RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 BRPF1P55201 1214 aaPredicted RBP18.53■□□□□ 0.56
USP43-202ENST00000570475 KIAA2012Q0VF49 1180 aa18.52■□□□□ 0.56
USP43-202ENST00000570475 TEFQ10587 303 aa18.52■□□□□ 0.56
USP43-202ENST00000570475 PPP1R42Q7Z4L9 355 aa18.52■□□□□ 0.56
USP43-202ENST00000570475 FERMT3Q86UX7 667 aa18.52■□□□□ 0.56
USP43-202ENST00000570475 GADD45BO75293 160 aaPredicted RBP18.52■□□□□ 0.55
USP43-202ENST00000570475 ABCA9Q8IUA7 1624 aa18.51■□□□□ 0.55
USP43-202ENST00000570475 GOLGA6L4A6NEF3 574 aa18.51■□□□□ 0.55
USP43-202ENST00000570475 FOSBP53539 338 aa18.51■□□□□ 0.55
USP43-202ENST00000570475 TAF7Q15545 349 aaPredicted RBP18.51■□□□□ 0.55
USP43-202ENST00000570475 USP25Q9UHP3 1055 aa18.51■□□□□ 0.55
USP43-202ENST00000570475 MBD3O95983 291 aa18.51■□□□□ 0.55
USP43-202ENST00000570475 SIL1Q9H173 461 aa18.51■□□□□ 0.55
USP43-202ENST00000570475 UQCRHLA0A096LP55 91 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 UQCRHP07919 91 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 CHMLP26374 656 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 EDC4Q6P2E9 1401 aaKnown RBP18.5■□□□□ 0.55
USP43-202ENST00000570475 FGD1P98174 961 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 SPC24Q8NBT2 197 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 ZDHHC9Q9Y397 364 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 PTPRMP28827 1452 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 PTCH1Q13635 1447 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 SRCIN1Q9C0H9 1055 aa18.5■□□□□ 0.55
USP43-202ENST00000570475 CCDC83Q8IWF9 413 aa18.49■□□□□ 0.55
USP43-202ENST00000570475 DRC7Q8IY82 874 aa18.49■□□□□ 0.55
USP43-202ENST00000570475 COL3A1P02461 1466 aaPredicted RBP18.49■□□□□ 0.55
USP43-202ENST00000570475 CD163L1Q9NR16 1453 aa18.49■□□□□ 0.55
USP43-202ENST00000570475 RRP9O43818 475 aaKnown RBP18.49■□□□□ 0.55
USP43-202ENST00000570475 NEXMIFQ5QGS0 1516 aa18.49■□□□□ 0.55
USP43-202ENST00000570475 USP48Q86UV5 1035 aa18.49■□□□□ 0.55
USP43-202ENST00000570475 CNPY2Q9Y2B0 182 aa18.49■□□□□ 0.55
USP43-202ENST00000570475 CASTP20810 708 aaKnown RBP18.48■□□□□ 0.55
USP43-202ENST00000570475 LRSAM1Q6UWE0 723 aa18.48■□□□□ 0.55
USP43-202ENST00000570475 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
USP43-202ENST00000570475 IFIT2P09913 472 aaKnown RBP18.48■□□□□ 0.55
USP43-202ENST00000570475 STK3Q13188 491 aa18.48■□□□□ 0.55
USP43-202ENST00000570475 PI4KAP2A4QPH2 592 aa18.47■□□□□ 0.55
USP43-202ENST00000570475 TPM2P07951 284 aa18.47■□□□□ 0.55
USP43-202ENST00000570475 PI4KAP1Q8N8J0 262 aa18.47■□□□□ 0.55
USP43-202ENST00000570475 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
USP43-202ENST00000570475 C17orf53Q8N3J3 647 aaPredicted RBP18.47■□□□□ 0.55
USP43-202ENST00000570475 HECW2Q9P2P5 1572 aa18.47■□□□□ 0.55
USP43-202ENST00000570475 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
USP43-202ENST00000570475 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
USP43-202ENST00000570475 CCDC39Q9UFE4 941 aa18.46■□□□□ 0.55
USP43-202ENST00000570475 MCM2P49736 904 aa18.46■□□□□ 0.55
USP43-202ENST00000570475 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
USP43-202ENST00000570475 PRPF40BQ6NWY9 871 aaKnown RBP18.46■□□□□ 0.55
USP43-202ENST00000570475 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
USP43-202ENST00000570475 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
USP43-202ENST00000570475 PIK3R4Q99570 1358 aa18.46■□□□□ 0.55
USP43-202ENST00000570475 PHF14O94880 888 aa18.45■□□□□ 0.54
USP43-202ENST00000570475 ZNF445P59923 1031 aa18.45■□□□□ 0.54
USP43-202ENST00000570475 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
USP43-202ENST00000570475 PPLO60437 1756 aa18.45■□□□□ 0.54
USP43-202ENST00000570475 NECAB1Q8N987 351 aa18.45■□□□□ 0.54
USP43-202ENST00000570475 PPFIA3O75145 1194 aa18.45■□□□□ 0.54
USP43-202ENST00000570475 JARID2Q92833 1246 aaPredicted RBP18.45■□□□□ 0.54
USP43-202ENST00000570475 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
USP43-202ENST00000570475 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
USP43-202ENST00000570475 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
USP43-202ENST00000570475 ZMYND15Q9H091 742 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 TTC12Q9H892 705 aaPredicted RBP18.44■□□□□ 0.54
USP43-202ENST00000570475 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 NBPF7P0C2Y1 421 aaPredicted RBP18.44■□□□□ 0.54
USP43-202ENST00000570475 CAMK4Q16566 473 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 GIMAP6Q6P9H5 292 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
USP43-202ENST00000570475 RHPN1Q8TCX5 695 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 FRMPD1Q5SYB0 1578 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 TSC1Q92574 1164 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
USP43-202ENST00000570475 PPP1R9BQ96SB3 815 aa18.43■□□□□ 0.54
USP43-202ENST00000570475 ADGRB2O60241 1585 aa18.43■□□□□ 0.54
USP43-202ENST00000570475 ARHGEF40Q8TER5 1519 aa18.43■□□□□ 0.54
USP43-202ENST00000570475 CCDC8Q9H0W5 538 aaPredicted RBP18.43■□□□□ 0.54
USP43-202ENST00000570475 OFD1O75665 1012 aa18.42■□□□□ 0.54
USP43-202ENST00000570475 MED14O60244 1454 aa18.42■□□□□ 0.54
USP43-202ENST00000570475 CEBPZQ03701 1054 aaKnown RBP18.42■□□□□ 0.54
USP43-202ENST00000570475 USP44Q9H0E7 712 aa18.42■□□□□ 0.54
USP43-202ENST00000570475 FAM173BQ6P4H8 233 aa18.41■□□□□ 0.54
USP43-202ENST00000570475 IL25Q9H293 177 aa18.41■□□□□ 0.54
USP43-202ENST00000570475 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
USP43-202ENST00000570475 AACSQ86V21 672 aa18.41■□□□□ 0.54
USP43-202ENST00000570475 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
USP43-202ENST00000570475 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
USP43-202ENST00000570475 HSP90B1P14625 803 aaKnown RBP18.41■□□□□ 0.54
USP43-202ENST00000570475 LTKP29376 864 aa18.41■□□□□ 0.54
USP43-202ENST00000570475 AK2P54819 239 aa18.41■□□□□ 0.54
USP43-202ENST00000570475 VIRMAQ69YN4 1812 aaKnown RBP18.41■□□□□ 0.54
USP43-202ENST00000570475 KCNQ3O43525 872 aa18.4■□□□□ 0.54
USP43-202ENST00000570475 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
USP43-202ENST00000570475 ZKSCAN5Q9Y2L8 839 aa18.4■□□□□ 0.54
USP43-202ENST00000570475 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
USP43-202ENST00000570475 ZNF530Q6P9A1 599 aaPredicted RBP18.4■□□□□ 0.54
USP43-202ENST00000570475 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
USP43-202ENST00000570475 PIK3C2BO00750 1634 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms