RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 SALL2Q9Y467 1007 aaPredicted RBP21.97■■□□□ 1.11
GCDH-203ENST00000585420 PALLDQ8WX93 1383 aa21.97■■□□□ 1.11
GCDH-203ENST00000585420 SCN11AQ9UI33 1791 aa21.96■■□□□ 1.11
GCDH-203ENST00000585420 IL17REQ8NFR9 667 aa21.96■■□□□ 1.11
GCDH-203ENST00000585420 ANO8Q9HCE9 1232 aaPredicted RBP21.96■■□□□ 1.11
GCDH-203ENST00000585420 ATG3Q9NT62 314 aa21.96■■□□□ 1.11
GCDH-203ENST00000585420 PSDA5PKW4 1024 aaPredicted RBP21.95■■□□□ 1.1
GCDH-203ENST00000585420 R3HDM1Q15032 1099 aaKnown RBP21.95■■□□□ 1.1
GCDH-203ENST00000585420 SLC27A3Q5K4L6 730 aa21.95■■□□□ 1.1
GCDH-203ENST00000585420 NBPF14Q5TI25 921 aa21.95■■□□□ 1.1
GCDH-203ENST00000585420 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
GCDH-203ENST00000585420 LY75O60449 1722 aa21.95■■□□□ 1.1
GCDH-203ENST00000585420 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
GCDH-203ENST00000585420 CCNL1Q9UK58 526 aaPredicted RBP21.94■■□□□ 1.1
GCDH-203ENST00000585420 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
GCDH-203ENST00000585420 ADAMTS7Q9UKP4 1686 aa21.94■■□□□ 1.1
GCDH-203ENST00000585420 RRP7AQ9Y3A4 280 aaKnown RBP21.93■■□□□ 1.1
GCDH-203ENST00000585420 NEUROD2Q15784 382 aa21.92■■□□□ 1.1
GCDH-203ENST00000585420 VIRMAQ69YN4 1812 aaKnown RBP21.91■■□□□ 1.1
GCDH-203ENST00000585420 MRC1P22897 1456 aa21.91■■□□□ 1.1
GCDH-203ENST00000585420 DCTN1Q14203 1278 aa21.91■■□□□ 1.1
GCDH-203ENST00000585420 MCM10Q7L590 875 aa21.91■■□□□ 1.1
GCDH-203ENST00000585420 CEMIPQ8WUJ3 1361 aa21.9■■□□□ 1.1
GCDH-203ENST00000585420 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
GCDH-203ENST00000585420 SIK1P57059 783 aa21.9■■□□□ 1.1
GCDH-203ENST00000585420 NFE2L2Q16236 605 aa21.9■■□□□ 1.1
GCDH-203ENST00000585420 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
GCDH-203ENST00000585420 TMPOP42166 694 aaKnown RBP21.89■■□□□ 1.1
GCDH-203ENST00000585420 SLC15A2Q16348 729 aa21.89■■□□□ 1.1
GCDH-203ENST00000585420 PAPPAQ13219 1627 aa21.89■■□□□ 1.1
GCDH-203ENST00000585420 ZNF827Q17R98 1081 aa21.89■■□□□ 1.09
GCDH-203ENST00000585420 TEFQ10587 303 aa21.88■■□□□ 1.09
GCDH-203ENST00000585420 SLC39A6Q13433 755 aa21.88■■□□□ 1.09
GCDH-203ENST00000585420 NGEFQ8N5V2 710 aa21.88■■□□□ 1.09
GCDH-203ENST00000585420 SLC4A9Q96Q91 983 aa21.88■■□□□ 1.09
GCDH-203ENST00000585420 STK32BQ9NY57 414 aa21.88■■□□□ 1.09
GCDH-203ENST00000585420 HTATSF1O43719 755 aaKnown RBP21.87■■□□□ 1.09
GCDH-203ENST00000585420 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
GCDH-203ENST00000585420 PTCD1O75127 700 aaKnown RBP21.86■■□□□ 1.09
GCDH-203ENST00000585420 ATP6V1AP38606 617 aa21.86■■□□□ 1.09
GCDH-203ENST00000585420 RIPK4P57078 832 aa21.86■■□□□ 1.09
GCDH-203ENST00000585420 AKT1S1Q96B36 256 aa21.86■■□□□ 1.09
GCDH-203ENST00000585420 ITPK1Q13572 414 aa21.85■■□□□ 1.09
GCDH-203ENST00000585420 DLG5Q8TDM6 1919 aa21.84■■□□□ 1.09
GCDH-203ENST00000585420 PDGFDQ9GZP0 370 aaPredicted RBP21.84■■□□□ 1.09
GCDH-203ENST00000585420 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.09
GCDH-203ENST00000585420 CCDC27Q2M243 656 aa21.83■■□□□ 1.08
GCDH-203ENST00000585420 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.08
GCDH-203ENST00000585420 WWC1Q8IX03 1113 aa21.83■■□□□ 1.08
GCDH-203ENST00000585420 LINC00116Q8NCU8 138 aa21.83■■□□□ 1.08
GCDH-203ENST00000585420 THUMPD2Q9BTF0 503 aaKnown RBP21.83■■□□□ 1.08
GCDH-203ENST00000585420 C5P01031 1676 aa21.82■■□□□ 1.08
GCDH-203ENST00000585420 SIPA1L3O60292 1781 aaPredicted RBP21.82■■□□□ 1.08
GCDH-203ENST00000585420 BTBD11A6QL63 1104 aa21.81■■□□□ 1.08
GCDH-203ENST00000585420 TFCP2L1Q9NZI6 479 aa21.81■■□□□ 1.08
GCDH-203ENST00000585420 TAF1LQ8IZX4 1826 aa21.81■■□□□ 1.08
GCDH-203ENST00000585420 ZNF521Q96K83 1311 aa21.81■■□□□ 1.08
GCDH-203ENST00000585420 ZNF790Q6PG37 636 aa21.8■■□□□ 1.08
GCDH-203ENST00000585420 TRIM35Q9UPQ4 493 aa21.8■■□□□ 1.08
GCDH-203ENST00000585420 LMOD3Q0VAK6 560 aa21.8■■□□□ 1.08
GCDH-203ENST00000585420 KCNQ3O43525 872 aa21.79■■□□□ 1.08
GCDH-203ENST00000585420 TTC5Q8N0Z6 440 aa21.79■■□□□ 1.08
GCDH-203ENST00000585420 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
GCDH-203ENST00000585420 MIS18AQ9NYP9 233 aa21.78■■□□□ 1.08
GCDH-203ENST00000585420 C4BP0C0L5 1744 aa21.78■■□□□ 1.08
GCDH-203ENST00000585420 TAF7Q15545 349 aaPredicted RBP21.77■■□□□ 1.08
GCDH-203ENST00000585420 PNPLA7Q6ZV29 1317 aa21.77■■□□□ 1.08
GCDH-203ENST00000585420 ZNF831Q5JPB2 1677 aa21.77■■□□□ 1.08
GCDH-203ENST00000585420 HMGB2P26583 209 aaKnown RBP21.77■■□□□ 1.08
GCDH-203ENST00000585420 GOLGA2Q08379 1002 aa21.77■■□□□ 1.08
GCDH-203ENST00000585420 AMIGO3Q86WK7 504 aa21.77■■□□□ 1.08
GCDH-203ENST00000585420 ZNF496Q96IT1 587 aaPredicted RBP21.77■■□□□ 1.08
GCDH-203ENST00000585420 SMIM5Q71RC9 77 aa21.76■■□□□ 1.07
GCDH-203ENST00000585420 AK7Q96M32 723 aa21.76■■□□□ 1.07
GCDH-203ENST00000585420 DNAJC10Q8IXB1 793 aa21.75■■□□□ 1.07
GCDH-203ENST00000585420 CDCA7LQ96GN5 454 aa21.75■■□□□ 1.07
GCDH-203ENST00000585420 UBR2Q8IWV8 1755 aa21.75■■□□□ 1.07
GCDH-203ENST00000585420 WDR63Q8IWG1 891 aa21.75■■□□□ 1.07
GCDH-203ENST00000585420 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
GCDH-203ENST00000585420 TUBGCP6Q96RT7 1819 aa21.74■■□□□ 1.07
GCDH-203ENST00000585420 VSIG10Q8N0Z9 540 aa21.74■■□□□ 1.07
GCDH-203ENST00000585420 TJP1Q07157 1748 aa21.73■■□□□ 1.07
GCDH-203ENST00000585420 ZBTB7AO95365 584 aa21.73■■□□□ 1.07
GCDH-203ENST00000585420 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
GCDH-203ENST00000585420 GNPATO15228 680 aa21.72■■□□□ 1.07
GCDH-203ENST00000585420 COL23A1Q86Y22 540 aaPredicted RBP21.72■■□□□ 1.07
GCDH-203ENST00000585420 FMNL2Q96PY5 1086 aa21.72■■□□□ 1.07
GCDH-203ENST00000585420 HEG1Q9ULI3 1381 aa21.72■■□□□ 1.07
GCDH-203ENST00000585420 PHF14O94880 888 aa21.72■■□□□ 1.07
GCDH-203ENST00000585420 CALD1Q05682 793 aaKnown RBP21.72■■□□□ 1.07
GCDH-203ENST00000585420 CRKLP46109 303 aaKnown RBP21.71■■□□□ 1.07
GCDH-203ENST00000585420 RC3H1Q5TC82 1133 aaKnown RBP21.71■■□□□ 1.07
GCDH-203ENST00000585420 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
GCDH-203ENST00000585420 CNTNAP4Q9C0A0 1308 aa21.71■■□□□ 1.07
GCDH-203ENST00000585420 CICQ96RK0 1608 aaPredicted RBP21.71■■□□□ 1.07
GCDH-203ENST00000585420 E9PSI1 815 aa21.7■■□□□ 1.06
GCDH-203ENST00000585420 CYP19A1P11511 503 aaPredicted RBP21.7■■□□□ 1.06
GCDH-203ENST00000585420 QSER1Q2KHR3 1735 aa21.7■■□□□ 1.06
GCDH-203ENST00000585420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.69■■□□□ 1.06
GCDH-203ENST00000585420 MSH5O43196 834 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms