Known RBP	14.53	□□□□□ -0.08
AFMID-207	ENST00000588199	PAPPA	Q13219	1627 aa		14.52	□□□□□ -0.08
AFMID-207	ENST00000588199	R3HDM1	Q15032	1099 aa	Known RBP	14.52	□□□□□ -0.09
AFMID-207	ENST00000588199	SLC27A3	Q5K4L6	730 aa		14.52	□□□□□ -0.09
AFMID-207	ENST00000588199	AMIGO3	Q86WK7	504 aa		14.52	□□□□□ -0.09
AFMID-207	ENST00000588199	PDGFD	Q9GZP0	370 aa	Predicted RBP	14.52	□□□□□ -0.09
AFMID-207	ENST00000588199	LMOD3	Q0VAK6	560 aa		14.51	□□□□□ -0.09
AFMID-207	ENST00000588199	WWC1	Q8IX03	1113 aa		14.51	□□□□□ -0.09
AFMID-207	ENST00000588199	DNAJC10	Q8IXB1	793 aa		14.51	□□□□□ -0.09
AFMID-207	ENST00000588199	KRT24	Q2M2I5	525 aa		14.5	□□□□□ -0.09
AFMID-207	ENST00000588199	TTC5	Q8N0Z6	440 aa		14.5	□□□□□ -0.09
AFMID-207	ENST00000588199	AKT1S1	Q96B36	256 aa		14.5	□□□□□ -0.09
AFMID-207	ENST00000588199	TSPYL4	Q9UJ04	414 aa		14.49	□□□□□ -0.09
AFMID-207	ENST00000588199	TAF1L	Q8IZX4	1826 aa		14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	UBR2	Q8IWV8	1755 aa		14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	CHL1	O00533	1208 aa		14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	EIF4A1	P60842	406 aa	Known RBP	14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	SLC15A2	Q16348	729 aa		14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	YTHDC1	Q96MU7	727 aa	Known RBP	14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	TJP1	Q07157	1748 aa		14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	C5	P01031	1676 aa		14.48	□□□□□ -0.09
AFMID-207	ENST00000588199	KDM3B	Q7LBC6	1761 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	ZNF853	P0CG23	659 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	CCDC27	Q2M243	656 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	NBPF14	Q5TI25	921 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	MBIP	Q9NS73	344 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	STK32B	Q9NY57	414 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	USP16	Q9Y5T5	823 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	HEG1	Q9ULI3	1381 aa		14.47	□□□□□ -0.09
AFMID-207	ENST00000588199	CYP19A1	P11511	503 aa	Predicted RBP	14.46	□□□□□ -0.09
AFMID-207	ENST00000588199	PIP4K2A	P48426	406 aa	Predicted RBP	14.46	□□□□□ -0.09
AFMID-207	ENST00000588199	HNRNPU	Q00839	825 aa	Known RBP eCLIP	14.46	□□□□□ -0.09
AFMID-207	ENST00000588199	INTS5	Q6P9B9	1019 aa	Known RBP	14.46	□□□□□ -0.09
AFMID-207	ENST00000588199	TSR2	Q969E8	191 aa	Known RBP	14.46	□□□□□ -0.09
AFMID-207	ENST00000588199	FMNL2	Q96PY5	1086 aa		14.46	□□□□□ -0.09
AFMID-207	ENST00000588199	C4B	P0C0L5	1744 aa		14.46	□□□□□ -0.1
AFMID-207	ENST00000588199	MYH14	Q7Z406	1995 aa	Known RBP	14.45	□□□□□ -0.1
AFMID-207	ENST00000588199	PHF14	O94880	888 aa		14.45	□□□□□ -0.1
AFMID-207	ENST00000588199	A1BG	P04217	495 aa		14.45	□□□□□ -0.1
AFMID-207	ENST00000588199	CRKL	P46109	303 aa	Known RBP	14.45	□□□□□ -0.1
AFMID-207	ENST00000588199	NCBP3	Q53F19	620 aa	Known RBP	14.45	□□□□□ -0.1
AFMID-207	ENST00000588199	CFAP44	Q96MT7	982 aa		14.45	□□□□□ -0.1
AFMID-207	ENST00000588199	TFCP2L1	Q9NZI6	479 aa		14.45	□□□□□ -0.1
AFMID-207	ENST00000588199	ZNF521	Q96K83	1311 aa		14.44	□□□□□ -0.1
AFMID-207	ENST00000588199	COL5A3	P25940	1745 aa	Predicted RBP	14.44	□□□□□ -0.1
AFMID-207	ENST00000588199	TUBGCP6	Q96RT7	1819 aa		14.44	□□□□□ -0.1
AFMID-207	ENST00000588199	GNPAT	O15228	680 aa		14.44	□□□□□ -0.1
AFMID-207	ENST00000588199	COL23A1	Q86Y22	540 aa	Predicted RBP	14.44	□□□□□ -0.1
AFMID-207	ENST00000588199	VSIG10	Q8N0Z9	540 aa		14.44	□□□□□ -0.1
AFMID-207	ENST00000588199	IFT57	Q9NWB7	429 aa		14.44	□□□□□ -0.1
AFMID-207	ENST00000588199	PNPLA7	Q6ZV29	1317 aa		14.43	□□□□□ -0.1
AFMID-207	ENST00000588199	GIGYF1	O75420	1035 aa	Predicted RBP	14.43	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms