RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 AKAP4Q5JQC9 854 aa12.8□□□□□ -0.36
HCCAT5-201ENST00000569990 MPRIPQ6WCQ1 1025 aa12.8□□□□□ -0.36
HCCAT5-201ENST00000569990 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
HCCAT5-201ENST00000569990 ITGB4P16144 1822 aa12.79□□□□□ -0.36
HCCAT5-201ENST00000569990 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
HCCAT5-201ENST00000569990 PIGBQ92521 554 aa12.79□□□□□ -0.36
HCCAT5-201ENST00000569990 PHACTR3Q96KR7 559 aa12.79□□□□□ -0.36
HCCAT5-201ENST00000569990 GAS2L2Q8NHY3 880 aa12.78□□□□□ -0.36
HCCAT5-201ENST00000569990 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
HCCAT5-201ENST00000569990 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
HCCAT5-201ENST00000569990 PALLDQ8WX93 1383 aa12.77□□□□□ -0.37
HCCAT5-201ENST00000569990 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
HCCAT5-201ENST00000569990 LY75O60449 1722 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 ANP32CO43423 234 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 SLC27A3Q5K4L6 730 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 LGR6Q9HBX8 967 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 LRRC4BQ9NT99 713 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 MAP3K5Q99683 1374 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
HCCAT5-201ENST00000569990 RNMTO43148 476 aaKnown RBP12.75□□□□□ -0.37
HCCAT5-201ENST00000569990 MRC1P22897 1456 aa12.75□□□□□ -0.37
HCCAT5-201ENST00000569990 CABP4P57796 275 aa12.75□□□□□ -0.37
HCCAT5-201ENST00000569990 PAPPAQ13219 1627 aa12.75□□□□□ -0.37
HCCAT5-201ENST00000569990 NBPF14Q5TI25 921 aa12.75□□□□□ -0.37
HCCAT5-201ENST00000569990 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
HCCAT5-201ENST00000569990 ASAP1Q9ULH1 1129 aa12.75□□□□□ -0.37
HCCAT5-201ENST00000569990 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
HCCAT5-201ENST00000569990 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
HCCAT5-201ENST00000569990 KCNQ4P56696 695 aa12.74□□□□□ -0.37
HCCAT5-201ENST00000569990 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
HCCAT5-201ENST00000569990 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
HCCAT5-201ENST00000569990 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
HCCAT5-201ENST00000569990 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
HCCAT5-201ENST00000569990 NEFMP07197 916 aa12.73□□□□□ -0.37
HCCAT5-201ENST00000569990 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
HCCAT5-201ENST00000569990 IL17REQ8NFR9 667 aa12.73□□□□□ -0.37
HCCAT5-201ENST00000569990 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
HCCAT5-201ENST00000569990 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
HCCAT5-201ENST00000569990 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
HCCAT5-201ENST00000569990 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
HCCAT5-201ENST00000569990 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
HCCAT5-201ENST00000569990 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
HCCAT5-201ENST00000569990 SIK1P57059 783 aa12.71□□□□□ -0.37
HCCAT5-201ENST00000569990 SLC15A2Q16348 729 aa12.71□□□□□ -0.37
HCCAT5-201ENST00000569990 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
HCCAT5-201ENST00000569990 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
HCCAT5-201ENST00000569990 VIRMAQ69YN4 1812 aaKnown RBP12.71□□□□□ -0.38
HCCAT5-201ENST00000569990 HTATSF1O43719 755 aaKnown RBP12.7□□□□□ -0.38
HCCAT5-201ENST00000569990 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
HCCAT5-201ENST00000569990 ZNF827Q17R98 1081 aa12.7□□□□□ -0.38
HCCAT5-201ENST00000569990 RTF1Q92541 710 aaKnown RBP12.7□□□□□ -0.38
HCCAT5-201ENST00000569990 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
HCCAT5-201ENST00000569990 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
HCCAT5-201ENST00000569990 TEFQ10587 303 aa12.69□□□□□ -0.38
HCCAT5-201ENST00000569990 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
HCCAT5-201ENST00000569990 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
HCCAT5-201ENST00000569990 C5P01031 1676 aa12.69□□□□□ -0.38
HCCAT5-201ENST00000569990 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
HCCAT5-201ENST00000569990 ITPK1Q13572 414 aa12.68□□□□□ -0.38
HCCAT5-201ENST00000569990 DCTN1Q14203 1278 aa12.68□□□□□ -0.38
HCCAT5-201ENST00000569990 MCM10Q7L590 875 aa12.68□□□□□ -0.38
HCCAT5-201ENST00000569990 CCDC146Q8IYE0 955 aa12.68□□□□□ -0.38
HCCAT5-201ENST00000569990 SIPA1L3O60292 1781 aaPredicted RBP12.68□□□□□ -0.38
HCCAT5-201ENST00000569990 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 SLC39A6Q13433 755 aa12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 KCPQ6ZWJ8 1503 aa12.67□□□□□ -0.38
HCCAT5-201ENST00000569990 DLG5Q8TDM6 1919 aa12.66□□□□□ -0.38
HCCAT5-201ENST00000569990 C4BP0C0L5 1744 aa12.66□□□□□ -0.38
HCCAT5-201ENST00000569990 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
HCCAT5-201ENST00000569990 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
HCCAT5-201ENST00000569990 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
HCCAT5-201ENST00000569990 CASZ1Q86V15 1759 aa12.66□□□□□ -0.38
HCCAT5-201ENST00000569990 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
HCCAT5-201ENST00000569990 RIPK4P57078 832 aa12.65□□□□□ -0.38
HCCAT5-201ENST00000569990 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
HCCAT5-201ENST00000569990 TFCP2L1Q9NZI6 479 aa12.65□□□□□ -0.38
HCCAT5-201ENST00000569990 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
HCCAT5-201ENST00000569990 CICQ96RK0 1608 aaPredicted RBP12.65□□□□□ -0.38
HCCAT5-201ENST00000569990 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
HCCAT5-201ENST00000569990 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
HCCAT5-201ENST00000569990 BTBD11A6QL63 1104 aa12.64□□□□□ -0.39
HCCAT5-201ENST00000569990 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
HCCAT5-201ENST00000569990 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
HCCAT5-201ENST00000569990 TJP1Q07157 1748 aa12.64□□□□□ -0.39
HCCAT5-201ENST00000569990 TUBGCP6Q96RT7 1819 aa12.64□□□□□ -0.39
HCCAT5-201ENST00000569990 COL5A3P25940 1745 aaPredicted RBP12.63□□□□□ -0.39
HCCAT5-201ENST00000569990 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
HCCAT5-201ENST00000569990 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
HCCAT5-201ENST00000569990 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
HCCAT5-201ENST00000569990 AK7Q96M32 723 aa12.63□□□□□ -0.39
HCCAT5-201ENST00000569990 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms