RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 BTAF1O14981 1849 aa16.58■□□□□ 0.24
VMP1-202ENST00000585847 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
VMP1-202ENST00000585847 DCTN1Q14203 1278 aa16.57■□□□□ 0.24
VMP1-202ENST00000585847 CCDC27Q2M243 656 aa16.57■□□□□ 0.24
VMP1-202ENST00000585847 DCAF5Q96JK2 942 aa16.57■□□□□ 0.24
VMP1-202ENST00000585847 PPP1R1BQ9UD71 204 aaPredicted RBP16.57■□□□□ 0.24
VMP1-202ENST00000585847 HSP90AB1P08238 724 aaKnown RBP16.56■□□□□ 0.24
VMP1-202ENST00000585847 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
VMP1-202ENST00000585847 RIPK4P57078 832 aa16.56■□□□□ 0.24
VMP1-202ENST00000585847 DCAF8L1A6NGE4 600 aa16.55■□□□□ 0.24
VMP1-202ENST00000585847 MCM10Q7L590 875 aa16.55■□□□□ 0.24
VMP1-202ENST00000585847 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
VMP1-202ENST00000585847 NEUROD2Q15784 382 aa16.54■□□□□ 0.24
VMP1-202ENST00000585847 THUMPD2Q9BTF0 503 aaKnown RBP16.54■□□□□ 0.24
VMP1-202ENST00000585847 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
VMP1-202ENST00000585847 PIGBQ92521 554 aa16.53■□□□□ 0.24
VMP1-202ENST00000585847 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
VMP1-202ENST00000585847 PAPPAQ13219 1627 aa16.52■□□□□ 0.24
VMP1-202ENST00000585847 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
VMP1-202ENST00000585847 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
VMP1-202ENST00000585847 YY1P25490 414 aa16.51■□□□□ 0.23
VMP1-202ENST00000585847 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
VMP1-202ENST00000585847 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
VMP1-202ENST00000585847 ZNF521Q96K83 1311 aa16.5■□□□□ 0.23
VMP1-202ENST00000585847 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
VMP1-202ENST00000585847 LY75O60449 1722 aa16.5■□□□□ 0.23
VMP1-202ENST00000585847 CABP4P57796 275 aa16.49■□□□□ 0.23
VMP1-202ENST00000585847 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
VMP1-202ENST00000585847 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
VMP1-202ENST00000585847 KDM3BQ7LBC6 1761 aa16.49■□□□□ 0.23
VMP1-202ENST00000585847 WDR63Q8IWG1 891 aa16.48■□□□□ 0.23
VMP1-202ENST00000585847 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
VMP1-202ENST00000585847 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
VMP1-202ENST00000585847 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
VMP1-202ENST00000585847 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
VMP1-202ENST00000585847 UBR2Q8IWV8 1755 aa16.48■□□□□ 0.23
VMP1-202ENST00000585847 RGPD3A6NKT7 1758 aaPredicted RBP16.47■□□□□ 0.23
VMP1-202ENST00000585847 RGPD4Q7Z3J3 1758 aa16.47■□□□□ 0.23
VMP1-202ENST00000585847 E9PSI1 815 aa16.47■□□□□ 0.23
VMP1-202ENST00000585847 GOLGA2Q08379 1002 aa16.47■□□□□ 0.23
VMP1-202ENST00000585847 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
VMP1-202ENST00000585847 IL16Q14005 1332 aa16.46■□□□□ 0.23
VMP1-202ENST00000585847 KCPQ6ZWJ8 1503 aa16.46■□□□□ 0.23
VMP1-202ENST00000585847 KCNQ3O43525 872 aa16.46■□□□□ 0.23
VMP1-202ENST00000585847 SLC39A6Q13433 755 aa16.46■□□□□ 0.23
VMP1-202ENST00000585847 PLSCR1O15162 318 aa16.45■□□□□ 0.22
VMP1-202ENST00000585847 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
VMP1-202ENST00000585847 TEFQ10587 303 aa16.45■□□□□ 0.22
VMP1-202ENST00000585847 PROM2Q8N271 834 aa16.45■□□□□ 0.22
VMP1-202ENST00000585847 TAF7Q15545 349 aaPredicted RBP16.44■□□□□ 0.22
VMP1-202ENST00000585847 SLC4A9Q96Q91 983 aa16.44■□□□□ 0.22
VMP1-202ENST00000585847 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
VMP1-202ENST00000585847 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
VMP1-202ENST00000585847 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
VMP1-202ENST00000585847 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
VMP1-202ENST00000585847 ZNF831Q5JPB2 1677 aa16.42■□□□□ 0.22
VMP1-202ENST00000585847 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
VMP1-202ENST00000585847 TJP1Q07157 1748 aa16.42■□□□□ 0.22
VMP1-202ENST00000585847 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
VMP1-202ENST00000585847 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
VMP1-202ENST00000585847 CHL1O00533 1208 aa16.41■□□□□ 0.22
VMP1-202ENST00000585847 CT47B1P0C2W7 299 aaPredicted RBP16.41■□□□□ 0.22
VMP1-202ENST00000585847 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
VMP1-202ENST00000585847 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
VMP1-202ENST00000585847 SMARCC1Q92922 1105 aaPredicted RBP16.4■□□□□ 0.22
VMP1-202ENST00000585847 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
VMP1-202ENST00000585847 NEFLP07196 543 aa16.39■□□□□ 0.21
VMP1-202ENST00000585847 KCNQ4P56696 695 aa16.39■□□□□ 0.21
VMP1-202ENST00000585847 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
VMP1-202ENST00000585847 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
VMP1-202ENST00000585847 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
VMP1-202ENST00000585847 IFT57Q9NWB7 429 aa16.39■□□□□ 0.21
VMP1-202ENST00000585847 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
VMP1-202ENST00000585847 C5P01031 1676 aa16.39■□□□□ 0.21
VMP1-202ENST00000585847 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
VMP1-202ENST00000585847 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 SIK1P57059 783 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 ITPK1Q13572 414 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 TXNRD1Q16881 649 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 TRMT2AQ8IZ69 625 aaKnown RBP16.38■□□□□ 0.21
VMP1-202ENST00000585847 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
VMP1-202ENST00000585847 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
VMP1-202ENST00000585847 PTCD1O75127 700 aaKnown RBP16.37■□□□□ 0.21
VMP1-202ENST00000585847 ZBTB7AO95365 584 aa16.37■□□□□ 0.21
VMP1-202ENST00000585847 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
VMP1-202ENST00000585847 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
VMP1-202ENST00000585847 TSPYL4Q9UJ04 414 aa16.37■□□□□ 0.21
VMP1-202ENST00000585847 PRAMEF22A3QJZ6 481 aa16.36■□□□□ 0.21
VMP1-202ENST00000585847 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
VMP1-202ENST00000585847 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
VMP1-202ENST00000585847 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
VMP1-202ENST00000585847 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
VMP1-202ENST00000585847 GNAI1P63096 354 aa16.35■□□□□ 0.21
VMP1-202ENST00000585847 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
VMP1-202ENST00000585847 SLC27A3Q5K4L6 730 aa16.34■□□□□ 0.21
VMP1-202ENST00000585847 DUSP27Q5VZP5 1158 aa16.34■□□□□ 0.21
VMP1-202ENST00000585847 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms