RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 TMEM132EQ6IEE7 984 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 TNPO1Q92973 898 aaKnown RBP5.14□□□□□ -1.59
RTTN-206ENST00000581161 C1orf115Q9H7X2 142 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 SEPT10Q9P0V9 454 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 SALL3Q9BXA9 1300 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 ABCA3Q99758 1704 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 AEBP2Q6ZN18 517 aaPredicted RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 IPO8O15397 1037 aaKnown RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 NEBLO76041 1014 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 TMEM132AQ24JP5 1023 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 HSP90AB2PQ58FF8 381 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 GORABQ5T7V8 394 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 WDR63Q8IWG1 891 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 DDX49Q9Y6V7 483 aaKnown RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 ELL2O00472 640 aaPredicted RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 SRPK2P78362 688 aaKnown RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 KIAA1211Q6ZU35 1233 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 SYAP1Q96A49 352 aaPredicted RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 HOMER2Q9NSB8 354 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 PES1O00541 588 aaKnown RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 SKOR2Q2VWA4 1001 aaPredicted RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 FOXD4L5Q5VV16 416 aaPredicted RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 SPATA24Q86W54 205 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 FOXD4L4Q8WXT5 416 aaPredicted RBP5.13□□□□□ -1.59
RTTN-206ENST00000581161 CFAP57Q96MR6 1250 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 CHMP4AQ9BY43 222 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 DNAI2Q9GZS0 605 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 STK26Q9P289 416 aa5.13□□□□□ -1.59
RTTN-206ENST00000581161 PPM1EQ8WY54 764 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 GTPBP4Q9BZE4 634 aaKnown RBP5.12□□□□□ -1.59
RTTN-206ENST00000581161 RIMS2Q9UQ26 1411 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 CHMP4CQ96CF2 233 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 TRIM21P19474 475 aaKnown RBP5.12□□□□□ -1.59
RTTN-206ENST00000581161 NOM1Q5C9Z4 860 aaKnown RBP5.12□□□□□ -1.59
RTTN-206ENST00000581161 TMEM57Q8N5G2 664 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 TMEM87AQ8NBN3 555 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 SLC52A1Q9NWF4 448 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.12□□□□□ -1.59
RTTN-206ENST00000581161 IPO7O95373 1038 aaKnown RBP5.12□□□□□ -1.59
RTTN-206ENST00000581161 TRIM27P14373 513 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 RIPK4P57078 832 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 RUFY1Q96T51 708 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 GGNBP2Q9H3C7 697 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 PLEKHG2Q9H7P9 1386 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 NASPP49321 788 aaPredicted RBP5.12□□□□□ -1.59
RTTN-206ENST00000581161 RBM10P98175 930 aaKnown RBP5.12□□□□□ -1.59
RTTN-206ENST00000581161 SSH1Q8WYL5 1049 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 CABP2Q9NPB3 220 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 DESP17661 470 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 SSFA2P28290 1259 aa5.12□□□□□ -1.59
RTTN-206ENST00000581161 RRP9O43818 475 aaKnown RBP5.11□□□□□ -1.59
RTTN-206ENST00000581161 MCTP1Q6DN14 999 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 ATF7IPQ6VMQ6 1270 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 INCENPQ9NQS7 918 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 HDAC5Q9UQL6 1122 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 GGT6Q6P531 493 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 ZMYND15Q9H091 742 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 ZWINTO95229 277 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 ZFYVE27Q5T4F4 411 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 CAGE1Q8TC20 777 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 GPATCH3Q96I76 525 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 FSD2A1L4K1 749 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 NOL8Q76FK4 1167 aaKnown RBP5.11□□□□□ -1.59
RTTN-206ENST00000581161 ANKRD20A12PQ8NF67 263 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 FAM13BQ9NYF5 915 aa5.11□□□□□ -1.59
RTTN-206ENST00000581161 CRB1P82279 1406 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 STAMBPO95630 424 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 PCMTD1Q96MG8 357 aaPredicted RBP5.1□□□□□ -1.59
RTTN-206ENST00000581161 A0A1W2PP64 1363 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 KIF20AO95235 890 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 CHD1LQ86WJ1 897 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 ACBD3Q9H3P7 528 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 KIF3AQ9Y496 699 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 UQCRHLA0A096LP55 91 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 K7ELQ4 463 aaPredicted RBP5.1□□□□□ -1.59
RTTN-206ENST00000581161 GTF2E1P29083 439 aaPredicted RBP5.1□□□□□ -1.59
RTTN-206ENST00000581161 AKAP17AQ02040 695 aaKnown RBP5.1□□□□□ -1.59
RTTN-206ENST00000581161 CAVIN1Q6NZI2 390 aaKnown RBP5.1□□□□□ -1.59
RTTN-206ENST00000581161 RBM42Q9BTD8 480 aaKnown RBP5.1□□□□□ -1.59
RTTN-206ENST00000581161 KLHL34Q8N239 644 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 KIF2CQ99661 725 aa5.1□□□□□ -1.59
RTTN-206ENST00000581161 ZNF831Q5JPB2 1677 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 PABPN1LA6NDY0 278 aaKnown RBP5.09□□□□□ -1.59
RTTN-206ENST00000581161 CDC45O75419 566 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 HDGFP51858 240 aaKnown RBP5.09□□□□□ -1.59
RTTN-206ENST00000581161 HSP90AB4PQ58FF6 505 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 TJP1Q07157 1748 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 SEPT6Q14141 434 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 KIF16BQ96L93 1317 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 HDAC1Q13547 482 aaPredicted RBP5.09□□□□□ -1.59
RTTN-206ENST00000581161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.09□□□□□ -1.59
RTTN-206ENST00000581161 EVC2Q86UK5 1308 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.09□□□□□ -1.59
RTTN-206ENST00000581161 GAS2L3Q86XJ1 694 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 MNS1Q8NEH6 495 aa5.09□□□□□ -1.59
RTTN-206ENST00000581161 DIAPH1O60610 1272 aaKnown RBP5.09□□□□□ -1.6
RTTN-206ENST00000581161 CIZ1Q9ULV3 898 aaPredicted RBP5.09□□□□□ -1.6
RTTN-206ENST00000581161 TRIM35Q9UPQ4 493 aa5.09□□□□□ -1.6
RTTN-206ENST00000581161 ERBB4Q15303 1308 aa5.09□□□□□ -1.6
RTTN-206ENST00000581161 KIAA0232Q92628 1395 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms