RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 BCAR3O75815 825 aa23.84■■□□□ 1.41
RETREG3-205ENST00000586870 CT47B1P0C2W7 299 aaPredicted RBP23.84■■□□□ 1.41
RETREG3-205ENST00000586870 PTF1AQ7RTS3 328 aa23.84■■□□□ 1.41
RETREG3-205ENST00000586870 NKX1-1Q15270 411 aaPredicted RBP23.82■■□□□ 1.4
RETREG3-205ENST00000586870 RGPD1P0DJD0 1748 aa23.82■■□□□ 1.4
RETREG3-205ENST00000586870 MTHFSDQ2M296 383 aaKnown RBP23.81■■□□□ 1.4
RETREG3-205ENST00000586870 PDE3AQ14432 1141 aa23.81■■□□□ 1.4
RETREG3-205ENST00000586870 AKAP4Q5JQC9 854 aa23.81■■□□□ 1.4
RETREG3-205ENST00000586870 MPRIPQ6WCQ1 1025 aa23.81■■□□□ 1.4
RETREG3-205ENST00000586870 GAS2L2Q8NHY3 880 aa23.81■■□□□ 1.4
RETREG3-205ENST00000586870 DCAF5Q96JK2 942 aa23.81■■□□□ 1.4
RETREG3-205ENST00000586870 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
RETREG3-205ENST00000586870 NFE2L2Q16236 605 aa23.8■■□□□ 1.4
RETREG3-205ENST00000586870 EZH2Q15910 746 aaKnown RBP23.78■■□□□ 1.4
RETREG3-205ENST00000586870 RBM19Q9Y4C8 960 aaKnown RBP23.78■■□□□ 1.4
RETREG3-205ENST00000586870 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
RETREG3-205ENST00000586870 PLSCR1O15162 318 aa23.77■■□□□ 1.4
RETREG3-205ENST00000586870 PHACTR3Q96KR7 559 aa23.77■■□□□ 1.4
RETREG3-205ENST00000586870 TMOD3Q9NYL9 352 aa23.77■■□□□ 1.4
RETREG3-205ENST00000586870 CAMKK2Q96RR4 588 aa23.77■■□□□ 1.4
RETREG3-205ENST00000586870 PKD1L3Q7Z443 1732 aa23.76■■□□□ 1.39
RETREG3-205ENST00000586870 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
RETREG3-205ENST00000586870 CABP4P57796 275 aa23.75■■□□□ 1.39
RETREG3-205ENST00000586870 ERVV-2B6SEH9 535 aa23.74■■□□□ 1.39
RETREG3-205ENST00000586870 GNAT3A8MTJ3 354 aa23.73■■□□□ 1.39
RETREG3-205ENST00000586870 CANXP27824 592 aaKnown RBP23.73■■□□□ 1.39
RETREG3-205ENST00000586870 LMOD3Q0VAK6 560 aa23.73■■□□□ 1.39
RETREG3-205ENST00000586870 SHANK3Q9BYB0 1731 aa23.73■■□□□ 1.39
RETREG3-205ENST00000586870 EXOSC9Q06265 439 aaKnown RBP23.72■■□□□ 1.39
RETREG3-205ENST00000586870 PIGBQ92521 554 aa23.72■■□□□ 1.39
RETREG3-205ENST00000586870 TSR2Q969E8 191 aaKnown RBP23.72■■□□□ 1.39
RETREG3-205ENST00000586870 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
RETREG3-205ENST00000586870 RNMTO43148 476 aaKnown RBP23.7■■□□□ 1.38
RETREG3-205ENST00000586870 TXNRD1Q16881 649 aa23.7■■□□□ 1.38
RETREG3-205ENST00000586870 SMARCC1Q92922 1105 aaPredicted RBP23.7■■□□□ 1.38
RETREG3-205ENST00000586870 LGR6Q9HBX8 967 aa23.7■■□□□ 1.38
RETREG3-205ENST00000586870 MAP3K5Q99683 1374 aa23.69■■□□□ 1.38
RETREG3-205ENST00000586870 NBPF14Q5TI25 921 aa23.69■■□□□ 1.38
RETREG3-205ENST00000586870 NFATC2IPQ8NCF5 419 aa23.69■■□□□ 1.38
RETREG3-205ENST00000586870 NHSQ6T4R5 1651 aa23.69■■□□□ 1.38
RETREG3-205ENST00000586870 KAT6BQ8WYB5 2073 aa23.69■■□□□ 1.38
RETREG3-205ENST00000586870 AAMPQ13685 434 aa23.68■■□□□ 1.38
RETREG3-205ENST00000586870 TNS1Q9HBL0 1735 aaKnown RBP23.68■■□□□ 1.38
RETREG3-205ENST00000586870 SBF2Q86WG5 1849 aa23.67■■□□□ 1.38
RETREG3-205ENST00000586870 FRAT1Q92837 279 aaPredicted RBP23.67■■□□□ 1.38
RETREG3-205ENST00000586870 KDM6AO15550 1401 aaPredicted RBP23.67■■□□□ 1.38
RETREG3-205ENST00000586870 TEFQ10587 303 aa23.66■■□□□ 1.38
RETREG3-205ENST00000586870 CENPQQ7L2Z9 268 aaPredicted RBP23.66■■□□□ 1.38
RETREG3-205ENST00000586870 DOT1LQ8TEK3 1739 aa23.66■■□□□ 1.38
RETREG3-205ENST00000586870 TCERG1O14776 1098 aaKnown RBP23.66■■□□□ 1.38
RETREG3-205ENST00000586870 MS4A1P11836 297 aa23.66■■□□□ 1.38
RETREG3-205ENST00000586870 GNAI1P63096 354 aa23.66■■□□□ 1.38
RETREG3-205ENST00000586870 IFT57Q9NWB7 429 aa23.66■■□□□ 1.38
RETREG3-205ENST00000586870 KDM2BQ8NHM5 1336 aa23.65■■□□□ 1.38
RETREG3-205ENST00000586870 PROM2Q8N271 834 aa23.65■■□□□ 1.38
RETREG3-205ENST00000586870 SLC52A2Q9HAB3 445 aa23.65■■□□□ 1.38
RETREG3-205ENST00000586870 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
RETREG3-205ENST00000586870 SLC27A3Q5K4L6 730 aa23.64■■□□□ 1.38
RETREG3-205ENST00000586870 ZNF428Q96B54 188 aa23.64■■□□□ 1.38
RETREG3-205ENST00000586870 ASAP1Q9ULH1 1129 aa23.64■■□□□ 1.38
RETREG3-205ENST00000586870 IL17REQ8NFR9 667 aa23.63■■□□□ 1.37
RETREG3-205ENST00000586870 CCNL1Q9UK58 526 aaPredicted RBP23.63■■□□□ 1.37
RETREG3-205ENST00000586870 PALLDQ8WX93 1383 aa23.63■■□□□ 1.37
RETREG3-205ENST00000586870 HTATSF1O43719 755 aaKnown RBP23.62■■□□□ 1.37
RETREG3-205ENST00000586870 ZNF853P0CG23 659 aa23.62■■□□□ 1.37
RETREG3-205ENST00000586870 ZKSCAN2Q63HK3 967 aa23.62■■□□□ 1.37
RETREG3-205ENST00000586870 PANK1Q8TE04 598 aa23.62■■□□□ 1.37
RETREG3-205ENST00000586870 ATG3Q9NT62 314 aa23.62■■□□□ 1.37
RETREG3-205ENST00000586870 HMGB2P26583 209 aaKnown RBP23.61■■□□□ 1.37
RETREG3-205ENST00000586870 ALDH1L2Q3SY69 923 aa23.61■■□□□ 1.37
RETREG3-205ENST00000586870 MCM10Q7L590 875 aa23.61■■□□□ 1.37
RETREG3-205ENST00000586870 RBM42Q9BTD8 480 aaKnown RBP23.61■■□□□ 1.37
RETREG3-205ENST00000586870 BCL2L13Q9BXK5 485 aa23.61■■□□□ 1.37
RETREG3-205ENST00000586870 SMC4Q9NTJ3 1288 aa23.61■■□□□ 1.37
RETREG3-205ENST00000586870 COG6Q9Y2V7 657 aa23.61■■□□□ 1.37
RETREG3-205ENST00000586870 KCNQ4P56696 695 aa23.6■■□□□ 1.37
RETREG3-205ENST00000586870 DCTN1Q14203 1278 aa23.59■■□□□ 1.37
RETREG3-205ENST00000586870 SSH1Q8WYL5 1049 aa23.59■■□□□ 1.37
RETREG3-205ENST00000586870 BTAF1O14981 1849 aa23.59■■□□□ 1.37
RETREG3-205ENST00000586870 CLUAP1Q96AJ1 413 aa23.59■■□□□ 1.37
RETREG3-205ENST00000586870 CFAP44Q96MT7 982 aa23.59■■□□□ 1.37
RETREG3-205ENST00000586870 STK32BQ9NY57 414 aa23.59■■□□□ 1.37
RETREG3-205ENST00000586870 LAS1LQ9Y4W2 734 aaKnown RBP23.59■■□□□ 1.37
RETREG3-205ENST00000586870 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.36
RETREG3-205ENST00000586870 LRRC4BQ9NT99 713 aa23.58■■□□□ 1.36
RETREG3-205ENST00000586870 LOC102724428A0A0B4J2F2 783 aa23.57■■□□□ 1.36
RETREG3-205ENST00000586870 SIK1P57059 783 aa23.57■■□□□ 1.36
RETREG3-205ENST00000586870 TTC5Q8N0Z6 440 aa23.57■■□□□ 1.36
RETREG3-205ENST00000586870 TOGARAM1Q9Y4F4 1720 aa23.57■■□□□ 1.36
RETREG3-205ENST00000586870 PTCD1O75127 700 aaKnown RBP23.56■■□□□ 1.36
RETREG3-205ENST00000586870 ATP6V1AP38606 617 aa23.56■■□□□ 1.36
RETREG3-205ENST00000586870 BRPF1P55201 1214 aaPredicted RBP23.56■■□□□ 1.36
RETREG3-205ENST00000586870 R3HDM1Q15032 1099 aaKnown RBP23.56■■□□□ 1.36
RETREG3-205ENST00000586870 DZIP1LQ8IYY4 767 aaKnown RBP23.56■■□□□ 1.36
RETREG3-205ENST00000586870 PSDA5PKW4 1024 aaPredicted RBP23.55■■□□□ 1.36
RETREG3-205ENST00000586870 KIF16BQ96L93 1317 aa23.55■■□□□ 1.36
RETREG3-205ENST00000586870 BTBD11A6QL63 1104 aa23.55■■□□□ 1.36
RETREG3-205ENST00000586870 IPO8O15397 1037 aaKnown RBP23.55■■□□□ 1.36
RETREG3-205ENST00000586870 RLBP1P12271 317 aa23.55■■□□□ 1.36
RETREG3-205ENST00000586870 SLC39A6Q13433 755 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms