RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CCDC27Q2M243 656 aa21.96■■□□□ 1.11
COMMD4-224ENST00000568877 NGEFQ8N5V2 710 aa21.96■■□□□ 1.11
COMMD4-224ENST00000568877 BTAF1O14981 1849 aa21.95■■□□□ 1.1
COMMD4-224ENST00000568877 PLSCR1O15162 318 aa21.95■■□□□ 1.1
COMMD4-224ENST00000568877 BAG6P46379 1132 aa21.95■■□□□ 1.1
COMMD4-224ENST00000568877 TAF7Q15545 349 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-224ENST00000568877 ATG3Q9NT62 314 aa21.95■■□□□ 1.1
COMMD4-224ENST00000568877 ASAP1Q9ULH1 1129 aa21.95■■□□□ 1.1
COMMD4-224ENST00000568877 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-224ENST00000568877 KAT6BQ8WYB5 2073 aa21.95■■□□□ 1.1
COMMD4-224ENST00000568877 VIRMAQ69YN4 1812 aaKnown RBP21.94■■□□□ 1.1
COMMD4-224ENST00000568877 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
COMMD4-224ENST00000568877 SOCS7O14512 581 aa21.93■■□□□ 1.1
COMMD4-224ENST00000568877 DEFB132Q7Z7B7 95 aa21.93■■□□□ 1.1
COMMD4-224ENST00000568877 BTBD11A6QL63 1104 aa21.92■■□□□ 1.1
COMMD4-224ENST00000568877 EN1Q05925 392 aaPredicted RBP21.92■■□□□ 1.1
COMMD4-224ENST00000568877 WWC1Q8IX03 1113 aa21.92■■□□□ 1.1
COMMD4-224ENST00000568877 PALLDQ8WX93 1383 aa21.91■■□□□ 1.1
COMMD4-224ENST00000568877 CALD1Q05682 793 aaKnown RBP21.91■■□□□ 1.1
COMMD4-224ENST00000568877 SLC39A6Q13433 755 aa21.91■■□□□ 1.1
COMMD4-224ENST00000568877 SIPA1L3O60292 1781 aaPredicted RBP21.9■■□□□ 1.1
COMMD4-224ENST00000568877 CAMKK2Q96RR4 588 aa21.9■■□□□ 1.1
COMMD4-224ENST00000568877 EZH2Q15910 746 aaKnown RBP21.89■■□□□ 1.09
COMMD4-224ENST00000568877 ZNF790Q6PG37 636 aa21.89■■□□□ 1.09
COMMD4-224ENST00000568877 MIS18AQ9NYP9 233 aa21.89■■□□□ 1.09
COMMD4-224ENST00000568877 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
COMMD4-224ENST00000568877 PROM2Q8N271 834 aa21.88■■□□□ 1.09
COMMD4-224ENST00000568877 BABAM1Q9NWV8 329 aa21.88■■□□□ 1.09
COMMD4-224ENST00000568877 TXNRD1Q16881 649 aa21.87■■□□□ 1.09
COMMD4-224ENST00000568877 WDR63Q8IWG1 891 aa21.87■■□□□ 1.09
COMMD4-224ENST00000568877 LAS1LQ9Y4W2 734 aaKnown RBP21.87■■□□□ 1.09
COMMD4-224ENST00000568877 KCNQ3O43525 872 aa21.86■■□□□ 1.09
COMMD4-224ENST00000568877 PTCD1O75127 700 aaKnown RBP21.86■■□□□ 1.09
COMMD4-224ENST00000568877 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
COMMD4-224ENST00000568877 RBM42Q9BTD8 480 aaKnown RBP21.86■■□□□ 1.09
COMMD4-224ENST00000568877 TSPYL4Q9UJ04 414 aa21.86■■□□□ 1.09
COMMD4-224ENST00000568877 PAPPAQ13219 1627 aa21.86■■□□□ 1.09
COMMD4-224ENST00000568877 RGPD3A6NKT7 1758 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-224ENST00000568877 RGPD4Q7Z3J3 1758 aa21.85■■□□□ 1.09
COMMD4-224ENST00000568877 LOC102724428A0A0B4J2F2 783 aa21.85■■□□□ 1.09
COMMD4-224ENST00000568877 CHL1O00533 1208 aa21.85■■□□□ 1.09
COMMD4-224ENST00000568877 SIK1P57059 783 aa21.85■■□□□ 1.09
COMMD4-224ENST00000568877 HNRNPUQ00839 825 aaKnown RBP eCLIP21.85■■□□□ 1.09
COMMD4-224ENST00000568877 SLC27A3Q5K4L6 730 aa21.85■■□□□ 1.09
COMMD4-224ENST00000568877 IFT57Q9NWB7 429 aa21.85■■□□□ 1.09
COMMD4-224ENST00000568877 CCNL1Q9UK58 526 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-224ENST00000568877 ZNF521Q96K83 1311 aa21.84■■□□□ 1.09
COMMD4-224ENST00000568877 ZNF853P0CG23 659 aa21.84■■□□□ 1.09
COMMD4-224ENST00000568877 GNAI1P63096 354 aa21.84■■□□□ 1.09
COMMD4-224ENST00000568877 IL16Q14005 1332 aa21.83■■□□□ 1.09
COMMD4-224ENST00000568877 ZNF496Q96IT1 587 aaPredicted RBP21.83■■□□□ 1.09
COMMD4-224ENST00000568877 KCPQ6ZWJ8 1503 aa21.83■■□□□ 1.09
COMMD4-224ENST00000568877 LY75O60449 1722 aa21.83■■□□□ 1.08
COMMD4-224ENST00000568877 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
COMMD4-224ENST00000568877 KCNQ4P56696 695 aa21.82■■□□□ 1.08
COMMD4-224ENST00000568877 FMNL2Q96PY5 1086 aa21.82■■□□□ 1.08
COMMD4-224ENST00000568877 SLC4A9Q96Q91 983 aa21.82■■□□□ 1.08
COMMD4-224ENST00000568877 LRRC4BQ9NT99 713 aa21.82■■□□□ 1.08
COMMD4-224ENST00000568877 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
COMMD4-224ENST00000568877 VSIG10Q8N0Z9 540 aa21.8■■□□□ 1.08
COMMD4-224ENST00000568877 MBIPQ9NS73 344 aa21.8■■□□□ 1.08
COMMD4-224ENST00000568877 KDM3BQ7LBC6 1761 aa21.79■■□□□ 1.08
COMMD4-224ENST00000568877 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
COMMD4-224ENST00000568877 HEG1Q9ULI3 1381 aa21.79■■□□□ 1.08
COMMD4-224ENST00000568877 ITPK1Q13572 414 aa21.79■■□□□ 1.08
COMMD4-224ENST00000568877 HMGB2P26583 209 aaKnown RBP21.78■■□□□ 1.08
COMMD4-224ENST00000568877 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
COMMD4-224ENST00000568877 RREB1Q92766 1687 aa21.77■■□□□ 1.08
COMMD4-224ENST00000568877 SPINK5Q9NQ38 1064 aaPredicted RBP21.77■■□□□ 1.08
COMMD4-224ENST00000568877 ZNF831Q5JPB2 1677 aa21.76■■□□□ 1.07
COMMD4-224ENST00000568877 SNRPA1P09661 255 aaKnown RBP21.76■■□□□ 1.07
COMMD4-224ENST00000568877 DNAJC10Q8IXB1 793 aa21.76■■□□□ 1.07
COMMD4-224ENST00000568877 TSR2Q969E8 191 aaKnown RBP21.76■■□□□ 1.07
COMMD4-224ENST00000568877 LINC00116Q8NCU8 138 aa21.75■■□□□ 1.07
COMMD4-224ENST00000568877 TEX13AQ9BXU3 409 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-224ENST00000568877 GIGYF1O75420 1035 aaPredicted RBP21.74■■□□□ 1.07
COMMD4-224ENST00000568877 MYH16Q9H6N6 1097 aa21.74■■□□□ 1.07
COMMD4-224ENST00000568877 NUP188Q5SRE5 1749 aa21.73■■□□□ 1.07
COMMD4-224ENST00000568877 PRAMEF22A3QJZ6 481 aa21.73■■□□□ 1.07
COMMD4-224ENST00000568877 E9PSI1 815 aa21.73■■□□□ 1.07
COMMD4-224ENST00000568877 ZBED9Q6R2W3 1325 aa21.73■■□□□ 1.07
COMMD4-224ENST00000568877 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
COMMD4-224ENST00000568877 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
COMMD4-224ENST00000568877 STARD3NLO95772 234 aa21.72■■□□□ 1.07
COMMD4-224ENST00000568877 CYP19A1P11511 503 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-224ENST00000568877 SLFN5Q08AF3 891 aa21.72■■□□□ 1.07
COMMD4-224ENST00000568877 KRT24Q2M2I5 525 aa21.72■■□□□ 1.07
COMMD4-224ENST00000568877 NBPF14Q5TI25 921 aa21.72■■□□□ 1.07
COMMD4-224ENST00000568877 CDCA7LQ96GN5 454 aa21.72■■□□□ 1.07
COMMD4-224ENST00000568877 TJP1Q07157 1748 aa21.72■■□□□ 1.07
COMMD4-224ENST00000568877 USP16Q9Y5T5 823 aa21.71■■□□□ 1.07
COMMD4-224ENST00000568877 C5P01031 1676 aa21.7■■□□□ 1.06
COMMD4-224ENST00000568877 RC3H1Q5TC82 1133 aaKnown RBP21.7■■□□□ 1.06
COMMD4-224ENST00000568877 AKT1S1Q96B36 256 aa21.7■■□□□ 1.06
COMMD4-224ENST00000568877 ANO8Q9HCE9 1232 aaPredicted RBP21.7■■□□□ 1.06
COMMD4-224ENST00000568877 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
COMMD4-224ENST00000568877 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
COMMD4-224ENST00000568877 C8orf58Q8NAV2 365 aa21.69■■□□□ 1.06
COMMD4-224ENST00000568877 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
COMMD4-224ENST00000568877 TAF1LQ8IZX4 1826 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms