RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
SMG1-217ENST00000569764 PNISRQ8TF01 805 aaKnown RBP8.26□□□□□ -1.09
SMG1-217ENST00000569764 TEX13AQ9BXU3 409 aaPredicted RBP8.26□□□□□ -1.09
SMG1-217ENST00000569764 ZNF652Q9Y2D9 606 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 TTC36A6NLP5 189 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 WDR78Q5VTH9 848 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 MORC4Q8TE76 937 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 MRRFQ96E11 262 aaKnown RBP8.26□□□□□ -1.09
SMG1-217ENST00000569764 CREB3O43889 395 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 NKX1-1Q15270 411 aaPredicted RBP8.26□□□□□ -1.09
SMG1-217ENST00000569764 TSHZ1Q6ZSZ6 1077 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 ZNF513Q8N8E2 541 aaPredicted RBP8.26□□□□□ -1.09
SMG1-217ENST00000569764 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 ASXL1Q8IXJ9 1541 aa8.26□□□□□ -1.09
SMG1-217ENST00000569764 LONRF3Q496Y0 759 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 CABP2Q9NPB3 220 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 ERBB3P21860 1342 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 IL2RBP14784 551 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 SSFA2P28290 1259 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 DDX54Q8TDD1 881 aaKnown RBP8.25□□□□□ -1.09
SMG1-217ENST00000569764 SPDYE4A6NLX3 237 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 SEMA3EO15041 775 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 AMOTQ4VCS5 1084 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 DRC1Q96MC2 740 aa8.25□□□□□ -1.09
SMG1-217ENST00000569764 DIP2AQ14689 1571 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 ZPR1O75312 459 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 MYBPC2Q14324 1141 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 CARD14Q9BXL6 1004 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 KRI1Q8N9T8 703 aaKnown RBP8.24□□□□□ -1.09
SMG1-217ENST00000569764 IVNS1ABPQ9Y6Y0 642 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 MED14O60244 1454 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 KTN1Q86UP2 1357 aaKnown RBP8.24□□□□□ -1.09
SMG1-217ENST00000569764 PPFIA4O75335 1185 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 PIK3R5Q8WYR1 880 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 CCDC87Q9NVE4 849 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 TMOD3Q9NYL9 352 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 ANKARQ7Z5J8 1434 aa8.24□□□□□ -1.09
SMG1-217ENST00000569764 WAPLQ7Z5K2 1190 aa8.23□□□□□ -1.09
SMG1-217ENST00000569764 QRICH2Q9H0J4 1663 aa8.23□□□□□ -1.09
SMG1-217ENST00000569764 POM121Q96HA1 1249 aa8.23□□□□□ -1.09
SMG1-217ENST00000569764 ARHGEF28Q8N1W1 1705 aaKnown RBP8.23□□□□□ -1.09
SMG1-217ENST00000569764 SPATA31A3Q5VYP0 1347 aa8.23□□□□□ -1.09
SMG1-217ENST00000569764 FAM83GA6ND36 823 aa8.23□□□□□ -1.09
SMG1-217ENST00000569764 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
SMG1-217ENST00000569764 ZNF280DQ6N043 979 aa8.23□□□□□ -1.09
SMG1-217ENST00000569764 STARD3NLO95772 234 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 NUTM2GQ5VZR2 741 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 ORAI2Q96SN7 254 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 KIAA1522Q9P206 1035 aaPredicted RBP8.22□□□□□ -1.09
SMG1-217ENST00000569764 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 NBPF11Q86T75 865 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 SPOCK2Q92563 424 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 GOLGA6CA6NDK9 693 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 GOLGA6BA6NDN3 693 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 GOLGA6DP0CG33 693 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 KCNA1Q09470 495 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 AIDAQ96BJ3 306 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 METTL14Q9HCE5 456 aaKnown RBP8.22□□□□□ -1.09
SMG1-217ENST00000569764 GOLGA6AQ9NYA3 693 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 RPS6KL1Q9Y6S9 549 aa8.22□□□□□ -1.09
SMG1-217ENST00000569764 CABP4P57796 275 aa8.21□□□□□ -1.09
SMG1-217ENST00000569764 RHBDL3P58872 404 aa8.21□□□□□ -1.09
SMG1-217ENST00000569764 SOGA3Q5TF21 947 aa8.21□□□□□ -1.09
SMG1-217ENST00000569764 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.09
SMG1-217ENST00000569764 ZFYVE9O95405 1425 aa8.21□□□□□ -1.09
SMG1-217ENST00000569764 SETBP1Q9Y6X0 1596 aa8.21□□□□□ -1.09
SMG1-217ENST00000569764 G3BP2Q9UN86 482 aaKnown RBP8.21□□□□□ -1.09
SMG1-217ENST00000569764 GOLGA2Q08379 1002 aa8.21□□□□□ -1.1
SMG1-217ENST00000569764 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
SMG1-217ENST00000569764 CTDP1Q9Y5B0 961 aaPredicted RBP8.21□□□□□ -1.1
SMG1-217ENST00000569764 KDM5AP29375 1690 aaKnown RBP8.21□□□□□ -1.1
SMG1-217ENST00000569764 U2SURPO15042 1029 aaKnown RBP8.21□□□□□ -1.1
SMG1-217ENST00000569764 YY1P25490 414 aa8.21□□□□□ -1.1
SMG1-217ENST00000569764 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.1
SMG1-217ENST00000569764 BLMP54132 1417 aaPredicted RBP8.21□□□□□ -1.1
SMG1-217ENST00000569764 MYBBP1AQ9BQG0 1328 aaKnown RBP8.2□□□□□ -1.1
SMG1-217ENST00000569764 STK10O94804 968 aaKnown RBP8.2□□□□□ -1.1
SMG1-217ENST00000569764 ZCRB1Q8TBF4 217 aaKnown RBP8.2□□□□□ -1.1
SMG1-217ENST00000569764 YTHDC2Q9H6S0 1430 aaKnown RBP8.2□□□□□ -1.1
SMG1-217ENST00000569764 GCP02774 474 aa8.2□□□□□ -1.1
SMG1-217ENST00000569764 RFC4P35249 363 aa8.2□□□□□ -1.1
SMG1-217ENST00000569764 SREK1Q8WXA9 508 aaKnown RBP8.2□□□□□ -1.1
SMG1-217ENST00000569764 PMM1Q92871 262 aa8.2□□□□□ -1.1
SMG1-217ENST00000569764 CABP1Q9NZU7 370 aa8.2□□□□□ -1.1
SMG1-217ENST00000569764 SETD1AO15047 1707 aaKnown RBP8.2□□□□□ -1.1
SMG1-217ENST00000569764 TULP4Q9NRJ4 1543 aa8.2□□□□□ -1.1
SMG1-217ENST00000569764 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 RBM42Q9BTD8 480 aaKnown RBP8.19□□□□□ -1.1
SMG1-217ENST00000569764 WWC3Q9ULE0 1092 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 ATF5Q9Y2D1 282 aaPredicted RBP8.19□□□□□ -1.1
SMG1-217ENST00000569764 ACEP12821 1306 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 FLIIQ13045 1269 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 CCDC96Q2M329 555 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 CXorf38Q8TB03 319 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 SLC12A5Q9H2X9 1139 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 ZBED9Q6R2W3 1325 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 PARNO95453 639 aaKnown RBP8.19□□□□□ -1.1
SMG1-217ENST00000569764 RFX1P22670 979 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 ZKSCAN2Q63HK3 967 aa8.19□□□□□ -1.1
SMG1-217ENST00000569764 FRMD4BQ9Y2L6 1034 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms