RNA–Protein interactions for RNA: ENST00000580861.1

LINC00511-210, long intergenic non-protein coding RNA 511, human

TSL 4

Gene LINC00511, Length 467 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00511-210	ENST00000580861	RRP7A	Q9Y3A4	280 aa	Known RBP	11.74	□□□□□ -0.53
LINC00511-210	ENST00000580861	DLG5	Q8TDM6	1919 aa		11.74	□□□□□ -0.53
LINC00511-210	ENST00000580861	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.73	□□□□□ -0.53
LINC00511-210	ENST00000580861	BAG6	P46379	1132 aa		11.73	□□□□□ -0.53
LINC00511-210	ENST00000580861	EZH2	Q15910	746 aa	Known RBP	11.73	□□□□□ -0.53
LINC00511-210	ENST00000580861	RGPD4	Q7Z3J3	1758 aa		11.73	□□□□□ -0.53
LINC00511-210	ENST00000580861	THUMPD2	Q9BTF0	503 aa	Known RBP	11.73	□□□□□ -0.53
LINC00511-210	ENST00000580861	VIRMA	Q69YN4	1812 aa	Known RBP	11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	NEFM	P07197	916 aa		11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	SF3B2	Q13435	895 aa	Known RBP	11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	TXNRD1	Q16881	649 aa		11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	FAM9B	Q8IZU0	186 aa		11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	SLC4A9	Q96Q91	983 aa		11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	LRRC4B	Q9NT99	713 aa		11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	SIPA1L3	O60292	1781 aa	Predicted RBP	11.72	□□□□□ -0.53
LINC00511-210	ENST00000580861	PALLD	Q8WX93	1383 aa		11.71	□□□□□ -0.53
LINC00511-210	ENST00000580861	LY75	O60449	1722 aa		11.71	□□□□□ -0.54
LINC00511-210	ENST00000580861	SLC39A6	Q13433	755 aa		11.7	□□□□□ -0.54
LINC00511-210	ENST00000580861	CCDC27	Q2M243	656 aa		11.7	□□□□□ -0.54
LINC00511-210	ENST00000580861	RTF1	Q92541	710 aa	Known RBP	11.7	□□□□□ -0.54
LINC00511-210	ENST00000580861	SMARCC1	Q92922	1105 aa	Predicted RBP	11.7	□□□□□ -0.54
LINC00511-210	ENST00000580861	RREB1	Q92766	1687 aa		11.7	□□□□□ -0.54
LINC00511-210	ENST00000580861	PAPPA	Q13219	1627 aa		11.7	□□□□□ -0.54
LINC00511-210	ENST00000580861	KCNQ3	O43525	872 aa		11.69	□□□□□ -0.54
LINC00511-210	ENST00000580861	LMOD3	Q0VAK6	560 aa		11.69	□□□□□ -0.54
LINC00511-210	ENST00000580861	NEUROD2	Q15784	382 aa		11.69	□□□□□ -0.54
LINC00511-210	ENST00000580861	SLC27A3	Q5K4L6	730 aa		11.69	□□□□□ -0.54
LINC00511-210	ENST00000580861	KCP	Q6ZWJ8	1503 aa		11.69	□□□□□ -0.54
LINC00511-210	ENST00000580861	LOC102724428	A0A0B4J2F2	783 aa		11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	ZNF853	P0CG23	659 aa		11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	KCNQ4	P56696	695 aa		11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	SIK1	P57059	783 aa		11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	TEF	Q10587	303 aa		11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	ITPK1	Q13572	414 aa		11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	TAF7	Q15545	349 aa	Predicted RBP	11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	ZNF790	Q6PG37	636 aa		11.68	□□□□□ -0.54
LINC00511-210	ENST00000580861	ZNF521	Q96K83	1311 aa		11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	NUP188	Q5SRE5	1749 aa		11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	SENP3-EIF4A1	A0A087X0R7	540 aa		11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	CHL1	O00533	1208 aa		11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	WWC1	Q8IX03	1113 aa		11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	ZNF496	Q96IT1	587 aa	Predicted RBP	11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	YTHDC1	Q96MU7	727 aa	Known RBP	11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	UBR2	Q8IWV8	1755 aa		11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	HEG1	Q9ULI3	1381 aa		11.67	□□□□□ -0.54
LINC00511-210	ENST00000580861	ZNF831	Q5JPB2	1677 aa		11.66	□□□□□ -0.54
LINC00511-210	ENST00000580861	BTBD11	A6QL63	1104 aa		11.66	□□□□□ -0.54
LINC00511-210	ENST00000580861	BABAM1	Q9NWV8	329 aa		11.66	□□□□□ -0.54
LINC00511-210	ENST00000580861	MIS18A	Q9NYP9	233 aa		11.66	□□□□□ -0.54
LINC00511-210	ENST00000580861	CCNL1	Q9UK58	526 aa	Predicted RBP	11.66	□□□□□ -0.54
LINC00511-210	ENST00000580861	CIC	Q96RK0	1608 aa	Predicted RBP	11.65	□□□□□ -0.54
LINC00511-210	ENST00000580861	PTCD1	O75127	700 aa	Known RBP	11.65	□□□□□ -0.54
LINC00511-210	ENST00000580861	NGEF	Q8N5V2	710 aa		11.65	□□□□□ -0.54
LINC00511-210	ENST00000580861	LINC00116	Q8NCU8	138 aa		11.65	□□□□□ -0.54
LINC00511-210	ENST00000580861	AKT1S1	Q96B36	256 aa		11.65	□□□□□ -0.54
LINC00511-210	ENST00000580861	EIF4A1	P60842	406 aa	Known RBP	11.64	□□□□□ -0.55
LINC00511-210	ENST00000580861	ZNF827	Q17R98	1081 aa		11.64	□□□□□ -0.55
LINC00511-210	ENST00000580861	VSIG10	Q8N0Z9	540 aa		11.64	□□□□□ -0.55
LINC00511-210	ENST00000580861	CFAP44	Q96MT7	982 aa		11.64	□□□□□ -0.55
LINC00511-210	ENST00000580861	KDM3B	Q7LBC6	1761 aa		11.64	□□□□□ -0.55
LINC00511-210	ENST00000580861	TAF1L	Q8IZX4	1826 aa		11.63	□□□□□ -0.55
LINC00511-210	ENST00000580861	ATP6V1A	P38606	617 aa		11.63	□□□□□ -0.55
LINC00511-210	ENST00000580861	AMIGO3	Q86WK7	504 aa		11.63	□□□□□ -0.55
LINC00511-210	ENST00000580861	RBM42	Q9BTD8	480 aa	Known RBP	11.63	□□□□□ -0.55
LINC00511-210	ENST00000580861	IFT57	Q9NWB7	429 aa		11.63	□□□□□ -0.55
LINC00511-210	ENST00000580861	IL16	Q14005	1332 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	MYH14	Q7Z406	1995 aa	Known RBP	11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	WDR63	Q8IWG1	891 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	DNAJC10	Q8IXB1	793 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	TTC5	Q8N0Z6	440 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	FMNL2	Q96PY5	1086 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	TSPYL4	Q9UJ04	414 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	TJP1	Q07157	1748 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	C5	P01031	1676 aa		11.62	□□□□□ -0.55
LINC00511-210	ENST00000580861	CNTNAP4	Q9C0A0	1308 aa		11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	COL5A3	P25940	1745 aa	Predicted RBP	11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	PRAMEF22	A3QJZ6	481 aa		11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	GIGYF1	O75420	1035 aa	Predicted RBP	11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	CYP19A1	P11511	503 aa	Predicted RBP	11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	SLC15A2	Q16348	729 aa		11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	RC3H1	Q5TC82	1133 aa	Known RBP	11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	INTS5	Q6P9B9	1019 aa	Known RBP	11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	MBIP	Q9NS73	344 aa		11.61	□□□□□ -0.55
LINC00511-210	ENST00000580861	C4B	P0C0L5	1744 aa		11.6	□□□□□ -0.55
LINC00511-210	ENST00000580861	SNRPA1	P09661	255 aa	Known RBP	11.6	□□□□□ -0.55
LINC00511-210	ENST00000580861	CALD1	Q05682	793 aa	Known RBP	11.6	□□□□□ -0.55
LINC00511-210	ENST00000580861	SALL2	Q9Y467	1007 aa	Predicted RBP	11.6	□□□□□ -0.55
LINC00511-210	ENST00000580861	HMGB2	P26583	209 aa	Known RBP	11.59	□□□□□ -0.55
LINC00511-210	ENST00000580861	CRKL	P46109	303 aa	Known RBP	11.59	□□□□□ -0.55
LINC00511-210	ENST00000580861	GNAI1	P63096	354 aa		11.59	□□□□□ -0.55
LINC00511-210	ENST00000580861	KRT24	Q2M2I5	525 aa		11.59	□□□□□ -0.55
LINC00511-210	ENST00000580861	NBPF14	Q5TI25	921 aa		11.59	□□□□□ -0.55
LINC00511-210	ENST00000580861	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.59	□□□□□ -0.55
LINC00511-210	ENST00000580861	USP16	Q9Y5T5	823 aa		11.59	□□□□□ -0.55
LINC00511-210	ENST00000580861	SRCAP	Q6ZRS2	3230 aa		11.58	□□□□□ -0.56
LINC00511-210	ENST00000580861	R3HDM1	Q15032	1099 aa	Known RBP	11.58	□□□□□ -0.56
LINC00511-210	ENST00000580861	SMIM5	Q71RC9	77 aa		11.58	□□□□□ -0.56
LINC00511-210	ENST00000580861	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms