RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MRC1P22897 1456 aa16.84■□□□□ 0.29
TRAPPC1-206ENST00000573989 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
TRAPPC1-206ENST00000573989 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.28
TRAPPC1-206ENST00000573989 PROM2Q8N271 834 aa16.83■□□□□ 0.28
TRAPPC1-206ENST00000573989 CCNL1Q9UK58 526 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC1-206ENST00000573989 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
TRAPPC1-206ENST00000573989 CCDC184Q52MB2 194 aa16.82■□□□□ 0.28
TRAPPC1-206ENST00000573989 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
TRAPPC1-206ENST00000573989 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
TRAPPC1-206ENST00000573989 RIPK4P57078 832 aa16.81■□□□□ 0.28
TRAPPC1-206ENST00000573989 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
TRAPPC1-206ENST00000573989 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
TRAPPC1-206ENST00000573989 SIPA1L3O60292 1781 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC1-206ENST00000573989 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
TRAPPC1-206ENST00000573989 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
TRAPPC1-206ENST00000573989 SIK1P57059 783 aa16.8■□□□□ 0.28
TRAPPC1-206ENST00000573989 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
TRAPPC1-206ENST00000573989 STK32BQ9NY57 414 aa16.8■□□□□ 0.28
TRAPPC1-206ENST00000573989 TAF1LQ8IZX4 1826 aa16.8■□□□□ 0.28
TRAPPC1-206ENST00000573989 C5P01031 1676 aa16.79■□□□□ 0.28
TRAPPC1-206ENST00000573989 MCM10Q7L590 875 aa16.79■□□□□ 0.28
TRAPPC1-206ENST00000573989 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
TRAPPC1-206ENST00000573989 ZNF831Q5JPB2 1677 aa16.78■□□□□ 0.28
TRAPPC1-206ENST00000573989 CCER2I3L3R5 266 aa16.78■□□□□ 0.28
TRAPPC1-206ENST00000573989 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
TRAPPC1-206ENST00000573989 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
TRAPPC1-206ENST00000573989 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
TRAPPC1-206ENST00000573989 BTBD11A6QL63 1104 aa16.77■□□□□ 0.28
TRAPPC1-206ENST00000573989 DCTN1Q14203 1278 aa16.77■□□□□ 0.28
TRAPPC1-206ENST00000573989 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
TRAPPC1-206ENST00000573989 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
TRAPPC1-206ENST00000573989 R3HDM1Q15032 1099 aaKnown RBP16.76■□□□□ 0.27
TRAPPC1-206ENST00000573989 TAF7Q15545 349 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC1-206ENST00000573989 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
TRAPPC1-206ENST00000573989 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
TRAPPC1-206ENST00000573989 KCNQ4P56696 695 aa16.75■□□□□ 0.27
TRAPPC1-206ENST00000573989 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
TRAPPC1-206ENST00000573989 RRP7AQ9Y3A4 280 aaKnown RBP16.75■□□□□ 0.27
TRAPPC1-206ENST00000573989 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
TRAPPC1-206ENST00000573989 APAF1O14727 1248 aa16.74■□□□□ 0.27
TRAPPC1-206ENST00000573989 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
TRAPPC1-206ENST00000573989 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC1-206ENST00000573989 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
TRAPPC1-206ENST00000573989 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
TRAPPC1-206ENST00000573989 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
TRAPPC1-206ENST00000573989 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC1-206ENST00000573989 VSIG10Q8N0Z9 540 aa16.73■□□□□ 0.27
TRAPPC1-206ENST00000573989 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
TRAPPC1-206ENST00000573989 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
TRAPPC1-206ENST00000573989 AK7Q96M32 723 aa16.72■□□□□ 0.27
TRAPPC1-206ENST00000573989 FMNL2Q96PY5 1086 aa16.72■□□□□ 0.27
TRAPPC1-206ENST00000573989 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC1-206ENST00000573989 COL5A3P25940 1745 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC1-206ENST00000573989 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
TRAPPC1-206ENST00000573989 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC1-206ENST00000573989 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.27
TRAPPC1-206ENST00000573989 KCPQ6ZWJ8 1503 aa16.7■□□□□ 0.26
TRAPPC1-206ENST00000573989 ITPK1Q13572 414 aa16.7■□□□□ 0.26
TRAPPC1-206ENST00000573989 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
TRAPPC1-206ENST00000573989 LINC00116Q8NCU8 138 aa16.7■□□□□ 0.26
TRAPPC1-206ENST00000573989 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
TRAPPC1-206ENST00000573989 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 HEG1Q9ULI3 1381 aa16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 NGEFQ8N5V2 710 aa16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 TJP1Q07157 1748 aa16.69■□□□□ 0.26
TRAPPC1-206ENST00000573989 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
TRAPPC1-206ENST00000573989 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
TRAPPC1-206ENST00000573989 STARD3NLO95772 234 aa16.68■□□□□ 0.26
TRAPPC1-206ENST00000573989 MIER1Q8N108 512 aa16.68■□□□□ 0.26
TRAPPC1-206ENST00000573989 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC1-206ENST00000573989 TSPYL4Q9UJ04 414 aa16.68■□□□□ 0.26
TRAPPC1-206ENST00000573989 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
TRAPPC1-206ENST00000573989 GNPATO15228 680 aa16.67■□□□□ 0.26
TRAPPC1-206ENST00000573989 CCDC27Q2M243 656 aa16.67■□□□□ 0.26
TRAPPC1-206ENST00000573989 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
TRAPPC1-206ENST00000573989 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
TRAPPC1-206ENST00000573989 SSFA2P28290 1259 aa16.66■□□□□ 0.26
TRAPPC1-206ENST00000573989 DNAJC10Q8IXB1 793 aa16.66■□□□□ 0.26
TRAPPC1-206ENST00000573989 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
TRAPPC1-206ENST00000573989 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
TRAPPC1-206ENST00000573989 MSH5O43196 834 aa16.65■□□□□ 0.26
TRAPPC1-206ENST00000573989 KCNQ3O43525 872 aa16.65■□□□□ 0.26
TRAPPC1-206ENST00000573989 CRKLP46109 303 aaKnown RBP16.65■□□□□ 0.26
TRAPPC1-206ENST00000573989 SLC16A10Q8TF71 515 aa16.65■□□□□ 0.26
TRAPPC1-206ENST00000573989 LAS1LQ9Y4W2 734 aaKnown RBP16.65■□□□□ 0.26
TRAPPC1-206ENST00000573989 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
TRAPPC1-206ENST00000573989 PNPLA7Q6ZV29 1317 aa16.65■□□□□ 0.26
TRAPPC1-206ENST00000573989 GNAI1P63096 354 aa16.64■□□□□ 0.25
TRAPPC1-206ENST00000573989 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
TRAPPC1-206ENST00000573989 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
TRAPPC1-206ENST00000573989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.63■□□□□ 0.25
TRAPPC1-206ENST00000573989 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
TRAPPC1-206ENST00000573989 PHF14O94880 888 aa16.63■□□□□ 0.25
TRAPPC1-206ENST00000573989 CYP19A1P11511 503 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC1-206ENST00000573989 ADRA2BP18089 450 aa16.63■□□□□ 0.25
TRAPPC1-206ENST00000573989 TRAPPC3LQ5T215 181 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms