RNA–Protein interactions for RNA: ENST00000580396.1

CPD-204, Transcript of carboxypeptidase D, humanhuman

TSL 5

Gene CPD, Length 2,733 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-204ENST00000580396 TTC22Q5TAA0 569 aa11.36□□□□□ -0.59
CPD-204ENST00000580396 SIRT1Q96EB6 747 aa11.36□□□□□ -0.59
CPD-204ENST00000580396 COG3Q96JB2 828 aa11.36□□□□□ -0.59
CPD-204ENST00000580396 RGS12O14924 1447 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 TECPR2O15040 1411 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 GAS2L2Q8NHY3 880 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
CPD-204ENST00000580396 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
CPD-204ENST00000580396 RGPD4Q7Z3J3 1758 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 KIAA0232Q92628 1395 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 DISP2A7MBM2 1401 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 DCCP43146 1447 aa11.35□□□□□ -0.59
CPD-204ENST00000580396 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
CPD-204ENST00000580396 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
CPD-204ENST00000580396 GAS2L3Q86XJ1 694 aa11.34□□□□□ -0.59
CPD-204ENST00000580396 AK9Q5TCS8 1911 aa11.34□□□□□ -0.59
CPD-204ENST00000580396 RGPD1P0DJD0 1748 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 SSFA2P28290 1259 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 KLHL40Q2TBA0 621 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
CPD-204ENST00000580396 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 ESPNB1AK53 854 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 ZNF592Q92610 1267 aa11.33□□□□□ -0.6
CPD-204ENST00000580396 PTPRCP08575 1304 aa11.32□□□□□ -0.6
CPD-204ENST00000580396 FAM83GA6ND36 823 aa11.32□□□□□ -0.6
CPD-204ENST00000580396 BAG4O95429 457 aaKnown RBP11.32□□□□□ -0.6
CPD-204ENST00000580396 NUCB2P80303 420 aa11.32□□□□□ -0.6
CPD-204ENST00000580396 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
CPD-204ENST00000580396 USP26Q9BXU7 913 aa11.32□□□□□ -0.6
CPD-204ENST00000580396 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
CPD-204ENST00000580396 METP08581 1390 aa11.32□□□□□ -0.6
CPD-204ENST00000580396 TOPAZ1Q8N9V7 1692 aa11.32□□□□□ -0.6
CPD-204ENST00000580396 CHL1O00533 1208 aa11.31□□□□□ -0.6
CPD-204ENST00000580396 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
CPD-204ENST00000580396 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
CPD-204ENST00000580396 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
CPD-204ENST00000580396 A0A0U1RQG5 324 aaPredicted RBP11.31□□□□□ -0.6
CPD-204ENST00000580396 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
CPD-204ENST00000580396 CASC1Q6TDU7 716 aa11.3□□□□□ -0.6
CPD-204ENST00000580396 TRIM44Q96DX7 344 aaPredicted RBP11.3□□□□□ -0.6
CPD-204ENST00000580396 MSH6P52701 1360 aa11.3□□□□□ -0.6
CPD-204ENST00000580396 CCDC173Q0VFZ6 552 aa11.3□□□□□ -0.6
CPD-204ENST00000580396 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
CPD-204ENST00000580396 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
CPD-204ENST00000580396 PPP1R9BQ96SB3 815 aa11.3□□□□□ -0.6
CPD-204ENST00000580396 TUBGCP6Q96RT7 1819 aa11.3□□□□□ -0.6
CPD-204ENST00000580396 MARF1Q9Y4F3 1742 aaKnown RBP11.29□□□□□ -0.6
CPD-204ENST00000580396 ERBB4Q15303 1308 aa11.29□□□□□ -0.6
CPD-204ENST00000580396 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
CPD-204ENST00000580396 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
CPD-204ENST00000580396 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
CPD-204ENST00000580396 PEAK1Q9H792 1746 aa11.29□□□□□ -0.6
CPD-204ENST00000580396 SDSP20132 328 aa11.29□□□□□ -0.6
CPD-204ENST00000580396 ZNF445P59923 1031 aa11.29□□□□□ -0.6
CPD-204ENST00000580396 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
CPD-204ENST00000580396 NAP1L5Q96NT1 182 aaPredicted RBP11.29□□□□□ -0.6
CPD-204ENST00000580396 DDX49Q9Y6V7 483 aaKnown RBP11.29□□□□□ -0.6
CPD-204ENST00000580396 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 ST18O60284 1047 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 REC8O95072 547 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 TMED8Q6PL24 325 aaPredicted RBP11.28□□□□□ -0.6
CPD-204ENST00000580396 WDR70Q9NW82 654 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 CRB1P82279 1406 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 SULT6B1Q6IMI4 303 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 TXNDC2Q86VQ3 553 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 OSBPL3Q9H4L5 887 aa11.28□□□□□ -0.6
CPD-204ENST00000580396 NASPP49321 788 aaPredicted RBP11.27□□□□□ -0.61
CPD-204ENST00000580396 OTUD7AQ8TE49 926 aaPredicted RBP11.27□□□□□ -0.61
CPD-204ENST00000580396 UBR1Q8IWV7 1749 aa11.27□□□□□ -0.61
CPD-204ENST00000580396 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
CPD-204ENST00000580396 HMMRO75330 724 aa11.27□□□□□ -0.61
CPD-204ENST00000580396 CACNA1FO60840 1977 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
CPD-204ENST00000580396 PROM2Q8N271 834 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 MEIS3Q99687 375 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 TTC21BQ7Z4L5 1316 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 ARHGEF10O15013 1369 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 ERC2O15083 957 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
CPD-204ENST00000580396 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 ZNF526Q8TF50 670 aaPredicted RBP11.26□□□□□ -0.61
CPD-204ENST00000580396 ANP32BQ92688 251 aaKnown RBP11.26□□□□□ -0.61
CPD-204ENST00000580396 LMBRD1Q9NUN5 540 aa11.26□□□□□ -0.61
CPD-204ENST00000580396 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.25□□□□□ -0.61
CPD-204ENST00000580396 CCT4P50991 539 aaKnown RBP11.25□□□□□ -0.61
CPD-204ENST00000580396 MCTP1Q6DN14 999 aa11.25□□□□□ -0.61
CPD-204ENST00000580396 MCM10Q7L590 875 aa11.25□□□□□ -0.61
CPD-204ENST00000580396 SMARCA5O60264 1052 aaPredicted RBP11.24□□□□□ -0.61
CPD-204ENST00000580396 RXRBP28702 533 aa11.24□□□□□ -0.61
CPD-204ENST00000580396 USP6P35125 1406 aa11.24□□□□□ -0.61
CPD-204ENST00000580396 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
CPD-204ENST00000580396 GTPBP6O43824 516 aaPredicted RBP11.24□□□□□ -0.61
CPD-204ENST00000580396 ZSCAN23Q3MJ62 389 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms