RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 NCBP3Q53F19 620 aaKnown RBP29.96■■■□□ 2.39
NDEL1-207ENST00000580012 SMARCC1Q92922 1105 aaPredicted RBP29.96■■■□□ 2.39
NDEL1-207ENST00000580012 ASAP1Q9ULH1 1129 aa29.96■■■□□ 2.39
NDEL1-207ENST00000580012 TRIM35Q9UPQ4 493 aa29.96■■■□□ 2.39
NDEL1-207ENST00000580012 LMOD3Q0VAK6 560 aa29.94■■■□□ 2.38
NDEL1-207ENST00000580012 TEFQ10587 303 aa29.93■■■□□ 2.38
NDEL1-207ENST00000580012 NEUROD2Q15784 382 aa29.93■■■□□ 2.38
NDEL1-207ENST00000580012 TXNRD1Q16881 649 aa29.93■■■□□ 2.38
NDEL1-207ENST00000580012 SCN11AQ9UI33 1791 aa29.9■■■□□ 2.38
NDEL1-207ENST00000580012 THUMPD2Q9BTF0 503 aaKnown RBP29.9■■■□□ 2.38
NDEL1-207ENST00000580012 PALLDQ8WX93 1383 aa29.9■■■□□ 2.38
NDEL1-207ENST00000580012 KAT6BQ8WYB5 2073 aa29.89■■■□□ 2.38
NDEL1-207ENST00000580012 TAF7Q15545 349 aaPredicted RBP29.89■■■□□ 2.38
NDEL1-207ENST00000580012 SLC27A3Q5K4L6 730 aa29.89■■■□□ 2.38
NDEL1-207ENST00000580012 BTAF1O14981 1849 aa29.89■■■□□ 2.38
NDEL1-207ENST00000580012 ITGB4P16144 1822 aa29.87■■■□□ 2.37
NDEL1-207ENST00000580012 CCDC27Q2M243 656 aa29.87■■■□□ 2.37
NDEL1-207ENST00000580012 LRRC4BQ9NT99 713 aa29.87■■■□□ 2.37
NDEL1-207ENST00000580012 SLC39A6Q13433 755 aa29.86■■■□□ 2.37
NDEL1-207ENST00000580012 LOC102724428A0A0B4J2F2 783 aa29.84■■■□□ 2.37
NDEL1-207ENST00000580012 BTBD11A6QL63 1104 aa29.84■■■□□ 2.37
NDEL1-207ENST00000580012 SIK1P57059 783 aa29.84■■■□□ 2.37
NDEL1-207ENST00000580012 SLC4A9Q96Q91 983 aa29.84■■■□□ 2.37
NDEL1-207ENST00000580012 ZNF790Q6PG37 636 aa29.83■■■□□ 2.37
NDEL1-207ENST00000580012 NGEFQ8N5V2 710 aa29.83■■■□□ 2.37
NDEL1-207ENST00000580012 BABAM1Q9NWV8 329 aa29.82■■■□□ 2.36
NDEL1-207ENST00000580012 CCNL1Q9UK58 526 aaPredicted RBP29.82■■■□□ 2.36
NDEL1-207ENST00000580012 RGPD3A6NKT7 1758 aaPredicted RBP29.82■■■□□ 2.36
NDEL1-207ENST00000580012 RGPD4Q7Z3J3 1758 aa29.82■■■□□ 2.36
NDEL1-207ENST00000580012 KCNQ3O43525 872 aa29.8■■■□□ 2.36
NDEL1-207ENST00000580012 KCNQ4P56696 695 aa29.8■■■□□ 2.36
NDEL1-207ENST00000580012 WWC1Q8IX03 1113 aa29.8■■■□□ 2.36
NDEL1-207ENST00000580012 MIS18AQ9NYP9 233 aa29.79■■■□□ 2.36
NDEL1-207ENST00000580012 DLG5Q8TDM6 1919 aa29.79■■■□□ 2.36
NDEL1-207ENST00000580012 SENP3-EIF4A1A0A087X0R7 540 aa29.78■■■□□ 2.36
NDEL1-207ENST00000580012 CHL1O00533 1208 aa29.78■■■□□ 2.36
NDEL1-207ENST00000580012 PTCD1O75127 700 aaKnown RBP29.78■■■□□ 2.36
NDEL1-207ENST00000580012 RBM42Q9BTD8 480 aaKnown RBP29.78■■■□□ 2.36
NDEL1-207ENST00000580012 HMGB2P26583 209 aaKnown RBP29.77■■■□□ 2.36
NDEL1-207ENST00000580012 ITPK1Q13572 414 aa29.77■■■□□ 2.36
NDEL1-207ENST00000580012 ZNF496Q96IT1 587 aaPredicted RBP29.77■■■□□ 2.36
NDEL1-207ENST00000580012 ZNF853P0CG23 659 aa29.76■■■□□ 2.35
NDEL1-207ENST00000580012 ATP6V1AP38606 617 aa29.76■■■□□ 2.35
NDEL1-207ENST00000580012 TTC5Q8N0Z6 440 aa29.76■■■□□ 2.35
NDEL1-207ENST00000580012 VSIG10Q8N0Z9 540 aa29.76■■■□□ 2.35
NDEL1-207ENST00000580012 CALD1Q05682 793 aaKnown RBP29.75■■■□□ 2.35
NDEL1-207ENST00000580012 SIPA1L3O60292 1781 aaPredicted RBP29.75■■■□□ 2.35
NDEL1-207ENST00000580012 LY75O60449 1722 aa29.74■■■□□ 2.35
NDEL1-207ENST00000580012 CFAP44Q96MT7 982 aa29.74■■■□□ 2.35
NDEL1-207ENST00000580012 KCPQ6ZWJ8 1503 aa29.73■■■□□ 2.35
NDEL1-207ENST00000580012 PSDA5PKW4 1024 aaPredicted RBP29.73■■■□□ 2.35
NDEL1-207ENST00000580012 FMNL2Q96PY5 1086 aa29.73■■■□□ 2.35
NDEL1-207ENST00000580012 NBPF14Q5TI25 921 aa29.72■■■□□ 2.35
NDEL1-207ENST00000580012 WDR63Q8IWG1 891 aa29.72■■■□□ 2.35
NDEL1-207ENST00000580012 AKT1S1Q96B36 256 aa29.72■■■□□ 2.35
NDEL1-207ENST00000580012 RREB1Q92766 1687 aa29.72■■■□□ 2.35
NDEL1-207ENST00000580012 PAPPAQ13219 1627 aa29.71■■■□□ 2.35
NDEL1-207ENST00000580012 EIF4A1P60842 406 aaKnown RBP29.71■■■□□ 2.35
NDEL1-207ENST00000580012 LINC00116Q8NCU8 138 aa29.71■■■□□ 2.35
NDEL1-207ENST00000580012 ANO8Q9HCE9 1232 aaPredicted RBP29.71■■■□□ 2.35
NDEL1-207ENST00000580012 IFT57Q9NWB7 429 aa29.71■■■□□ 2.35
NDEL1-207ENST00000580012 TSPYL4Q9UJ04 414 aa29.71■■■□□ 2.35
NDEL1-207ENST00000580012 SALL2Q9Y467 1007 aaPredicted RBP29.71■■■□□ 2.35
NDEL1-207ENST00000580012 ZNF521Q96K83 1311 aa29.71■■■□□ 2.35
NDEL1-207ENST00000580012 HEG1Q9ULI3 1381 aa29.7■■■□□ 2.35
NDEL1-207ENST00000580012 IL16Q14005 1332 aa29.7■■■□□ 2.34
NDEL1-207ENST00000580012 VIRMAQ69YN4 1812 aaKnown RBP29.69■■■□□ 2.34
NDEL1-207ENST00000580012 GNAI1P63096 354 aa29.68■■■□□ 2.34
NDEL1-207ENST00000580012 SLC15A2Q16348 729 aa29.68■■■□□ 2.34
NDEL1-207ENST00000580012 DNAJC10Q8IXB1 793 aa29.68■■■□□ 2.34
NDEL1-207ENST00000580012 LRP5O75197 1615 aa29.67■■■□□ 2.34
NDEL1-207ENST00000580012 ZNF827Q17R98 1081 aa29.67■■■□□ 2.34
NDEL1-207ENST00000580012 RC3H1Q5TC82 1133 aaKnown RBP29.67■■■□□ 2.34
NDEL1-207ENST00000580012 TEX13AQ9BXU3 409 aaPredicted RBP29.67■■■□□ 2.34
NDEL1-207ENST00000580012 STK32BQ9NY57 414 aa29.66■■■□□ 2.34
NDEL1-207ENST00000580012 ZNF831Q5JPB2 1677 aa29.66■■■□□ 2.34
NDEL1-207ENST00000580012 SNRPA1P09661 255 aaKnown RBP29.65■■■□□ 2.34
NDEL1-207ENST00000580012 CYP19A1P11511 503 aaPredicted RBP29.65■■■□□ 2.34
NDEL1-207ENST00000580012 MBIPQ9NS73 344 aa29.65■■■□□ 2.34
NDEL1-207ENST00000580012 LAS1LQ9Y4W2 734 aaKnown RBP29.65■■■□□ 2.34
NDEL1-207ENST00000580012 NUP188Q5SRE5 1749 aa29.65■■■□□ 2.34
NDEL1-207ENST00000580012 GIGYF1O75420 1035 aaPredicted RBP29.63■■■□□ 2.33
NDEL1-207ENST00000580012 CNTNAP4Q9C0A0 1308 aa29.63■■■□□ 2.33
NDEL1-207ENST00000580012 UBR2Q8IWV8 1755 aa29.62■■■□□ 2.33
NDEL1-207ENST00000580012 R3HDM1Q15032 1099 aaKnown RBP29.61■■■□□ 2.33
NDEL1-207ENST00000580012 INTS5Q6P9B9 1019 aaKnown RBP29.61■■■□□ 2.33
NDEL1-207ENST00000580012 USP16Q9Y5T5 823 aa29.61■■■□□ 2.33
NDEL1-207ENST00000580012 PRAMEF22A3QJZ6 481 aa29.6■■■□□ 2.33
NDEL1-207ENST00000580012 STARD3NLO95772 234 aa29.6■■■□□ 2.33
NDEL1-207ENST00000580012 CRKLP46109 303 aaKnown RBP29.59■■■□□ 2.33
NDEL1-207ENST00000580012 SPINK5Q9NQ38 1064 aaPredicted RBP29.59■■■□□ 2.33
NDEL1-207ENST00000580012 CICQ96RK0 1608 aaPredicted RBP29.59■■■□□ 2.33
NDEL1-207ENST00000580012 TFCP2L1Q9NZI6 479 aa29.58■■■□□ 2.33
NDEL1-207ENST00000580012 KDM3BQ7LBC6 1761 aa29.57■■■□□ 2.32
NDEL1-207ENST00000580012 AMIGO3Q86WK7 504 aa29.57■■■□□ 2.32
NDEL1-207ENST00000580012 AK7Q96M32 723 aa29.57■■■□□ 2.32
NDEL1-207ENST00000580012 RPS6KA4O75676 772 aa29.56■■■□□ 2.32
NDEL1-207ENST00000580012 CCDC87Q9NVE4 849 aa29.56■■■□□ 2.32
NDEL1-207ENST00000580012 KRT24Q2M2I5 525 aa29.55■■■□□ 2.32
NDEL1-207ENST00000580012 C5P01031 1676 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms